Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0037
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 99 3e-21
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 99 3e-21
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 99 3e-21
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 99 3e-21
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 99 3e-21
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 99 3e-21
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 93 1e-19
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 93 1e-19
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 90 1e-18
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 90 1e-18
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 85 3e-17
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 85 3e-17
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 79 4e-15
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 79 4e-15
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 55 4e-08
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 55 4e-08
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z50177-2|CAA90544.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal pro... 28 5.1
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 6.8
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical pr... 27 8.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 8.9
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 358
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 359 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
+ IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 358
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 359 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
+ IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 358
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 359 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
+ IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 358
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 359 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
+ IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 358
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 359 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
+ IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 358
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 359 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
+ IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 93.5 bits (222), Expect = 1e-19
Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAI-GFPDDDAIRTEFASKSRDLR- 355
+ N +S V S S+ L+ + +A+ GET +E+ KA+ D+ + F++ S L
Sbjct: 27 QQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLV 86
Query: 356 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+ KG E+ +AN ++ + + + + ++N+ ++F +A++IN++V ENT
Sbjct: 87 AEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENT 146
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
IK ++NPDS+S AVL NA YFK W +KF + T
Sbjct: 147 KGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKEST 186
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 93.5 bits (222), Expect = 1e-19
Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Frame = +2
Query: 182 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAI-GFPDDDAIRTEFASKSRDLR- 355
+ N +S V S S+ L+ + +A+ GET +E+ KA+ D+ + F++ S L
Sbjct: 27 QQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLV 86
Query: 356 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 535
+ KG E+ +AN ++ + + + + ++N+ ++F +A++IN++V ENT
Sbjct: 87 AEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENT 146
Query: 536 NNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 655
IK ++NPDS+S AVL NA YFK W +KF + T
Sbjct: 147 KGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKEST 186
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 90.2 bits (214), Expect = 1e-18
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Frame = +2
Query: 200 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 376
SVVLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 377 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 556
K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +IKDL
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 557 VNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 658
+ DS ++A A LVNA+YFK W SKF + T+
Sbjct: 141 IPADSANNA-FAFLVNAMYFKADWQSKFAKESTT 173
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 90.2 bits (214), Expect = 1e-18
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Frame = +2
Query: 200 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 376
SVVLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 377 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 556
K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +IKDL
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 557 VNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 658
+ DS ++A A LVNA+YFK W SKF + T+
Sbjct: 141 IPADSANNA-FAFLVNAMYFKADWQSKFAKESTT 173
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Frame = +2
Query: 206 VLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRT-EFASKSRDLRSIKGVEL 376
V S S+L LA + L + G T ++ ++ G D+ I F +K + S+ VE
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLN-SSVNDVET 90
Query: 377 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 556
+AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T +I D+
Sbjct: 91 LIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDM 150
Query: 557 VNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 661
+ PD+L A+L+NAI+F+G W KF E S+
Sbjct: 151 IKPDNLKDVD-AILINAIFFQGDWRRKFGEPAESN 184
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Frame = +2
Query: 206 VLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRT-EFASKSRDLRSIKGVEL 376
V S S+L LA + L + G T ++ ++ G D+ I F +K + S+ VE
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLN-SSVNDVET 90
Query: 377 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 556
+AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T +I D+
Sbjct: 91 LIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDM 150
Query: 557 VNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 661
+ PD+L A+L+NAI+F+G W KF E S+
Sbjct: 151 IKPDNLKDVD-AILINAIFFQGDWRRKFGEPAESN 184
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Frame = +2
Query: 197 KSVVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 367
+S+V S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 368 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRI 547
VE+ +ANKVY+ G ++ F + + +D +++D + A + IN +V TN +I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 548 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 661
K++ DS+ A A+L+N+IYFK W KFD S+
Sbjct: 140 KNIATQDSIKDA-IALLINSIYFKADWDDKFDGMSVSE 176
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Frame = +2
Query: 197 KSVVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 367
+S+V S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 368 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRI 547
VE+ +ANKVY+ G ++ F + + +D +++D + A + IN +V TN +I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 548 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 661
K++ DS+ A A+L+N+IYFK W KFD S+
Sbjct: 140 KNIATQDSIKDA-IALLINSIYFKADWDDKFDGMSVSE 176
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 55.2 bits (127), Expect = 4e-08
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 197 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD--DDAIRTEFASKSRDLRSIK-G 367
+S V S ++ L L A+ GET ++ + F + D + T F++ S L ++K
Sbjct: 24 QSFVFSPIAISLALYSLYEAARGETRSQIHDCL-FKNATDGEMVTHFSNVSTALSAMKKD 82
Query: 368 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRI 547
++K+ N + +G K + + ++N +V + D K+IN + ENT+ I
Sbjct: 83 PQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIRENTDGHI 142
Query: 548 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 658
K + S+ V ++A F+ W +KF + TS
Sbjct: 143 KKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTS 179
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 55.2 bits (127), Expect = 4e-08
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Frame = +2
Query: 197 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD--DDAIRTEFASKSRDLRSIK-G 367
+S V S ++ L L A+ GET ++ + F + D + T F++ S L ++K
Sbjct: 23 QSFVFSPIAISLALYSLYEAARGETRSQIHDCL-FKNATDGEMVTHFSNVSTALSAMKKD 81
Query: 368 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRI 547
++K+ N + +G K + + ++N +V + D K+IN + ENT+ I
Sbjct: 82 PQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIRENTDGHI 141
Query: 548 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 658
K + S+ V ++A F+ W +KF + TS
Sbjct: 142 KKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTS 178
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Frame = +2
Query: 5 SPGLQEFGTRIRDTQATNMKTII---CLFTIAIAAMAAVTNL------SNVLKN-GNDNF 154
SP L + +R Q ++T+ C A+ A+T+L N+L+N G D+
Sbjct: 88 SPSLDDSDWFLRRNQFPELQTLHFKNCSLKTFPKALMALTSLLELDLSDNMLENLGADSI 147
Query: 155 TARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALASDGET 271
R V+ +NN KS+ + F +P L L L+ + T
Sbjct: 148 HIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSGNNMT 187
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 284 KALHGFHHQKLKLTEREEAAPKMPRGQRFSL 192
K L H ++ T EE+ P P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193
>Z50177-2|CAA90544.1| 336|Caenorhabditis elegans Hypothetical
protein F46G10.4 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = +2
Query: 401 HDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 580
+ GG+L F V D + ID S NTV+ +N + + N +D+V P +
Sbjct: 106 NSGGQLLSEFGVGLEDY--AAYTEIDGSNNTVSVGHVNVYFLDAMNQMWEDMVQPSIKNR 163
Query: 581 ATAAVLVNAIYFKGAWSS 634
L+ GA ++
Sbjct: 164 QNYTFLITGHSLGGAMAT 181
>AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 19 protein.
Length = 198
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 1 WIPRAAGIRHEDSRYAGHKHEDNHLF--VYYRHRGNGSRHK 117
WI R +R+ RY K D HL+ +Y R +GN ++K
Sbjct: 95 WIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNK 135
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 177 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 52
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 413 KLDE-NFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNP-DSLSSAT 586
KLD+ VVS+ + D+ DFS N K ++ ENT N + N D L
Sbjct: 724 KLDQPKLVVVSQGICEKDMLTDDFSSNRNFQKPNIEFKRENTFNCSMECDNSYDPLCGTN 783
Query: 587 AAVLVNA 607
NA
Sbjct: 784 GVTFTNA 790
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -1
Query: 175 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 56
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 170 TEVVKNNPGKSVVLSAFSVLPPLAQLAL 253
T ++KN P KS V +F++ P QLA+
Sbjct: 674 TTIIKNVPSKSDVFVSFTIPPAGTQLAM 701
>Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical
protein T01B7.5a protein.
Length = 407
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/49 (24%), Positives = 31/49 (63%)
Frame = +2
Query: 413 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLV 559
++D++ A ++ D+F+ D ++ + + TV +++ ++ EEN + K +V
Sbjct: 124 QIDKSTAAIA-DLFDDDDEDEEEKEETVEVETVLEFNEENARTKNKKIV 171
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -1
Query: 175 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 56
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,414
Number of Sequences: 27780
Number of extensions: 300012
Number of successful extensions: 936
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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