Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0046
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.45 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +1

Query: 118  IYIVSKSGGLIYNYDHNIPRVETE---KTFGFPLDIKLQYENKKVVVAFGQRDGI 273
            + +  + GG++  +  N+P+ ETE   K+  F     L +   K++ +F +  G+
Sbjct: 1270 VVVNQQIGGIVTYFSTNLPKRETEVRKKSLDFGKLCSLHHHLSKLIKSFNEIYGV 1324


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 337 CLPLFFLSLEIHLLIVIHVQHLFHLFGQMPQQLFYF 230
           CL ++ LSL   L   I+  H +    Q+  ++F F
Sbjct: 265 CLTMYKLSLTEDLYFAIYEMHWYDASKQIQNEVFIF 300


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 496 SGIESLTADTFKLSCFQTLTGVKFIIVTDTNMQGTDV---VLKRIYEL 630
           SG+ S  AD+FK S       +KFI  + T+  G      VLK IY L
Sbjct: 25  SGVNS--ADSFKASKVGPAPPIKFINKSSTDKFGNGAIYEVLKPIYAL 70


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 57  NVKCNCESTKLACSPG 10
           NV  NC+     CSPG
Sbjct: 138 NVTPNCDVKSSVCSPG 153


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 57  NVKCNCESTKLACSPG 10
           NV  NC+     CSPG
Sbjct: 138 NVTPNCDVKSSVCSPG 153


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 346 HLYCLPLFFLSLEIHLLIVIHVQHLFHLF 260
           + YC    F+   +HLL ++ + H F  F
Sbjct: 148 YFYCA---FIIFTVHLLFLLCIYHFFCAF 173



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 603 ISTLHISVCYYYKFY 559
           I T+H  +C YY +Y
Sbjct: 91  IFTVHFLLCTYYFYY 105


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 57  NVKCNCESTKLACSPG 10
           NV  NC+     CSPG
Sbjct: 138 NVTPNCDVKSSVCSPG 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,673
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)