Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0051
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0430 - 25153572-25154060 36 0.043
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 32 0.40
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 31 0.93
03_02_0507 - 8999902-9000649,9001106-9001225,9001314-9001394,900... 31 0.93
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 31 0.93
11_06_0610 - 25449085-25453284 31 1.2
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 30 1.6
01_06_0780 - 31938064-31938127,31940191-31941743 30 1.6
03_05_0519 - 25131614-25134778 30 2.2
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458... 30 2.2
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 29 2.8
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 29 3.8
03_02_0384 - 7972067-7972162,7972776-7972985,7973083-7973286,797... 29 3.8
01_06_1030 - 33942841-33943790,33944748-33944811 29 3.8
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 3.8
12_02_1261 + 27410921-27413401 29 5.0
12_01_0322 - 2451062-2451601,2451691-2451792,2452237-2452329,245... 29 5.0
08_02_1256 + 25645085-25645396 29 5.0
02_02_0666 - 12757555-12757688,12757968-12758029,12758156-127582... 29 5.0
06_02_0229 - 13282048-13282554,13282585-13282719 28 6.6
09_01_0180 + 2632507-2634870 28 8.7
08_02_0258 + 14968858-14970648 28 8.7
06_03_0750 - 24140988-24141037,24141108-24141345,24142158-241422... 28 8.7
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 28 8.7
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 28 8.7
>04_04_0430 - 25153572-25154060
Length = 162
Score = 35.5 bits (78), Expect = 0.043
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 142 DPIESWGKPLGLPSPIMPPNQHDSKSTP---KKQNPSSTILNKNKLNQEKSKEA-KRASE 309
+P+ +P+ P +PP SKS P KK + N N N++K +EA K A+
Sbjct: 21 NPLSKEKEPVAYRKPPVPPAAWPSKSAPAPKKKNDDKKKKNNNNSKNKKKPQEAGKGAAN 80
Query: 310 SPSKKKTPAPVYMELT 357
+ + K P+ V E T
Sbjct: 81 AAAGNKKPSAVKKEDT 96
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 190 MPPNQHDSKSTPKKQNPS--STILNKNKLN---QEKSKEAKRASESPSKKKTPAP 339
+PP Q + ++PK +PS +++ NK+ ++ +K+ R SP +K P+P
Sbjct: 213 LPPQQQRAAASPKALHPSPKRDVVDHNKVGPSAEKATKQQPRKPASPQRKPAPSP 267
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 31.1 bits (67), Expect = 0.93
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +1
Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKT-PAPVYMEL 354
PSP PP+ +S P++ P + + L + +A + SP+K+ PAP ++
Sbjct: 577 PSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQA--SPTSPTKQHAPPAPPSVQT 634
Query: 355 T-YVPHHG--NSYYSAVEFFK-RVRARYYVFSGTEPSKEIYNALLDAKKT 492
+ P S Y E K + + + F +E KE+ N L D++K+
Sbjct: 635 SPPTPQSALLISTYDPKEIDKDKEKFMFSAFRNSEKRKELANVLSDSQKS 684
>03_02_0507 -
8999902-9000649,9001106-9001225,9001314-9001394,
9001591-9001613
Length = 323
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 196 PNQHDSKSTPKKQNPSSTILNKNKLNQEKSKE-AKRASESPSKKKTPAPVYMELTYVPHH 372
P+QH K T +KQN + ++++ + ++K +S K+ TP+ V M +Y
Sbjct: 71 PSQHSGKETRRKQNNQLSESSEDERDGRRTKHTVDSPDDSQQKQHTPSRVGMHNSYSKDG 130
Query: 373 GNS 381
NS
Sbjct: 131 MNS 133
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 166 PLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKK 324
P G+P+ P KS P Q+PS +L KNK Q++ + K + KK
Sbjct: 721 PHGIPTGSSPVGSVP-KSFPPFQHPSHQLLEKNKFQQQRYNKFKNRCIAERKK 772
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 181 SPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTP 333
SP +PP H S TP++ PS K+ +EKS +SP + P
Sbjct: 749 SPPIPPTSHTSPPTPEEYTPSPP---KSSPPEEKSPPPHSPEKSPPSEAHP 796
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 NPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
NPS TI K K ++K K+ K+ + KKK
Sbjct: 365 NPSKTIKRKKKKKKKKKKKKKKKKKKKKKKK 395
>01_06_0780 - 31938064-31938127,31940191-31941743
Length = 538
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +1
Query: 112 FEQSSKTFDKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKE 291
+ S + +P + PLGL P+ PP Q D ++ SS + L+ +S+
Sbjct: 315 YNLSDDVLNLEPADPVPPPLGLAPPVPPPPQGDDPDGSGSESDSSVVSCPATLSTGESQR 374
Query: 292 AKRASESPS 318
+ + P+
Sbjct: 375 VRGSLPRPA 383
>03_05_0519 - 25131614-25134778
Length = 1054
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 208 DSKSTPKK-QNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMEL 354
D K +P+K + + K E KE SPSK P+P MEL
Sbjct: 223 DKKKSPEKGKKDGEKPKEEGKAKDETKKEVAPVPPSPSKAPPPSPSKMEL 272
>03_04_0204 -
18444903-18445054,18445445-18445676,18445765-18445836,
18446201-18446347,18446559-18446614,18446727-18446832,
18446938-18447025,18447112-18447230,18448975-18449580,
18449803-18449898,18450232-18450422,18453287-18453416,
18453531-18453566
Length = 676
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = +1
Query: 193 PPNQHDSKSTPKKQNP-----SSTILNKNKLNQEKSKEAKRASESPSKKK 327
PP +H +K P Q P S T K Q+K +A +S PS KK
Sbjct: 346 PPTEHTNKIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSPPPSSKK 395
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/64 (25%), Positives = 26/64 (40%)
Frame = +1
Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELT 357
PSP D++S KQ P + N K K +E +KK + +++
Sbjct: 542 PSPSSTEPGTDTESCTNKQGPVAAEENNKKCCPRKQASMALGTEIEERKKELLKLMLQMK 601
Query: 358 YVPH 369
+PH
Sbjct: 602 NIPH 605
>06_03_0097 -
16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +1
Query: 139 KDPIESWGKPLGL---PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASE 309
+D +ES GK LGL P PPN TP N N+ + ++ KE + A +
Sbjct: 778 EDFLESLGKELGLDVPPEKPTPPNVLFRSETPSTANAIGISRNRKAITCQEIKENESALD 837
Query: 310 SPSKKKTPAPV 342
A V
Sbjct: 838 KEEIANASADV 848
>03_02_0384 -
7972067-7972162,7972776-7972985,7973083-7973286,
7973381-7973497,7973692-7973810,7974001-7974341,
7974492-7974646,7974948-7975109,7975262-7975321
Length = 487
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 178 PSPIMPPNQHDS-KSTPKKQNPSS-TILNKNKLNQEKSKEAKRASESPSKKKTPA 336
PSP++ P Q D KS P++ N S T+L SK ++ + KT A
Sbjct: 323 PSPVLAPKQQDQLKSEPQEDNHSKPTVLGHPYSTPHVSKSNQKRRQRGDDSKTCA 377
>01_06_1030 - 33942841-33943790,33944748-33944811
Length = 337
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 227 FGVLLLSC*FGGIIGLGRPRGFPQDSIGSLSKVLLLCSNLSVEDFLL*LEDVSV 66
FG+LL C G+ G+G G +++ S KV+ L ++ D L D +V
Sbjct: 11 FGLLLCGCSVSGVEGIGVNYGMIGNNLPSPDKVIALYRASNITDIRLFHPDTTV 64
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/104 (19%), Positives = 42/104 (40%)
Frame = +1
Query: 145 PIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKK 324
P++SWG G P++ P S+ + +S+ + + + S + K+ + +
Sbjct: 70 PVQSWGTAPGQNVPLVQPGHQPMSSSATMPSINSSETSSSDWQEHTSADGKKYYYNKKTR 129
Query: 325 KTPAPVYMELTYVPHHGNSYYSAVEFFKRVRARYYVFSGTEPSK 456
++ EL ++ EF + +YY T+ SK
Sbjct: 130 QSSWEKPAELMTPLERADASTEWKEFTTQEGRKYYYNKVTKQSK 173
>12_02_1261 + 27410921-27413401
Length = 826
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 208 DSKSTPKKQNPSSTILNKNKLNQEKSK 288
D K+TP Q+ ++TI NK ++KSK
Sbjct: 217 DDKATPHHQDSATTISKSNKRERKKSK 243
>12_01_0322 -
2451062-2451601,2451691-2451792,2452237-2452329,
2452443-2452589,2453063-2453150,2453338-2453426,
2453698-2453763,2453962-2454076,2454269-2454462
Length = 477
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 196 PNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTP 333
PN+ + +T + NP IL +N + ++K+ E +E P
Sbjct: 313 PNKQNPLATVMESNPPQLILPQNMIEEDKASEPFSQAEGAESDNVP 358
>08_02_1256 + 25645085-25645396
Length = 103
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 166 PLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKL 270
PL P P PP Q + +S P +P+ LN + L
Sbjct: 69 PLPSPPPPPPPQQQEEQSPPPLLDPADEFLNLDGL 103
>02_02_0666 -
12757555-12757688,12757968-12758029,12758156-12758223,
12758359-12758490,12759116-12759351,12759451-12759648,
12760123-12760213,12760566-12760710,12760837-12760955
Length = 394
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 662 AAHEVS*SCRFMVQREAEGDRSILYFSKASSFSV 561
A H ++ +CR M+Q+ + GDR L+ + +SFS+
Sbjct: 141 AKHRLA-ACRTMLQKYSLGDRCRLFVADGTSFSI 173
>06_02_0229 - 13282048-13282554,13282585-13282719
Length = 213
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +1
Query: 166 PLGLPSPIMPPN-----QHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKT 330
PL LP+P MP N H + TP+ + P + + +R+ PS
Sbjct: 123 PLALPAPPMPANVLHGQLHREEETPEVRLPGVDGDESDNNSDGSEYYDERSVSPPSPPHL 182
Query: 331 PAPVYMELTY 360
PAPV + Y
Sbjct: 183 PAPVVHQPYY 192
>09_01_0180 + 2632507-2634870
Length = 787
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +1
Query: 178 PSPIMPPNQHDSKSTP-KKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPV 342
PSP PP Q P K NPS + A ++ S+K TP P+
Sbjct: 228 PSPPPPPAQQQQSVPPMSKFNPSPPSPKLVPFSNSPPSSANASAAESSQKVTPTPL 283
>08_02_0258 + 14968858-14970648
Length = 596
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 223 PKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELT 357
P+ + +T+LNK K+ + + AS++ + P P Y+ L+
Sbjct: 247 PRPEQSYTTLLNKKKITAVVNNDDDPASKNATAALPPPPAYVYLS 291
>06_03_0750 -
24140988-24141037,24141108-24141345,24142158-24142232,
24142345-24142413,24142550-24142581,24143503-24143583,
24143791-24143851,24144135-24144275,24144372-24144563
Length = 312
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMEL 354
PSP PP S S+ +K +P+S K K +K K A + + P Y+ +
Sbjct: 41 PSPPPPPPPPPSSSSKRKPDPAS----KGKAAAKKGKTAASGEDGGDGGEDEKPAYVHV 95
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 369 SRQLILLCRGILQTSPRTLLCFLRN*TFERNLQRPS*RQKDLGG 500
S+Q + + L + RTL C L N E ++ P Q +GG
Sbjct: 331 SKQFVHMLNSTLTATERTLCCILENFQRENGVEVPKALQPYMGG 374
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 369 SRQLILLCRGILQTSPRTLLCFLRN*TFERNLQRPS*RQKDLGG 500
S+Q + + L + RTL C L N E ++ P Q +GG
Sbjct: 372 SKQFVHMLNSTLTATERTLCCILENFQKENGVEVPKALQPYMGG 415
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,722,189
Number of Sequences: 37544
Number of extensions: 384940
Number of successful extensions: 1361
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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