Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0042
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1114|AAN12095.1|  127|Drosophila melanogaster CG32398-P...    29   3.9  
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    29   6.9  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    29   6.9  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    29   6.9  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    29   6.9  

>AE014296-1114|AAN12095.1|  127|Drosophila melanogaster CG32398-PA
           protein.
          Length = 127

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 359 FFYCLGGWTSPQPTWRQVVTGAHRH 285
           FF CL  W +   TWRQ  + +HR+
Sbjct: 76  FFVCLYIWAASSSTWRQQQSESHRN 100


>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 338 WTSPQPTWRQVVT-GAHRHLQRKCATHLEI*VPRSQYSYNGYPTL 207
           W  P    R ++   AH HLQ KC    E+ +   + ++NG P+L
Sbjct: 35  WMYPSVAQRLLILIFAHEHLQWKCVAEFELCL--EEIAFNGTPSL 77


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 338 WTSPQPTWRQVVT-GAHRHLQRKCATHLEI*VPRSQYSYNGYPTL 207
           W  P    R ++   AH HLQ KC    E+ +   + ++NG P+L
Sbjct: 35  WMYPSVAQRLLILIFAHEHLQWKCVAEFELCL--EEIAFNGTPSL 77


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 338 WTSPQPTWRQVVT-GAHRHLQRKCATHLEI*VPRSQYSYNGYPTL 207
           W  P    R ++   AH HLQ KC    E+ +   + ++NG P+L
Sbjct: 257 WMYPSVAQRLLILIFAHEHLQWKCVAEFELCL--EEIAFNGTPSL 299


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 338 WTSPQPTWR-QVVTGAHRHLQRKCATHLEI*VPRSQYSYNGYPTL 207
           W  P    R  ++  AH HLQ KC    E+ +   + ++NG P+L
Sbjct: 219 WMYPSVAQRFLILIFAHEHLQWKCVAEFELCL--EEIAFNGTPSL 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,940,455
Number of Sequences: 53049
Number of extensions: 557285
Number of successful extensions: 1198
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)