Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0051
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical p... 33 0.21
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.48
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 32 0.48
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.84
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 1.9
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 2.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 2.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.6
AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.4
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 3.4
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 29 4.5
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 4.5
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 29 4.5
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 4.5
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 4.5
AL132841-6|CAB60331.2| 494|Caenorhabditis elegans Hypothetical ... 29 4.5
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 4.5
U67949-1|AAL06028.2| 633|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical pr... 28 7.8
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL032645-1|CAA21674.1| 123|Caenorhabditis elegans Hypothetical ... 28 7.8
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 28 7.8
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 28 7.8
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 28 7.8
AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical protein
C36A4.5 protein.
Length = 954
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 325 KTPAPVYMELTYVPHHGNSYYSAV-----EFFKRVRARYYVFSGTEPSKEIYNALLDAKK 489
K P Y ++ VP + S EF +VR+R + S E S E A+L K+
Sbjct: 829 KFARPYYFDVVTVPRYEKLETSVEADGLQEFISKVRSRNVILSSKEISGEQLQAILRGKQ 888
Query: 490 TWEDKDLEVTIIPTYDTDVLGYWVTENEE 576
TW D+ +IPT+ + +L + +NEE
Sbjct: 889 TWCDRAHPCNVIPTHSSPMLHDFRQKNEE 917
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical protein
F32A7.5a protein.
Length = 878
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Frame = +1
Query: 292 AKRASESPSKK-KTPAPVYMELTYVPHHGNSYYSAV-----EFFKRVRARYYVFSGTEPS 453
A S +P+K K P Y ++ VP + S EF +VR+R + + + S
Sbjct: 741 AAPGSAAPAKPVKFARPYYFDVVTVPRNEKLETSVAADGLQEFISKVRSRNVILASKDIS 800
Query: 454 KEIYNALLDAKKTWEDKDLEVTIIPTYDTDVLGYWVTENEEALEKYKIDLS 606
E A+L K+TW D +IPT+ + +L + +NEE + S
Sbjct: 801 GEQLQAILCGKQTWCDSAHPCNVIPTHSSPMLLDFRQKNEEQFAANNLQFS 851
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical protein
F25D7.4 protein.
Length = 932
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 325 KTPAPVYMELTYVPHHGNSYYSAV-----EFFKRVRARYYVFSGTEPSKEIYNALLDAKK 489
K P Y ++ VP + S EF +VR+R + + E S E ++L K+
Sbjct: 807 KFARPYYFDVVTVPRNEKLETSVEADGLQEFISKVRSRNVILASKEISGEQLQSILRGKQ 866
Query: 490 TWEDKDLEVTIIPTYDTDVLGYWVTENEE 576
TW D+ +IPT+ + +L + +NEE
Sbjct: 867 TWCDRAHPCNVIPTHSSPMLHDFRQKNEE 895
>Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical
protein C47E12.11 protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 190 MPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKK 324
+PP S S K+Q+ ST +KNK EKSK+ K +KK
Sbjct: 55 LPPRSASSNS--KRQSAGSTAKSKNKTKSEKSKKTKSRGVHVAKK 97
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 208 DSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
DSK KK++ ++NK + EK KE K+ E P K++
Sbjct: 123 DSKRDEKKKDGEKKEDDENKEDNEKKKEEKKEDEKPKKEE 162
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +1
Query: 115 EQSSKTFDKDPIESWGKPLGLPSPIMPPN-QHDSKSTPK----KQNPSSTILNKNKLNQE 279
E SK D + S+ KP +P P + + D+K PK + P S L K+
Sbjct: 1121 ETDSKLADMIGVTSFHKP---DTPSRPDSGKKDAKVIPKTGQVESEPYSPTLEKSLEAAL 1177
Query: 280 KSKEAKRASESPSKKKTPAPVYMEL 354
+ AKR E P KTP P+ EL
Sbjct: 1178 LIEMAKRGIELPLSPKTPIPIATEL 1202
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +1
Query: 109 RFEQSSKTFDKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTI-LNKNKLNQEKS 285
RF + T P+ES P + P H + STP +NP + I L+ +
Sbjct: 623 RFTAPTTTTTSKPVESTTTEEDTPEHVPPAIVHMTASTPSGKNPPTYIPLHPETSQSTPT 682
Query: 286 KEAKRASESPSKKKTPAPVYMELTYVPHHGN 378
S P+ T P + P GN
Sbjct: 683 PTTSARSTRPTASVTRRPEFPTRNTPPFGGN 713
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 519 GHFQIFILPSLFGVKKGVVNFFRRFSSGENIITC 418
GH IF+L F +K +NFF+ SGE+ + C
Sbjct: 83 GHPVIFLLLKYFFLKHQKINFFKDCDSGEDELNC 116
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 519 GHFQIFILPSLFGVKKGVVNFFRRFSSGENIITC 418
GH IF+L F +K +NFF+ SGE+ + C
Sbjct: 83 GHPVIFLLLKYFFLKHQKINFFKDCDSGEDELNC 116
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +1
Query: 118 QSSKTFDKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAK 297
Q+ T K+P++ W P P SK T K+ PS + K+ ++S + K
Sbjct: 509 QAPATPVKNPVKKWRPPW---EDDETPADDVSKPTDAKKTPS--LAKKDPAPAKESLKPK 563
Query: 298 RASESPSKKKTPAP 339
+++P+K + P+P
Sbjct: 564 ADTKAPAKPRDPSP 577
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 208 DSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAP 339
D + K+ SS I NK K + S E + ESP KKKT +P
Sbjct: 372 DEEEEVVKKKKSSKI-NKRKAKESSSDEEEEVEESP-KKKTKSP 413
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 199 NQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKK 324
N +S TP +Q+PS + + ++ + K+ ++ +SP+KK
Sbjct: 228 NLDNSIETPPQQSPSGSSMVSHESDSSSKKDDTKSDKSPTKK 269
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 199 NQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKK 324
N +S TP +Q+PS + + ++ + K+ ++ +SP+KK
Sbjct: 296 NLDNSIETPPQQSPSGSSMVSHESDSSSKKDDTKSDKSPTKK 337
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 196 PNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
P Q + KS PKK + + T+ + + EKS ++K ++ P +KK
Sbjct: 10137 PQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSK--TKEPKEKK 10178
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 196 PNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
P Q + KS PKK + + T+ + + EKS ++K ++ P +KK
Sbjct: 10157 PQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSK--TKEPKEKK 10198
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 196 PNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327
P Q + KS PKK + + T+ + + EKS ++K ++ P +KK
Sbjct: 10157 PQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSK--TKEPKEKK 10198
>AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical
protein F43C11.9 protein.
Length = 339
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +1
Query: 136 DKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQ-------EKSKEA 294
D +P+ + KP LPSP P ++ ++++ + P+S ++++Q +K+A
Sbjct: 211 DLEPLTA--KPAKLPSPRQPESKPSNEASSSQLEPTSASQPPSRVDQILKSRSGLPTKDA 268
Query: 295 KRASE-SPSKKKTPAPVY 345
+SE +P K+K +P +
Sbjct: 269 DSSSEVAPRKRKPKSPAF 286
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 121 SSKTFDKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKR 300
S + D+ PI+ GKP P QH + P +Q ++ + + +NQ +
Sbjct: 33 SDDSDDEPPIQISGKPASTAKPTSGSPQHHPQ--PIEQATTNPSVTSSLINQHNRVGNNQ 90
Query: 301 ASESPSKKKTP 333
SPS +P
Sbjct: 91 GHRSPSPTSSP 101
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAP 339
P +PP + + K P+ K ++ KS A R SPS+ K+PAP
Sbjct: 402 PKREIPPARRRRSPSASKSPPAP----KRAKSRSKSPPAPRRRRSPSQSKSPAP 451
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 181 SPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAP 339
SP + + K ++ S + + KS A R SPSK ++PAP
Sbjct: 350 SPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAP 402
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +1
Query: 190 MPPNQHDSKSTPKKQNPSSTILNKNKLNQEKS----KEAKRASESPSKKKT 330
MPP ++ST + +N S ++ K KS K A++AS+SP++ +T
Sbjct: 1 MPPKLR-ARSTSRSRNAVSAPSSEKKTKMSKSPSPAKSARKASKSPARART 50
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYME 351
PSPI P +QH S+++ + ++++L+ KL S A+ +S + S+ +P P E
Sbjct: 72 PSPISPVSQH-SRASSRHDIDNTSLLSILKL----SHVARESSRNTSRNNSPQPAGRE 124
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 367 HHGNSYYSAVEFFKRVRARYYVFSGTEPSKEIYNALLDAKKTWEDKDLEVTI 522
H NSY V F K R + + G + I+NA + + ED +TI
Sbjct: 139 HASNSYQKCVRFDKSSRGKIFATGGADGHIRIWNAQIVFRAENEDAQPILTI 190
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 121 SSKTFDKDP-IESWGKPLG-LPS-PIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKS 285
+ K + DP + S +P G +PS MPP++ S T +P S+ KNK + KS
Sbjct: 109 AQKVYSNDPRLVSIPRPAGTIPSLGSMPPSRSGSIITGPNPSPPSSQKRKNKNKESKS 166
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Frame = +1
Query: 217 STPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELTYVPHHGNSYYSAV 396
STPK S +++ +NQ + + R S S+ + PV + +
Sbjct: 251 STPKPSRQSEDVIDGKPMNQPILRSSLRTEASGSRTEEATPVKQSRVTLSPEVEKKLAEQ 310
Query: 397 EFFKRVRARYY------VFSGTEPSKEIYNALLDAKKTWEDK 504
+ K R ++Y G++ I +ALLDA+ D+
Sbjct: 311 DERKSERRKHYDKNPGRFARGSDRKSRITDALLDARDRIADQ 352
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Frame = +1
Query: 217 STPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELTYVPHHGNSYYSAV 396
STPK S +++ +NQ + + R S S+ + PV + +
Sbjct: 215 STPKPSRQSEDVIDGKPMNQPILRSSLRTEASGSRTEEATPVKQSRVTLSPEVEKKLAEQ 274
Query: 397 EFFKRVRARYY------VFSGTEPSKEIYNALLDAKKTWEDK 504
+ K R ++Y G++ I +ALLDA+ D+
Sbjct: 275 DERKSERRKHYDKNPGRFARGSDRKSRITDALLDARDRIADQ 316
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Frame = +1
Query: 217 STPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELTYVPHHGNSYYSAV 396
STPK S +++ +NQ + + R S S+ + PV + +
Sbjct: 251 STPKPSRQSEDVIDGKPMNQPILRSSLRTEASGSRTEEATPVKQSRVTLSPEVEKKLAEQ 310
Query: 397 EFFKRVRARYY------VFSGTEPSKEIYNALLDAKKTWEDK 504
+ K R ++Y G++ I +ALLDA+ D+
Sbjct: 311 DERKSERRKHYDKNPGRFARGSDRKSRITDALLDARDRIADQ 352
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Frame = +1
Query: 217 STPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMELTYVPHHGNSYYSAV 396
STPK S +++ +NQ + + R S S+ + PV + +
Sbjct: 251 STPKPSRQSEDVIDGKPMNQPILRSSLRTEASGSRTEEATPVKQSRVTLSPEVEKKLAEQ 310
Query: 397 EFFKRVRARYY------VFSGTEPSKEIYNALLDAKKTWEDK 504
+ K R ++Y G++ I +ALLDA+ D+
Sbjct: 311 DERKSERRKHYDKNPGRFARGSDRKSRITDALLDARDRIADQ 352
>AL132841-6|CAB60331.2| 494|Caenorhabditis elegans Hypothetical
protein Y15E3A.3 protein.
Length = 494
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 166 PLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVY 345
PL +P+P +PP +K T KK+ + K K K+K +K E P KK+ P
Sbjct: 85 PLPVPTPEVPP----AKKTTKKKGKLQALKKKKK----KTKSSKIKVE-PKKKEKVVPEI 135
Query: 346 ME 351
+E
Sbjct: 136 VE 137
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 KPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQE-KSKEAKRASESPSKKKTPAP 339
KP P P PN K P K KL E K K + P+ K P P
Sbjct: 224 KPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNP 283
Query: 340 VYMELTYVPHH 372
+ EL P H
Sbjct: 284 M-PELKPKPKH 293
>U67949-1|AAL06028.2| 633|Caenorhabditis elegans Hypothetical
protein F55A4.10 protein.
Length = 633
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 202 QHDSKSTPKKQNPSSTILNKNKLNQEKSKEA--KRASESPSKKKTPAP 339
+H +S + P +I+ K+ E K + +R S SKKKTPAP
Sbjct: 379 RHLFRSPAARNFPDLSIVIKSDSTNENDKTSGRRRPSVKISKKKTPAP 426
>Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical
protein C34E11.1 protein.
Length = 483
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 124 SKTFDKDPIESWGKPLGLPSP-IMPPNQHDSKSTPKKQN 237
SK+F DPI + P G PS + PP SK+ P+ +
Sbjct: 283 SKSFFDDPIPAIPPPSGAPSNYVAPPLSPVSKNAPRNMD 321
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 220 TPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPA 336
TPKK S+ I++ L K + + + SPSKK A
Sbjct: 391 TPKKSKKSAKIIHHAALPPNMMKTSSKPNPSPSKKTQKA 429
>AL032645-1|CAA21674.1| 123|Caenorhabditis elegans Hypothetical
protein Y67A6A.1 protein.
Length = 123
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 208 DSKSTPKKQNPSSTILNKNKLN-----QEKSKEAKRASESPSKK 324
D K T K + S+ ++K++ + ++KSKEAK A E KK
Sbjct: 15 DKKKTSKTKKKSNLSISKSQTSVDMNEKDKSKEAKEAKELKEKK 58
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 478 DAKKTWEDKDLEVTIIPTYDTDVLGYWVTENEEALEK 588
D +TW DKD +T Y T+ G+W E E +K
Sbjct: 333 DEVQTWGDKDHPITRFKKYITE-RGWWNEEKEMEWQK 368
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 478 DAKKTWEDKDLEVTIIPTYDTDVLGYWVTENEEALEK 588
D +TW DKD +T Y T+ G+W E E +K
Sbjct: 332 DEVQTWGDKDHPITRFKKYITE-RGWWNEEKEMEWQK 367
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/72 (20%), Positives = 28/72 (38%)
Frame = +1
Query: 127 KTFDKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRAS 306
KT P +P P P PP H+++ N T K ++ + K +
Sbjct: 291 KTLSTQPPRRTPQPHPKPPPPPPPPIHEAQPEVSDSNKLGTTAASRKDCEQSDENCKTPT 350
Query: 307 ESPSKKKTPAPV 342
+P++ + A +
Sbjct: 351 SAPAESSSTAGI 362
>AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical
protein Y5H2B.3 protein.
Length = 182
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 199 NQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRAS-ESPSKKKTPAP 339
++ ++K KK+ K ++N+EKS+E K+ S + S +K AP
Sbjct: 91 HEQEAKDLIKKEKSEQKKEAKEQVNKEKSEEKKKESVKRKSSEKLEAP 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,757,270
Number of Sequences: 27780
Number of extensions: 328709
Number of successful extensions: 1536
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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