Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0041
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KAP4 Cluster: Sec24-related protein, putative; n=2; P...    35   1.7  
UniRef50_Q0ARE0 Cluster: Putative uncharacterized protein precur...    35   2.3  
UniRef50_UPI0000DD7FD8 Cluster: PREDICTED: hypothetical protein;...    34   4.0  
UniRef50_UPI000155C905 Cluster: PREDICTED: similar to UNC5-like ...    33   6.9  
UniRef50_Q2QQG8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_A5KAP4 Cluster: Sec24-related protein, putative; n=2;
           Plasmodium|Rep: Sec24-related protein, putative -
           Plasmodium vivax
          Length = 1554

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = -1

Query: 541 SEPSEPCLQIWEPWKVLRVAAAEAPERGGSDCAQLSCSRDEENSA----HLGGVLQRGSQ 374
           S+P+E  +Q    W+  + ++A +P   G++   LSCS D++  A      G  + RGS 
Sbjct: 225 SQPNEGNVQKTSTWQGKQGSSATSPPANGNNAVTLSCSNDQQRGASSATESGYAIHRGSN 284

Query: 373 WLRCLWRD*IVHRAAEP 323
                  + + H A  P
Sbjct: 285 LASYTRNENVSHGANNP 301


>UniRef50_Q0ARE0 Cluster: Putative uncharacterized protein
           precursor; n=1; Maricaulis maris MCS10|Rep: Putative
           uncharacterized protein precursor - Maricaulis maris
           (strain MCS10)
          Length = 500

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 23/59 (38%), Positives = 24/59 (40%)
 Frame = -1

Query: 484 AAAEAPERGGSDCAQLSCSRDEENSAHLGGVLQRGSQWLRCLWRD*IVHRAAEPPVVPT 308
           A AEA  RGG D  + S   D    A  GG  QRG        RD    R A P   PT
Sbjct: 26  APAEAQRRGGGDEVRRSDGNDSGRGARRGGNPQRGEARTERTRRDAATRRDAPPVTRPT 84


>UniRef50_UPI0000DD7FD8 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 291

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 342 TI*SRQRQRSHCEPRCRTPPRCAEFSSSREQLSWAQSDPP 461
           T+ +R   R  C P  R PPR AEF  S  + + A +D P
Sbjct: 24  TLGTRSSGRGACAPPARVPPRPAEFGESLARFALAAADVP 63


>UniRef50_UPI000155C905 Cluster: PREDICTED: similar to UNC5-like
           protein 3; n=2; Mammalia|Rep: PREDICTED: similar to
           UNC5-like protein 3 - Ornithorhynchus anatinus
          Length = 852

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -1

Query: 523 CL-QIWEP-WKVLRVAAAEAPERGGSDC-AQLSCSRDEENSAHLGGVLQRGSQWLRC 362
           CL + W   W   +V +   P  GGS C AQ  CS    +S  +G   + GS W +C
Sbjct: 242 CLAKCWRACWDKTKVTSPPRPLSGGSWCSAQSRCSVTITDSCPVGNRWEAGSSWSKC 298


>UniRef50_Q2QQG8 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 116

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 371 ATLPLAGLDCPPGCGTPGCANT 306
           AT+PL    CPP CGTP   +T
Sbjct: 8   ATVPLLASACPPACGTPALGST 29


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,890,718
Number of Sequences: 1657284
Number of extensions: 13874449
Number of successful extensions: 31580
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31564
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)