Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0051
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 31 0.13
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 31 0.17
SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9 |Schiz... 29 0.51
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 29 0.68
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 29 0.89
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 28 1.2
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 28 1.2
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 28 1.6
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 28 1.6
SPCC4G3.05c |mus81||Holliday junction resolvase subunit Mus81|Sc... 27 2.1
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 2.1
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.1
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 27 2.1
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 27 2.7
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 27 2.7
SPAC3G6.06c |rad2|fen1|FEN-1 endonuclease|Schizosaccharomyces po... 27 3.6
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 3.6
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 3.6
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 27 3.6
SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase |Schizosaccha... 27 3.6
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 27 3.6
SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein L21|Sch... 26 4.8
SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein L21|Sc... 26 4.8
SPAC11D3.03c |||meiotic chromosome segregation protein|Schizosac... 26 4.8
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 26 6.3
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 6.3
SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9 |Schizos... 25 8.3
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 25 8.3
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 25 8.3
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 25 8.3
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 8.3
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 8.3
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 25 8.3
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 25 8.3
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 31.5 bits (68), Expect = 0.13
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 127 KTFD-KDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRA 303
+T+D KD +W PI+P + K P+K N ++ +L +NK + +K+
Sbjct: 118 RTYDTKDGFVAWNTLDDDFRPIVPDQERSRKINPQKGN-NNNLLKENKSLKTTAKDLSDI 176
Query: 304 SESPSKK 324
S S KK
Sbjct: 177 SSSSMKK 183
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 31.1 bits (67), Expect = 0.17
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 160 GKPLGLPSPI-MPPNQHD-SKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTP 333
G PL P P+ M P+ D S++TP + + T+ + + ++ ++ + S S+ TP
Sbjct: 467 GMPLQSPLPVSMKPSADDHSRATPTRSVEAPTLPSYAPRHPTQANGSRYMNPSTSRM-TP 525
Query: 334 APVYMELTYVPH 369
YM+ Y PH
Sbjct: 526 QSPYMQNYYRPH 537
>SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 702
Score = 29.5 bits (63), Expect = 0.51
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 199 NQHDS--KSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELT 357
++HD KS P+K NP+ +L KL + + S K P+P + E T
Sbjct: 57 SEHDDFVKSVPRKNNPTD-LLYSGKLLDSDEPPSVHGNSSKVPSKHPSPSFPETT 110
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 29.1 bits (62), Expect = 0.68
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 196 PNQHDSK-STPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTP 333
P++ +K S P ++NP + K+N+ + KE ++ +E+ KK++P
Sbjct: 644 PSEEAAKLSLPSRKNPFVSDSAVLKVNKPEMKEGQKKAEARKKKESP 690
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 28.7 bits (61), Expect = 0.89
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 148 IESWG-KPLGLPSPIMPPNQHDSKSTPKKQNPSSTILN--KNKLNQEKSKEAKRASESPS 318
I +W KP L SP++ N ++ KQ S T + N LN K A +S
Sbjct: 738 INAWANKPAALKSPLIKKNIQQAELAQNKQQSSVTTASPRSNALNANTPKAAAPSSNVTM 797
Query: 319 KKKT 330
K T
Sbjct: 798 KNVT 801
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 151 ESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASE 309
ES+ P+ LPS + P D + +NP ++N+ + + + K E
Sbjct: 7 ESFSYPMLLPSDGLYPEDDDDADMDQDKNPEENVMNEKEDEDVDAVDEKSGEE 59
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 199 NQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
N+ D+KS P + N ++ KN+ +K + + +P K K
Sbjct: 126 NETDTKSLPVEANNDNSARKKNEYEMKKKGAQSKQTNAPKKGK 168
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 348 GANLRSSSRQLILLCRGILQTSPRTLL 428
GAN S RQLI L R +L TS R LL
Sbjct: 1360 GANFSSGQRQLICLAR-VLLTSTRILL 1385
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Frame = +1
Query: 181 SPIMPPNQHDSKS---TPKKQ-NPSSTILNKN-----KLNQEKSKEAKRASESPSKKKTP 333
SP PP+Q + S +PK Q + ++ N+ ++ ++SKE K++ + P + P
Sbjct: 158 SPSFPPSQSHTSSYDQSPKGQLRDNISVPNQQDGLDPEVFNQQSKETKKSLQVPPSRNVP 217
Query: 334 APVYMELTYVP 366
PV Y P
Sbjct: 218 PPVTRPNQYNP 228
>SPCC4G3.05c |mus81||Holliday junction resolvase subunit
Mus81|Schizosaccharomyces pombe|chr 3|||Manual
Length = 608
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 217 STPKKQNPSSTILNKNKLNQEKSKEAKRASESPS--KKKTPAPVYMELTY 360
ST +QN S +N NK + E S E R+ + P+ K+K P Y Y
Sbjct: 80 STHNEQNDSH--VNANKSSSETSSEKPRSVKKPTTRKRKVYVPSYRSGAY 127
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 145 PIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNK 267
P + GK L + + P++H+S S KKQ S +++ K
Sbjct: 637 PTSTIGKALQRVASVTSPSRHNSDSKEKKQTKSPSLVKTLK 677
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 208 DSKSTPK-KQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
DSKST +QN +S+ + K N K K AKRA + +KKK
Sbjct: 27 DSKSTNAVEQNNNSSQASVTKDN--KKKAAKRAKKKAAKKK 65
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 430 VFSGTEPSKEIYNALLDAKKTWEDKDLEVTIIPTYDTDV 546
+ E S +Y + AKK +DKD+ +TI D DV
Sbjct: 639 IIPALESSHAVYGGMELAKKLPKDKDIVITISGRGDKDV 677
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 145 PIESWGKPLGLPSPI---MPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRAS 306
P++ +P+ LP PI PP+ SKST ++ + ++ L+ K + S
Sbjct: 174 PVQYSTQPVSLPQPIAAPAPPSAESSKSTISDEDVAWQLIRLGALSSNSVKSSPSKS 230
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 112 FEQSSKTFDKDPIESWGKPLGLP-SPIMPPNQHDSKSTPKKQ--NPSSTILNKNKLNQEK 282
+E++S DP++ GKPL + P + +D P KQ + S +I +N E
Sbjct: 74 YEETSGLTVGDPVQRTGKPLSVELGPGLAETIYDGIQRPLKQIFDKSQSIYIPRGINTES 133
Query: 283 SKEAKRASESPSK 321
+ +P+K
Sbjct: 134 LNREHKWDFTPNK 146
>SPAC3G6.06c |rad2|fen1|FEN-1 endonuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 109 RFEQSSKTFDKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSS 246
R E++SKT + ++S+ KP +PS P SK + K++ S+
Sbjct: 328 RLEKASKTIPQGRLDSFFKP--VPSSPKKPVDTKSKGSAKRKRDSN 371
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 348 GANLRSSSRQLILLCRGILQTSPRTLL 428
GANL S RQL+ L R +L T R LL
Sbjct: 1358 GANLSSGQRQLMCLTRALL-TPTRVLL 1383
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 3.6
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = +1
Query: 184 PIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSK-----EAKRASESPSKKKTPAPVYM 348
P PP + K+ P ++ +S+ LNK + + KSK K S+ + P
Sbjct: 635 PASPPVGTELKTRPTLRSVASSPLNKEPIGKRKSKRDIFGRQKVLPTGISEGLSNIPAKE 694
Query: 349 ELTYVPHHGNSYYSAVEFFKRVRARYYVFSGTEPSKEIYNALLDAKK 489
+ HG + + ++RY+V GT S Y++L DA +
Sbjct: 695 AIKTADCHG-WMRKRSDRYGVWKSRYFVLKGTRLS--YYHSLNDASE 738
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Frame = +1
Query: 397 EFFKRVRARYYVFSGTEPSKEIYNALLDAKKT----------WEDKDLEVTIIPTY 534
+F+K + +Y + SG K IYN K T WE K ++T P Y
Sbjct: 671 QFYKELTQKYSLESGNSSLKPIYNFCETGKVTPQIYFAPQEVWEIKGAQITSSPAY 726
>SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +2
Query: 176 YLVRLCRQISMTAKVLRKNKIPALQF 253
YLVR+C+++ K +++++P + F
Sbjct: 225 YLVRICQEVKQHLKKKKRDEVPMIVF 250
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 463 YNALLDAKKTWEDKDLEVTIIPTYDTDVLGYWVTEN--EEALEKYKIDLSPSASRCTIN 633
+N + +K W E + T D ++ Y ++ EEA +Y + PS CTIN
Sbjct: 138 HNNKVYTEKDWNPITYEEAL--TTDNGIVAYCASKKLAEEAAREYVKEKKPSYDICTIN 194
>SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 160
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 253 LNKNKLNQEKSKEAKRASESPSKKKTPAP 339
L++ K N+ K KEAK ++ ++ PAP
Sbjct: 106 LDRVKANEAKRKEAKAQGKTVQLRRQPAP 134
>SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 253 LNKNKLNQEKSKEAKRASESPSKKKTPAP 339
L++ K N+ K KEAK ++ ++ PAP
Sbjct: 106 LDRVKANEAKRKEAKAQGKTVQLRRQPAP 134
>SPAC11D3.03c |||meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 289 EAKRASESPSKKKTPAPVYMELTYVPHHGNSYYSAVEFFKRV 414
E +S+ P K K P + Y PH G+ Y+ E + R+
Sbjct: 6 ELASSSQKPEKTKYNLPKPLP-AYYPHPGSPLYADKELYARI 46
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 406 KRVRARYYVFSGTEPSKEIYNALLDAKKTWEDKDLEV 516
+ V + + T P+K+ NA+LDA K KDL +
Sbjct: 446 QEVSSNKRLIPSTPPTKKPINAVLDAAKNSAAKDLHL 482
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 199 NQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAK--RASESPSKKKT 330
N H +S P KQ + L +++ E K R +PSK+ T
Sbjct: 673 NHHRKESIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPT 718
>SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 532
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 454 KEIYNALLDAKKTWEDKDLEVTII 525
K +YN L+ K TW+ EVTI+
Sbjct: 52 KMVYNDELEDKDTWKRLQREVTIL 75
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 104 VEDFLL*LEDVSVDFLVSVLMSFNVMLSPRADSC 3
+EDF LED ++DF + F +L+P+ +C
Sbjct: 105 LEDFKA-LEDETIDFTSLPCLIFETLLNPKLFTC 137
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 214 KSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELTYVPHHGNSYYSA 393
+ + + Q P+ + ++ + N K + RASE+ KT + +YVP + + SA
Sbjct: 495 RQSSQSQQPAWNVSSRYQ-NNSKVQTTSRASENADTNKTQHNIKYIDSYVPEYSIARQSA 553
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 395 WNSS-NESAHVIMFSPELNLRKKFTTPFLTPKRLG 496
W+S N +AH+ +F N PFL P ++G
Sbjct: 1719 WSSELNSNAHLELFMNFYNFSNSHWEPFLEPWKVG 1753
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 164 FPQDSIGSLSKVLLLCSNLSVED 96
FP G+L+ +L +C+NL+ ED
Sbjct: 193 FPSQRPGALAYLLRVCNNLAEED 215
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.4 bits (53), Expect = 8.3
Identities = 21/103 (20%), Positives = 39/103 (37%)
Frame = +1
Query: 166 PLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVY 345
P PSP + +QH STP ++ + +++ S SP +P +
Sbjct: 175 PSHSPSPFLQSSQHIPPSTPAQKLRKKNNFDSFRISNSHISPFASGSFSPFATSSPNFLS 234
Query: 346 MELTYVPHHGNSYYSAVEFFKRVRARYYVFSGTEPSKEIYNAL 474
P+ N+ S + F + + + S PS ++L
Sbjct: 235 TSTPAPPNSNNANPSTL--FSSIPSSRHTTSNHFPSNSAQSSL 275
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +1
Query: 394 VEFFKRVRARYYVFSGTEPSKEIYNALLDAKKTWEDKDLEVTIIPTYDTDVLGYWVTENE 573
+E +R+ R + + + L K + D+E IP YD Y + E+E
Sbjct: 183 IELMRRLAPRVNIIPAIAKADSLTAQELQTTKEMINADIEYYKIPVYD---FPYDIEEDE 239
Query: 574 EAL 582
EA+
Sbjct: 240 EAI 242
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 175 LPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
LP DSK P+K+ + + +++ EK ++ + SPSK++
Sbjct: 349 LPDASSQATPADSKE-PRKEEAEKPVTSATEVSSEKVEKVDGNTSSPSKEE 398
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,864,847
Number of Sequences: 5004
Number of extensions: 59660
Number of successful extensions: 315
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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