Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0047
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical pr... 213 1e-55
Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical p... 204 6e-53
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 204 6e-53
Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical pr... 87 2e-17
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 31 0.60
U97009-10|AAC69033.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 5.6
Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein. 27 9.8
>Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical
protein K11H3.1a protein.
Length = 371
Score = 213 bits (520), Expect = 1e-55
Identities = 106/202 (52%), Positives = 136/202 (67%), Gaps = 2/202 (0%)
Frame = +1
Query: 94 GSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHENVKYLPGHKLPSNV 270
GSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN+KYLPG LP+NV
Sbjct: 35 GSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHENIKYLPGKVLPNNV 94
Query: 271 VAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAEGGGIDLI 450
VAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIKG + GG+ LI
Sbjct: 95 VAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGVSTEKRGGLKLI 154
Query: 451 SHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQTDYFRXXXX 627
S I LKI +VLMGAN+A EVA + FCE TIGC R PL++ + TD FR
Sbjct: 155 SEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRINVV 214
Query: 628 XXXXXXXICGALKNIVAVGAGF 693
+CGALKN+VA AGF
Sbjct: 215 EDAHTVELCGALKNVVACAAGF 236
>Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical
protein K11H3.1d protein.
Length = 360
Score = 204 bits (497), Expect = 6e-53
Identities = 108/211 (51%), Positives = 138/211 (65%), Gaps = 11/211 (5%)
Frame = +1
Query: 94 GSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHENVKYLPGHKLPSNV 270
GSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN+KYLPG LP+NV
Sbjct: 15 GSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHENIKYLPGKVLPNNV 74
Query: 271 VAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKG--FD-------I 423
VAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIKG FD
Sbjct: 75 VAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGISFDKTNQGVST 134
Query: 424 AEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQ 600
+ GG+ LIS I LKI +VLMGAN+A EVA + FCE TIGC R PL++ +
Sbjct: 135 EKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFH 194
Query: 601 TDYFRXXXXXXXXXXXICGALKNIVAVGAGF 693
TD FR +CGALKN+VA AGF
Sbjct: 195 TDNFRINVVEDAHTVELCGALKNVVACAAGF 225
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 204 bits (497), Expect = 6e-53
Identities = 108/211 (51%), Positives = 138/211 (65%), Gaps = 11/211 (5%)
Frame = +1
Query: 94 GSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHENVKYLPGHKLPSNV 270
GSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN+KYLPG LP+NV
Sbjct: 47 GSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHENIKYLPGKVLPNNV 106
Query: 271 VAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKG--FD-------I 423
VAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIKG FD
Sbjct: 107 VAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGISFDKTNQGVST 166
Query: 424 AEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQ 600
+ GG+ LIS I LKI +VLMGAN+A EVA + FCE TIGC R PL++ +
Sbjct: 167 EKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFH 226
Query: 601 TDYFRXXXXXXXXXXXICGALKNIVAVGAGF 693
TD FR +CGALKN+VA AGF
Sbjct: 227 TDNFRINVVEDAHTVELCGALKNVVACAAGF 257
>Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical
protein F47G4.3 protein.
Length = 374
Score = 165 bits (402), Expect = 2e-41
Identities = 92/207 (44%), Positives = 121/207 (58%), Gaps = 7/207 (3%)
Frame = +1
Query: 94 GSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGK---KLTEIINETHENVKYLPGHKLP 261
GSAIA +VG+ + F+ V++W + G + E IN THEN KYLPG ++P
Sbjct: 33 GSAIACVVGKTVKAQDEVFQPIVSIWCRDSRKPGDLSPSIAETINSTHENPKYLPGRRIP 92
Query: 262 SNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIA-EGGG 438
NVVA ++EA + A +LI VVPHQ + IC L GK++ A A+SL KG + E G
Sbjct: 93 DNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISLTKGISSSCENGE 152
Query: 439 I--DLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYF 612
I LIS I R L + C+VLMGAN+A EVA+ KFCE TIGC+ + ++ + T F
Sbjct: 153 IKMQLISEDIERALGVQCSVLMGANLAGEVADGKFCEATIGCKSLKNGEELKKVFDTPNF 212
Query: 613 RXXXXXXXXXXXICGALKNIVAVGAGF 693
R +CGALKNIVA AGF
Sbjct: 213 RIRVTTDYEAVELCGALKNIVACAAGF 239
>Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical
protein K11H3.1c protein.
Length = 304
Score = 86.6 bits (205), Expect = 2e-17
Identities = 45/95 (47%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 412 GFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMR 588
G + GG+ LIS I LKI +VLMGAN+A EVA + FCE TIGC R PL++
Sbjct: 75 GVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLK 134
Query: 589 DIIQTDYFRXXXXXXXXXXXICGALKNIVAVGAGF 693
+ TD FR +CGALKN+VA AGF
Sbjct: 135 KLFHTDNFRINVVEDAHTVELCGALKNVVACAAGF 169
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +1
Query: 94 GSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHENVKYLPGHKLPSNV 270
GSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN+KYLPG LP+NV
Sbjct: 15 GSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHENIKYLPGKVLPNNV 74
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 66 YTYLQYFLQGFCYCENCWSKCCES 137
YT L + G C+CE+CW ES
Sbjct: 137 YTELPHLTCGHCFCEHCWKSHVES 160
>U97009-10|AAC69033.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein11 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.6
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Frame = +1
Query: 67 IPIYNIFYRGSAIAKIVGRNAASLSNFEDRVTMWVYEEIIEGKKLTEII-NETHENVKYL 243
I I+N + G + K V + A +++ VT++ + K L I+ N+ E + Y
Sbjct: 21 ILIFNPIF-GFSHVKFVSKLADIIADHGQEVTLFQPFHLAL-KNLDGIVKNKNIEIINYY 78
Query: 244 PGHK---LPSNVVAVPDVVEAA--KDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLI 408
P H L PD ++ + L+ F++P T + IK L
Sbjct: 79 PDHYDDLLKLETQTFPDFWDSQLMNNPVLMAFMLPRILGGEFKKTTIQLIKDKEILKKLK 138
Query: 409 -KGFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETT 549
K FD+A +L ++ L +PC ++ A + ++ E F +++
Sbjct: 139 DKKFDVAISETFELTGMYMSHFLGVPCIPILSA-VRLDIFNEAFGQSS 185
>Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical
protein ZK512.6 protein.
Length = 576
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 412 GFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETT 549
G IA+ G + I H++ + C VLMG +A + K TT
Sbjct: 337 GMKIADSGLLAAIPHLV-----MGCVVLMGGQLADYLRSNKILSTT 377
>AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein.
Length = 563
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 412 GFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETT 549
G IA+ G + I H++ + C VLMG +A + K TT
Sbjct: 324 GMKIADSGLLAAIPHLV-----MGCVVLMGGQLADYLRSNKILSTT 364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,308,411
Number of Sequences: 27780
Number of extensions: 303067
Number of successful extensions: 1008
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -