Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0047
(698 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 307 8e-86
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 3.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.4
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 6.4
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.5
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 8.5
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 307 bits (753), Expect = 8e-86
Identities = 142/201 (70%), Positives = 167/201 (83%)
Frame = +1
Query: 94 GSAIAKIVGRNAASLSNFEDRVTMWVYEEIIEGKKLTEIINETHENVKYLPGHKLPSNVV 273
GS IAKI+G NAA+ SNFEDRVTM+VYEEII GKKLTEIINETHENVKYLPGHKLP N++
Sbjct: 16 GSTIAKIIGINAANFSNFEDRVTMYVYEEIINGKKLTEIINETHENVKYLPGHKLPPNII 75
Query: 274 AVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAEGGGIDLIS 453
A+PDVVEAAKDAD+L FVVPHQF++ ICS L GKIKPTA LSLIKGFD +GGGI+LIS
Sbjct: 76 AIPDVVEAAKDADILTFVVPHQFIKRICSALFGKIKPTAIGLSLIKGFDKKQGGGIELIS 135
Query: 454 HIITRCLKIPCAVLMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRXXXXXX 633
HII++ L IP +VLMGAN+ASEVA E FCETTIGC+D +AP+++D+++T YF+
Sbjct: 136 HIISKQLHIPVSVLMGANLASEVANEMFCETTIGCKDKNMAPILKDLMETSYFKVVVVED 195
Query: 634 XXXXXICGALKNIVAVGAGFV 696
CGALKNIVA GAGF+
Sbjct: 196 VDSVECCGALKNIVACGAGFI 216
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 549 HWLSGRNAGSVNAGY 593
HW SG N G+ GY
Sbjct: 1423 HWKSGHNGGASLTGY 1437
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 549 HWLSGRNAGSVNAGY 593
HW SG N G+ GY
Sbjct: 1419 HWKSGHNGGASLTGY 1433
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 197 FFPSIISSYTHIVTLSSKFDRL 132
FF + SY HI T S++F R+
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRI 120
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 197 FFPSIISSYTHIVTLSSKFDRL 132
FF + SY HI T S++F R+
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRI 120
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 197 FFPSIISSYTHIVTLSSKFDRL 132
FF + SY HI T S++F R+
Sbjct: 38 FFVNEKQSYFHIATTSNEFIRI 59
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 553 QWSFRRIFPQQPPMQYWLPLI 491
QW+ R+ P +++W+PL+
Sbjct: 486 QWTCRQPEPLIELIEHWMPLL 506
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 111 FRNSRTPVKNIVNRYIMTK 55
+ + RTP+KN+ I TK
Sbjct: 26 YLSPRTPIKNVYKNNIETK 44
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.5
Identities = 5/12 (41%), Positives = 6/12 (50%)
Frame = +2
Query: 602 QTTSGSWWWTMR 637
Q WWW M+
Sbjct: 360 QNEMNKWWWNMK 371
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 22 ARGKNFPLWSLLGHYIPI 75
ARGK P W G ++ +
Sbjct: 311 ARGKKNPRWEFRGKFVGV 328
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,843
Number of Sequences: 438
Number of extensions: 3862
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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