Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0041
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 5.0
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 6.6
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 8.7
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.7
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 183 NNALL*PGTSLIPA 142
N ALL PG ++IPA
Sbjct: 301 NKALLTPGVTMIPA 314
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 6.6
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3
Query: 317 CANTGFKAEFIMNAYASTKRALAVLVTIAHEIDGNDY 207
CA K+ + T A + TIA +IDG Y
Sbjct: 39 CALNELKSGAVYKVVDQTGPTHAPIFTIAVQIDGQTY 75
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 222 RRQRLPANDLAT 187
+RQ +PANDL T
Sbjct: 401 KRQSVPANDLLT 412
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 306 RFQSRIHNERVCVHKASTSCFGDNSP*NRRQRLPAND 196
R ++HNE+ + + TSC + R Q+L N+
Sbjct: 239 RRYEKLHNEKEKLLEERTSCKRYSRSREREQKLYKNE 275
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 8.7
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -3
Query: 335 GCGTPGCANTGFKAEFIMNAYASTKRALAVLVTIAHEIDGNDYP 204
G T +T + I N + + + + T A DG DYP
Sbjct: 1417 GFSTEDILDTADEDLLINNVFYEDETSCMLDKTRAQTFDGKDYP 1460
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,702
Number of Sequences: 438
Number of extensions: 3813
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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