Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0052
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04712-2|AAA81902.1|  565|Caenorhabditis elegans unc-87 protein.       32   0.35 
AF106590-6|AAT68897.1|  544|Caenorhabditis elegans Uncoordinated...    32   0.35 
AF106590-5|AAC78234.1|  565|Caenorhabditis elegans Uncoordinated...    32   0.35 
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    30   1.4  
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.       30   1.4  
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr...    30   1.9  
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele...    30   1.9  
AL132853-1|CAB60440.1|  234|Caenorhabditis elegans Hypothetical ...    30   1.9  
AF045645-3|AAC02610.2|  193|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z71260-1|CAA95798.1|  744|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U60113-1|AAB03334.1|  715|Caenorhabditis elegans SEM-4 short for...    29   4.3  
U60112-1|AAB03333.1|  744|Caenorhabditis elegans SEM-4 long form...    29   4.3  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AC025726-14|AAK73912.2|  508|Caenorhabditis elegans Hypothetical...    28   5.7  
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ...    27   9.9  

>U04712-2|AAA81902.1|  565|Caenorhabditis elegans unc-87 protein.
          Length = 565

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 156 ETKFQAQPDPSPQYYYDNNEQP 221
           ETK      P P YYYDN EQP
Sbjct: 175 ETKIPTIVSPHPVYYYDNQEQP 196


>AF106590-6|AAT68897.1|  544|Caenorhabditis elegans Uncoordinated
           protein 87, isoform c protein.
          Length = 544

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 156 ETKFQAQPDPSPQYYYDNNEQP 221
           ETK      P P YYYDN EQP
Sbjct: 154 ETKIPTIVSPHPVYYYDNQEQP 175


>AF106590-5|AAC78234.1|  565|Caenorhabditis elegans Uncoordinated
           protein 87, isoform a protein.
          Length = 565

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 156 ETKFQAQPDPSPQYYYDNNEQP 221
           ETK      P P YYYDN EQP
Sbjct: 175 ETKIPTIVSPHPVYYYDNQEQP 196


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +3

Query: 309  PWETESKFTKTAE-STYTSTPTWSQTLXXXXXXXXXXXXXXTGSQEWPKTNTLGRSRPLS 485
            P++  S FT T   ST T+TP    T+               G+   P T     + P +
Sbjct: 2012 PFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPSTPGAGTTGTPGTGPTVTAAPTN 2071

Query: 486  SYAKNEPILERTRG 527
              +  +PI+  T+G
Sbjct: 2072 GISTTQPIITTTKG 2085


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +3

Query: 309  PWETESKFTKTAE-STYTSTPTWSQTLXXXXXXXXXXXXXXTGSQEWPKTNTLGRSRPLS 485
            P++  S FT T   ST T+TP    T+               G+   P T     + P +
Sbjct: 2012 PFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPSTPGAGTTGTPGTGPTVTAAPTN 2071

Query: 486  SYAKNEPILERTRG 527
              +  +PI+  T+G
Sbjct: 2072 GISTTQPIITTTKG 2085


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
            protein Y16B4A.2 protein.
          Length = 2105

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +3

Query: 309  PWETESKFTKTAE-STYTSTPTWSQTLXXXXXXXXXXXXXXTGSQEWPKTNTLGRSRPLS 485
            P++  S FT T   ST T+TP    T+               G+   P T     + P +
Sbjct: 2012 PFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPSTPGAGTTGTPGTGPTVTAAPTN 2071

Query: 486  SYAKNEPILERTRG 527
              +  +PI+  T+G
Sbjct: 2072 GISTTQPIITTTKG 2085


>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +3

Query: 66  EQSKQSGRKTYYSEYERRYIS-VPESTYIPTETKFQAQPDPSPQYYYDNNEQPEPVEHQ 239
           +Q +Q  ++  + + ++ Y   + +  Y P   +FQAQ  P    Y+   +Q +PV++Q
Sbjct: 45  QQPQQFQQQPQFQQQQQNYQQFLAQQQYQP---QFQAQQQPQQPQYFQPQQQQQPVQYQ 100


>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
          Length = 1815

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 32/155 (20%), Positives = 55/155 (35%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           +S V P  ++ + +      Y S  E RY +   S  +P +       +P  +Y YD N 
Sbjct: 310 ESAVPPAASSSRRQFDQVYGYASSSEERYDTPMSSGRLPRDEPILEHSEP--EYVYDQNG 367

Query: 216 QPEPVEHQWRKELREFXXXXXXXXXXXXVKPPWETESKFTKTAESTYTSTPTWSQTLXXX 395
            PE   +       E              + P +  + +  + +  Y     W+++    
Sbjct: 368 YPEEDNYGINPTYSEDHFEGQTNDYSTTHQEPNDFRNDYNSSYQREY-----WNESEPLS 422

Query: 396 XXXXXXXXXXXTGSQEWPKTNTLGRSRPLSSYAKN 500
                      TG+  W + +T   SRP SS A N
Sbjct: 423 YNSRPPNGHIRTGANTWREPST--SSRPTSSQAWN 455


>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical protein
            F02A9.6 protein.
          Length = 1295

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 126  SVPESTYIPTETKFQAQPDPSPQYYYDNNEQPEPVEHQW 242
            S P   Y PT T    + + SP+Y + N+E   PV   W
Sbjct: 1225 SSPSPHYYPTTTSTPNRMETSPEYMF-NHEMAPPVNAMW 1262


>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical protein
            F02A9.6 protein.
          Length = 1295

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 126  SVPESTYIPTETKFQAQPDPSPQYYYDNNEQPEPVEHQW 242
            S P   Y PT T    + + SP+Y + N+E   PV   W
Sbjct: 1225 SSPSPHYYPTTTSTPNRMETSPEYMF-NHEMAPPVNAMW 1262


>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.elegans
            glp-1 gene,complete cds. ).
          Length = 1295

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 126  SVPESTYIPTETKFQAQPDPSPQYYYDNNEQPEPVEHQW 242
            S P   Y PT T    + + SP+Y + N+E   PV   W
Sbjct: 1225 SSPSPHYYPTTTSTPNRMETSPEYMF-NHEMAPPVNAMW 1262


>AL132853-1|CAB60440.1|  234|Caenorhabditis elegans Hypothetical
           protein Y80D3A.3 protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 562 SPSSLEHPPVQSHT-LIPAPHGTYHNPNVPNYHSRASTETREQA 690
           SPSS  HP V  H   IP P    H+ +    H RA +E R  A
Sbjct: 109 SPSSFPHPMVAHHAGFIPPPPSFLHHQH--QQHPRAPSEKRRGA 150


>AF045645-3|AAC02610.2|  193|Caenorhabditis elegans Hypothetical
           protein K02D7.2 protein.
          Length = 193

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 352 HTHQRPLGVKLCGRALGVKGALKGNSLDPKSGQKR 456
           HT ++P G + CGR    +  L+ + L   SG+K+
Sbjct: 118 HTGEKPFGCEFCGRCFADRSNLRAH-LQTHSGEKK 151


>Z71260-1|CAA95798.1|  744|Caenorhabditis elegans Hypothetical
           protein F15C11.1 protein.
          Length = 744

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 352 HTHQRPLGVKLCGRALGVKGALK 420
           HT +RP   K+C RA   KG LK
Sbjct: 327 HTGERPFKCKICQRAFTTKGNLK 349


>U60113-1|AAB03334.1|  715|Caenorhabditis elegans SEM-4 short form
           protein.
          Length = 715

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 352 HTHQRPLGVKLCGRALGVKGALK 420
           HT +RP   K+C RA   KG LK
Sbjct: 298 HTGERPFKCKICQRAFTTKGNLK 320


>U60112-1|AAB03333.1|  744|Caenorhabditis elegans SEM-4 long form
           protein.
          Length = 744

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 352 HTHQRPLGVKLCGRALGVKGALK 420
           HT +RP   K+C RA   KG LK
Sbjct: 327 HTGERPFKCKICQRAFTTKGNLK 349


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 114  RRYISVPESTYIPTETKFQAQPDPSPQYYYDNNEQPEPV 230
            R+ + VP        T         P+YYYD  E PE +
Sbjct: 2272 RKTVMVPRKVRKMKSTTTTTTTPAEPEYYYDEEEYPEVI 2310


>AC025726-14|AAK73912.2|  508|Caenorhabditis elegans Hypothetical
           protein Y71G12B.13 protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 105 EYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNEQPEPVEHQ 239
           E  R   S P     P  ++FQ +P+P   +  + +E+PE  EHQ
Sbjct: 375 ETARSLTSTPSPAPAPA-SQFQQEPEPVQFHVGNYDEEPEYQEHQ 418


>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
           protein Y102A11A.3 protein.
          Length = 1571

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/60 (26%), Positives = 23/60 (38%)
 Frame = +3

Query: 36  QSFVKPVNAAEQSKQSGRKTYYSEYERRYISVPESTYIPTETKFQAQPDPSPQYYYDNNE 215
           Q  + P    E  KQ     +  +Y  + +  P S Y+P ET         PQ   DN +
Sbjct: 337 QPILPPNVKMESEKQEDEANF--DYSLQSVPEPSSAYLPHETDQNQSSTSFPQQESDNED 394


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,128,107
Number of Sequences: 27780
Number of extensions: 305928
Number of successful extensions: 1236
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)