BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NRPG0051 (725 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g60320.1 68416.m06742 expressed protein contains Pfam profile... 36 0.036 At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate syntha... 34 0.11 At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 33 0.19 At5g41950.1 68418.m05108 expressed protein 32 0.34 At5g13860.1 68418.m01620 tumour susceptibility gene 101 (TSG101)... 31 0.59 At1g61690.1 68414.m06958 tetratricopeptide repeat (TPR)-containi... 31 0.78 At5g26210.1 68418.m03119 PHD finger family protein contains Pfam... 30 1.4 At5g02390.1 68418.m00162 expressed protein ; expression supporte... 30 1.4 At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR... 30 1.8 At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR... 30 1.8 At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.8 At1g07110.1 68414.m00756 fructose-6-phosphate 2-kinase / fructos... 30 1.8 At1g45230.1 68414.m05193 defective chloroplasts and leaves prote... 29 2.4 At3g59370.1 68416.m06621 expressed protein hypothetical protein ... 29 3.1 At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 29 4.1 At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 29 4.1 At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 29 4.1 At1g32640.1 68414.m04026 basic helix-loop-helix (bHLH) protein (... 29 4.1 At4g34412.1 68417.m04888 expressed protein 28 5.5 At4g22360.1 68417.m03232 SWIB complex BAF60b domain-containing p... 28 5.5 At2g42900.1 68415.m05314 expressed protein 28 5.5 At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA... 28 7.2 At5g24620.1 68418.m02908 thaumatin-like protein, putative simila... 28 7.2 At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 28 7.2 At3g28790.1 68416.m03593 expressed protein 28 7.2 At3g28770.1 68416.m03591 expressed protein 28 7.2 At5g41320.1 68418.m05022 expressed protein 27 9.6 >At3g60320.1 68416.m06742 expressed protein contains Pfam profiles: PF04782: protein of unknown function (DUF632), PF04783: protein of unknown function (DUF630) Length = 796 Score = 35.5 bits (78), Expect = 0.036 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 8/132 (6%) Frame = +1 Query: 166 PLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASES--PSKKKTPAP 339 P PS + PP+ S ++ K+ + ST N+ + Q K + SES S ++ Sbjct: 94 PSPAPSSVYPPSTSPSVASSKQPSVMSTSSNRRRKQQPKPRLPHILSESSPSSSPRSERS 153 Query: 340 VYMELTYVPHHGNSYYSAV-EFFKRVRARYYVFSGTEPSKEIYNALLDAKK-----TWED 501 +M Y + NS YSA V + + P E +N KK + D Sbjct: 154 NFMPNLYPSAYQNSTYSATPSHASSVWNWENFYPPSPPDSEFFNRKAQEKKHNSDNRFND 213 Query: 502 KDLEVTIIPTYD 537 +D E T+ YD Sbjct: 214 EDTE-TVRSEYD 224 >At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate synthase, UDP-forming, putative / trehalose-6-phosphate synthase, putative / UDP-glucose-glucosephosphate glucosyltransferase, putative similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase Length = 942 Score = 33.9 bits (74), Expect = 0.11 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Frame = +1 Query: 193 PPNQ--HDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPS--KKKTPAPVYMELTY 360 PP++ H++ + K + SS N NK +Q + +++ + S + P+P + Sbjct: 839 PPSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISWNV 898 Query: 361 VPHHGNSYYSAVEFFKRVRARYYVFS 438 + G +Y+S R ARY + S Sbjct: 899 LDLKGENYFSCAVGRTRTNARYLLGS 924 >At1g49490.1 68414.m05547 leucine-rich repeat family protein / extensin family protein contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 847 Score = 33.1 bits (72), Expect = 0.19 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +1 Query: 145 PIESWGKPLGLPSPIMP-PNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSK 321 P S KP P P+MP P+ TPK S K K +E + E P + Sbjct: 399 PRTSEPKP-SKPEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQ 457 Query: 322 KKTPAP 339 K++P P Sbjct: 458 KESPKP 463 >At5g41950.1 68418.m05108 expressed protein Length = 565 Score = 32.3 bits (70), Expect = 0.34 Identities = 14/55 (25%), Positives = 27/55 (49%) Frame = +1 Query: 172 GLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPA 336 G P P +S S P + NP+ ++N+ ++N E+ + +R ++K A Sbjct: 161 GTPHSSASPFSRESASQPAENNPAMDLINRIQVNDEEGRSRQRVLAFAARKYASA 215 >At5g13860.1 68418.m01620 tumour susceptibility gene 101 (TSG101) family protein similar to SP|Q99816 Tumor susceptibility gene 101 protein {Homo sapiens}; contains Pfam profile PF05743: Tumour susceptibility gene 101 protein (TSG101) Length = 368 Score = 31.5 bits (68), Expect = 0.59 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Frame = +1 Query: 454 KEIYNALLDAKKTWEDKDLEVTIIPTYDTDVLGYWVTENEEALEKYKIDLSPSAS-RCTI 630 +EI N + E + ++ +I +TDVLG W+ EN+ + +DL S C Sbjct: 234 EEINNGFKEMVIEKETLEQQLQVI-AMNTDVLGSWIRENQGKAKDLLVDLDVDDSFECID 292 Query: 631 NLQDHETSCAAYRL 672 +L C A L Sbjct: 293 SLSKQMLECTALDL 306 >At1g61690.1 68414.m06958 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain Length = 1155 Score = 31.1 bits (67), Expect = 0.78 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +1 Query: 163 KPLGLPSPIMPP--NQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKT 330 K +GL +P+ PP ++ D+ K NP N+N NQE+S+ +R K T Sbjct: 1069 KAIGLDNPVNPPPVSKTDTTQAAAKPNPVKE-SNRNTNNQERSQLEERIKAEKVKAVT 1125 >At5g26210.1 68418.m03119 PHD finger family protein contains Pfam domain, PF00628: PHD-finger Length = 255 Score = 30.3 bits (65), Expect = 1.4 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +1 Query: 220 TPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAP 339 T KKQ + ++ N N+ KS +KR SES +K P P Sbjct: 140 TAKKQGKDKSSVSNNSSNRSKSS-SKRGSESRAKFSKPEP 178 >At5g02390.1 68418.m00162 expressed protein ; expression supported by MPSS Length = 835 Score = 30.3 bits (65), Expect = 1.4 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +1 Query: 166 PLGLPSP-IMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKK 324 P G+P P I ++ D +S + + PSS + +K N + + K E SKK Sbjct: 66 PDGIPVPKIKLEDKTDVESVQRPKKPSSAVKSKESSNSGEKTKKKHNPEEKSKK 119 >At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1068 Score = 29.9 bits (64), Expect = 1.8 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 77 LLVTAKSLRRKDLNKAVKLLTKIRSSLGGNLSAYL 181 L V SLRRK N+ +LL++I SSL N+ L Sbjct: 385 LCVVGASLRRKSKNEWERLLSRIESSLDKNIDNIL 419 >At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1068 Score = 29.9 bits (64), Expect = 1.8 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 77 LLVTAKSLRRKDLNKAVKLLTKIRSSLGGNLSAYL 181 L V SLRRK N+ +LL++I SSL N+ L Sbjct: 385 LCVVGASLRRKSKNEWERLLSRIESSLDKNIDNIL 419 >At3g19020.1 68416.m02415 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 956 Score = 29.9 bits (64), Expect = 1.8 Identities = 19/54 (35%), Positives = 22/54 (40%) Frame = +1 Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAP 339 PSP P S PK+ P S K Q K K ESP K++ P P Sbjct: 446 PSP-KPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESP-KQEAPKP 497 >At1g07110.1 68414.m00756 fructose-6-phosphate 2-kinase / fructose-2,6-bisphosphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098 Length = 744 Score = 29.9 bits (64), Expect = 1.8 Identities = 19/73 (26%), Positives = 31/73 (42%) Frame = +1 Query: 175 LPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPVYMEL 354 +P+P N + + +NP S + + N K A+R SE +P E+ Sbjct: 191 VPAPAPSANSYLVYAADNAENPRSLSASGSFRNDSTPKAAQRNSEDSGVTVDGSPSAKEM 250 Query: 355 TYVPHHGNSYYSA 393 T V ++ YSA Sbjct: 251 TIVVPDSSNIYSA 263 >At1g45230.1 68414.m05193 defective chloroplasts and leaves protein-related / DCL protein-related similar to defective chloroplasts and leaves (DCL) protein SP:Q42463 from [Lycopersicon esculentum] Length = 219 Score = 29.5 bits (63), Expect = 2.4 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = +1 Query: 373 GNSYYSAVEFFKRVRARYYVFSGTEPSKEIYNALLDAKKTWEDKDLEVTI 522 GNS E +R R S E +E N+ D WEDK LEVT+ Sbjct: 60 GNSESYGSELLRRPRIASEESSEEEEEEEEENSEGDEFVDWEDKILEVTV 109 >At3g59370.1 68416.m06621 expressed protein hypothetical protein F12F1.4 - Arabidopsis thaliana, EMBL:AC002131 Length = 95 Score = 29.1 bits (62), Expect = 3.1 Identities = 11/43 (25%), Positives = 25/43 (58%) Frame = +1 Query: 208 DSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPA 336 D++ T + + + ++ + E+ K+A+ +E+P +KKT A Sbjct: 32 DAEKTNEDEEEKAAVITETPTVVEEEKKAEEVTETPEEKKTEA 74 >At5g22650.2 68418.m02647 expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; Length = 223 Score = 28.7 bits (61), Expect = 4.1 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Frame = +1 Query: 178 PSPIMP--PNQHDSKS--TPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPV 342 P PI PN+ SK+ + KK P++ + + +EK K A+ P+KK +PV Sbjct: 120 PEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPV 178 >At5g22650.1 68418.m02646 expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; Length = 306 Score = 28.7 bits (61), Expect = 4.1 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Frame = +1 Query: 178 PSPIMP--PNQHDSKS--TPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPV 342 P PI PN+ SK+ + KK P++ + + +EK K A+ P+KK +PV Sbjct: 203 PEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPV 261 >At1g80810.1 68414.m09481 expressed protein similar to androgen-induced prostate proliferative shutoff associated protein (GI:4559410) [Homo sapiens]; similar to bimD (GI:168025) [Emericella nidulans] Length = 826 Score = 28.7 bits (61), Expect = 4.1 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Frame = +1 Query: 109 RFEQSSKTFDKDPIESWGKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKL---NQE 279 R + K + + ++S G L + SP++ +TPK +P +T ++ KL + Sbjct: 223 RCARKLKPYIIEALKSRGTSLDMYSPVVSSICQSVFNTPKVHSPVNTKEHEEKLDLGHSR 282 Query: 280 KSKEAKRASESPSKKKT 330 K +K +S+ P++ +T Sbjct: 283 KENLSKSSSKRPARHET 299 >At1g32640.1 68414.m04026 basic helix-loop-helix (bHLH) protein (RAP-1) identical to bHLH protein GB:CAA67885 GI:1465368 from [Arabidopsis thaliana] Length = 623 Score = 28.7 bits (61), Expect = 4.1 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = +1 Query: 121 SSKTFDKDPIESWGKP-LGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAK 297 S ++ DP + P + + PI P ++ P PSS+ +K Q ++ + Sbjct: 262 SGLNWNLDPDQGENDPSMWINDPIGTPGSNE----PGNGAPSSSSQLFSKSIQFENGSSS 317 Query: 298 RASESPSKKKTPAPVYMELTYVPHHGNSYYSAVEF 402 +E+P+ TP+PV+ + T P N++ + F Sbjct: 318 TITENPNLDPTPSPVHSQ-TQNPKFNNTFSRELNF 351 >At4g34412.1 68417.m04888 expressed protein Length = 143 Score = 28.3 bits (60), Expect = 5.5 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 430 VFSGTEPSKEIYNALLDAKKTWEDKDLEVTIIP 528 +FSG SKE+ N++LD E L ++IP Sbjct: 16 LFSGVTNSKELLNSMLDGSLKLEVSFLNASLIP 48 >At4g22360.1 68417.m03232 SWIB complex BAF60b domain-containing protein contains Pfam profile PF02201: BAF60b domain of the SWIB complex Length = 385 Score = 28.3 bits (60), Expect = 5.5 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Frame = +1 Query: 145 PIESWGKPLGLPSPI-MPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSK 321 P S+ P P+ MPP QH + +Q SS +L+ +A + S Sbjct: 129 PYHSYDLNFRQPYPVYMPPQQHQHQQQSPRQQQSSVMLSHGGNASLSVNQAPKESAPAGT 188 Query: 322 KKTPAP 339 K+ P Sbjct: 189 KRKGGP 194 >At2g42900.1 68415.m05314 expressed protein Length = 276 Score = 28.3 bits (60), Expect = 5.5 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +2 Query: 398 NSSNESAHVIMFSPELNLRKKFTTPFLTPKRLGRIKIW 511 + ++ +VI SP L RKKF+ + R ++IW Sbjct: 131 SGASHGEYVIRLSPSLTERKKFSNAVESALRRSMVRIW 168 >At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA1) identical to half-molecule ABC transporter ATM3 GI:9964121 from [Arabidopsis thaliana]; almost identical to mitochondrial half-ABC transporter STA1 GI:9187883 from [Arabidopsis thaliana]; identical to cDNA mitochondrial half-ABC transporter (STA1 gene)GI:9187882 Length = 728 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/55 (23%), Positives = 24/55 (43%) Frame = +1 Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKTPAPV 342 P P +P + +S + N S + +N + A + SPS +P+P+ Sbjct: 22 PQPKIPSFSYSLRSDYRLHNGFSNYIRRNSIRTSPVINAFLSDNSPSPSPSPSPI 76 >At5g24620.1 68418.m02908 thaumatin-like protein, putative similar to thaumatin-like protein [Arabidopsis thaliana] GI:2435406; contains Pfam profile PF00314: Thaumatin family Length = 420 Score = 27.9 bits (59), Expect = 7.2 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 10/78 (12%) Frame = +1 Query: 157 WGKPLGLPSPIMP-PNQHDSKSTPKKQN------PSSTI---LNKNKLNQEKSKEAKRAS 306 +G+P+ P+P P PN+ P+ QN P T+ N +N +++R + Sbjct: 332 YGQPMAPPTPPPPGPNEDSMTPPPQNQNGDGQFMPPPTLDQDPNDQYMNPPIQDQSQRET 391 Query: 307 ESPSKKKTPAPVYMELTY 360 +S S P PV + L + Sbjct: 392 QSSSDLLRPYPVLLLLGF 409 >At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) identical to cDNA CIP4.1 mRNA for COP1-interacting protein 4.1, GI:13160649 Length = 976 Score = 27.9 bits (59), Expect = 7.2 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +1 Query: 160 GKPLGLPSPIMPPNQHDSKSTPKKQNPSSTILNKNKLN-QEKSKEAKRASESPSKKKT 330 G + L M ++ K KK + S T+ NK+K+N K K K+ S S + K+ Sbjct: 870 GSKVDLSDAPMKGTVNNKKEAVKKSSKSVTV-NKSKMNVNNKEKAVKKISNSVTANKS 926 >At3g28790.1 68416.m03593 expressed protein Length = 608 Score = 27.9 bits (59), Expect = 7.2 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +1 Query: 178 PSPIMPPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKT 330 P+P P + STP P+ + K +++ S+ A ES SK ++ Sbjct: 291 PTPSTPTPSTPTPSTPTPSTPAPSTPAAGKTSEKGSESASMKKESNSKSES 341 >At3g28770.1 68416.m03591 expressed protein Length = 2081 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 202 QHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKK 327 + ++ + KK++ NK+ +E KE K+ ES S+KK Sbjct: 1072 ESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKK 1113 >At5g41320.1 68418.m05022 expressed protein Length = 515 Score = 27.5 bits (58), Expect = 9.6 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +1 Query: 193 PPNQHDSKSTPKKQNPSSTILNKNKLNQEKSKEAKRASESPSKKKT-PAPVYMELTYVPH 369 PPN+ + K+ + K K +EK K+ + S+K++ P +E+ Y+P Sbjct: 146 PPNKRGVAAVAAKRPVKKRMTKKKKEEEEKMKKKEEEETKESEKQSKPGESGLEM-YIPE 204 Query: 370 HGNS 381 +S Sbjct: 205 EKSS 208 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.316 0.132 0.391 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,135,751 Number of Sequences: 28952 Number of extensions: 316310 Number of successful extensions: 1302 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1239 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1301 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1584903024 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits)
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