Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0034
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde dehy... 132 2e-31
AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde dehy... 132 2e-31
AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde dehy... 132 2e-31
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 122 2e-28
U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde dehydr... 66 2e-11
U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde dehydr... 66 2e-11
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 57 1e-08
U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde dehydr... 55 4e-08
U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde dehydr... 55 4e-08
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 49 4e-06
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 44 1e-04
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 41 0.001
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 41 0.001
U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde dehydr... 36 0.037
AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde dehy... 35 0.048
AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde dehy... 32 0.34
Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 31 0.60
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 31 0.79
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 29 2.4
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 29 2.4
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 7.3
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 27 9.7
>AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform c protein.
Length = 494
Score = 132 bits (320), Expect = 2e-31
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFS-NQYNIQKL 180
PT+L V +D M DEIFGP+LPI+ +++ E++++I + E PL Y+F+ N+ +++L
Sbjct: 319 PTVL-DVEKSDPFMHDEIFGPVLPIITVQSFSESLEYIADGEKPLAAYIFTRNEAKVKRL 377
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFAAI 360
E T SG +++ND +M V+TLPFGGVG SG+G Y GK DTFTH+KS L + F
Sbjct: 378 LNE-TSSGGVTVNDVLMHITVDTLPFGGVGVSGMGRYRGKYGFDTFTHEKSVLHRGF--F 434
Query: 361 GEKLASGRYPPYTEGNLKFITALMKKR 441
GE L + RYPP ++ L + L KR
Sbjct: 435 GESLLAARYPPLSQQKLDQMRRLTGKR 461
>AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform b protein.
Length = 493
Score = 132 bits (320), Expect = 2e-31
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFS-NQYNIQKL 180
PT+L V +D M DEIFGP+LPI+ +++ E++++I + E PL Y+F+ N+ +++L
Sbjct: 319 PTVL-DVEKSDPFMHDEIFGPVLPIITVQSFSESLEYIADGEKPLAAYIFTRNEAKVKRL 377
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFAAI 360
E T SG +++ND +M V+TLPFGGVG SG+G Y GK DTFTH+KS L + F
Sbjct: 378 LNE-TSSGGVTVNDVLMHITVDTLPFGGVGVSGMGRYRGKYGFDTFTHEKSVLHRGF--F 434
Query: 361 GEKLASGRYPPYTEGNLKFITALMKKR 441
GE L + RYPP ++ L + L KR
Sbjct: 435 GESLLAARYPPLSQQKLDQMRRLTGKR 461
>AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform a protein.
Length = 493
Score = 132 bits (320), Expect = 2e-31
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFS-NQYNIQKL 180
PT+L V +D M DEIFGP+LPI+ +++ E++++I + E PL Y+F+ N+ +++L
Sbjct: 319 PTVL-DVEKSDPFMHDEIFGPVLPIITVQSFSESLEYIADGEKPLAAYIFTRNEAKVKRL 377
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFAAI 360
E T SG +++ND +M V+TLPFGGVG SG+G Y GK DTFTH+KS L + F
Sbjct: 378 LNE-TSSGGVTVNDVLMHITVDTLPFGGVGVSGMGRYRGKYGFDTFTHEKSVLHRGF--F 434
Query: 361 GEKLASGRYPPYTEGNLKFITALMKKR 441
GE L + RYPP ++ L + L KR
Sbjct: 435 GESLLAARYPPLSQQKLDQMRRLTGKR 461
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 122 bits (295), Expect = 2e-28
Identities = 59/117 (50%), Positives = 77/117 (65%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PT+L V D M DEIFGP+LPI+ ++N E+I FIN+ E PL Y+F+ + F
Sbjct: 322 PTVL-DVEKTDPFMHDEIFGPVLPIITVKNLCESIDFINKGEKPLAAYIFTKDEAKVQRF 380
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFA 354
+T SG +++ND IM V TLPFGGVG SG+G Y GK DTFTH+KS L++ FA
Sbjct: 381 LNETTSGGVTVNDVIMHVAVITLPFGGVGVSGMGRYRGKFGFDTFTHEKSVLQRVFA 437
>U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform b protein.
Length = 503
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
P IL +TP V +EIFG +L I+ + EAIK N+ + L + + +
Sbjct: 384 PCILTGITPKMTVYREEIFGSVLLIIPFDTEDEAIKIANDTDMGLAAGLVTKDLSRSYRV 443
Query: 184 TEQTRSGSISINDTIMFYGVETL-PFGGVGNSGIGAYHGKKTIDTFTHKKS 333
+EQ +G++ +N + V L PFGGVG SG G +G ++ +TH KS
Sbjct: 444 SEQLNAGNVYVN---TYNDVSPLVPFGGVGESGFGRENGTAVLEHYTHLKS 491
>U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform a protein.
Length = 687
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
P IL +TP V +EIFG +L I+ + EAIK N+ + L + + +
Sbjct: 568 PCILTGITPKMTVYREEIFGSVLLIIPFDTEDEAIKIANDTDMGLAAGLVTKDLSRSYRV 627
Query: 184 TEQTRSGSISINDTIMFYGVETL-PFGGVGNSGIGAYHGKKTIDTFTHKKS 333
+EQ +G++ +N + V L PFGGVG SG G +G ++ +TH KS
Sbjct: 628 SEQLNAGNVYVN---TYNDVSPLVPFGGVGESGFGRENGTAVLEHYTHLKS 675
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/111 (30%), Positives = 55/111 (49%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
+PTI A V K+ ++EIFGP++ ++ ++ E I+ N + L V +N N
Sbjct: 419 KPTIFANVNDQMKIAQEEIFGPVMIVIRFDSMEELIEKANNTIYGLAAGVVTNDLNKALQ 478
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
R+GS+ +N +F PFGG SGIG G+ + +T K+
Sbjct: 479 VANTIRAGSVWVNCYDVF--DPAAPFGGFKQSGIGRELGEYGLAAYTEVKT 527
>U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform b protein.
Length = 422
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/111 (28%), Positives = 54/111 (48%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
+PTI A V + ++EIFGP++ I+ + E ++ N + L V + +
Sbjct: 304 KPTIFANVKDQMTIAQEEIFGPVMTIIRFDTMEELVEKANNTIYGLAAGVMTKDIDKALH 363
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
TR+GS+ +N +F PFGG SGIG G+ ++ +T K+
Sbjct: 364 IANATRAGSVWVNCYDVFDA--AAPFGGFKQSGIGRELGEYGLEAYTEVKT 412
>U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform a protein.
Length = 510
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/111 (28%), Positives = 54/111 (48%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
+PTI A V + ++EIFGP++ I+ + E ++ N + L V + +
Sbjct: 392 KPTIFANVKDQMTIAQEEIFGPVMTIIRFDTMEELVEKANNTIYGLAAGVMTKDIDKALH 451
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
TR+GS+ +N +F PFGG SGIG G+ ++ +T K+
Sbjct: 452 IANATRAGSVWVNCYDVFDA--AAPFGGFKQSGIGRELGEYGLEAYTEVKT 500
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/108 (28%), Positives = 48/108 (44%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
EPT++ V + EIFGPI + + E ++ N L YVF + +
Sbjct: 380 EPTLITNVQSNTNIAHTEIFGPIASVQKFRDEQEVLEAANNCRVGLAGYVFGRDQSRLQR 439
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTH 324
+ G + +N+ ++ FGGV SGIG G + ID FT+
Sbjct: 440 VARKLEVGMVGVNEGLI--SCAEAAFGGVKESGIGREGGAQGIDEFTN 485
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PTILA V P +EIFGP+L ++ EN EAI+ IN + +F++ + F
Sbjct: 391 PTILAGVKPNMTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARKF 450
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIG--AYHGKKTIDTFTHKKS 333
T + G I IN I + F G S +G ++GK I +T K+
Sbjct: 451 TNEVDVGQIGINVPIP-VPLPMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKT 501
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PT++ + A KVM DEIFGP++ I + A E I+ N + L V+S+ +
Sbjct: 390 PTVIVGLHDASKVMTDEIFGPVVCITPFDTAEEVIERANSTPYGLSATVWSSDSDELLNT 449
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIG 285
+ R+G++ N T + + ++PFGG SG G
Sbjct: 450 ANELRAGTVWCN-TWLARDL-SMPFGGCKQSGNG 481
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
EP I+ ++ + + +EIFG ++ I+ E E I N + L VFS
Sbjct: 378 EPAIITGLSDEARAVREEIFGAVMLILPFETEEEVIARANNTTYGLAAGVFSGNLARGHR 437
Query: 181 FTEQTRSGSISINDTIMFYGVE-TLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
+ ++G++ IN + E +PFGG NSG G + T+ T K+
Sbjct: 438 VAARLQAGTVFIN---TYNDTEVNVPFGGFKNSGHGRENCIDTLRAHTQTKA 486
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCI--ENAYEAIKFINEREHPLVLYVFSNQYNIQK 177
PTIL+ + + +E FGPI+ + ++ + ++ N+ E L VF+ +
Sbjct: 794 PTILSNIDDENFAASEESFGPIMCVSSFDDDDIEDVLRRANDTEFGLAAGVFTRDSSKSL 853
Query: 178 LFTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
E +G++ +N T V PFGG SG G G++ ++ + K+
Sbjct: 854 RVAEALHAGTVFVN-TYQKTDV-AAPFGGFKQSGFGKDMGEEALNEYLVTKT 903
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCI--ENAYEAIKFINEREHPLVLYVFSNQYNIQK 177
PTIL+ + + +E FGPI+ + ++ + ++ N+ E L VF+ +
Sbjct: 794 PTILSNIDDENFAASEESFGPIMCVSSFDDDDIEDVLRRANDTEFGLAAGVFTRDSSKSL 853
Query: 178 LFTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
E +G++ +N T V PFGG SG G G++ ++ + K+
Sbjct: 854 RVAEALHAGTVFVN-TYQKTDV-AAPFGGFKQSGFGKDMGEEALNEYLVTKT 903
>U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde
dehydrogenase protein 9 protein.
Length = 531
Score = 35.5 bits (78), Expect = 0.037
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PTI+ + V+ E F PIL ++ EAI NE + L +F+ NIQ +F
Sbjct: 403 PTIVTGLKHDSPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSLFTT--NIQNVF 460
Query: 184 TEQTRSGSIS--INDTIMFYGVET-LPFGGVGNSGIGAYHGKKTIDTFTHKKSC 336
GS +N I G E FGG +G G G + + + +C
Sbjct: 461 KWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWRQYMRRSTC 514
>AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform a protein.
Length = 563
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAY--EAIKFINE-REHPLVLYVFSNQYNI 171
EPT++ P K++ +E+FGP++ ++ E++ E + + + + L VFS
Sbjct: 430 EPTLITVTDPKSKLLTEEMFGPVVTVLVYEDSKVDEVLATVKDATPYGLTGAVFSQDKEF 489
Query: 172 QKLFTEQTRS--GSISINDTIMFYGVETLPFGGVGNSG 279
+ R G++ +ND V PFGG SG
Sbjct: 490 LYRARDVLRDAVGNMYLNDKSTGSIVGQQPFGGSRLSG 527
>AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform b protein.
Length = 512
Score = 32.3 bits (70), Expect = 0.34
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENA 96
EPT++ P K++ +E+FGP++ ++ E++
Sbjct: 430 EPTLITVTDPKSKLLTEEMFGPVVTVLVYEDS 461
>Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical
protein F31B12.3 protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLV-LYVFSNQYNIQKL 180
PT+L +T D +M +E+ LP V + IK + ER+ L V+ ++ ++KL
Sbjct: 261 PTLLRCITNTDGLMSEEMQAQCLP-VDLRGDRRTIKLVKERKRKLFHSQVYESEIGMKKL 319
Query: 181 FTEQTR 198
+ + +
Sbjct: 320 YIQTAK 325
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFS 156
EP I+ ++ + + +EIFG ++ I+ E E I N + L VFS
Sbjct: 378 EPAIITGLSDEARAVREEIFGAVMLILPFETEEEVIARANNTTYGLAAGVFS 429
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 202 GSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
G IS+ TI +G GG+ SG+ A+ G T H S
Sbjct: 455 GGISVGGTIGSHGASAHATGGIIGSGVQAHRGSGTYQQSHHSYS 498
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 202 GSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
G IS+ TI +G GG+ SG+ A+ G T H S
Sbjct: 1081 GGISVGGTIGSHGASAHATGGIIGSGVQAHRGSGTYQQSHHSYS 1124
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
protein F21H12.6 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 375 FRPLPSLHRRKLEIHNGTNEETSRALAKVSATLHGLRSRSCYILRY-LRMAKDGVR*FLK 551
F +P R+ +++ NGT+ + A V+ L GL+ + Y +RMA + L
Sbjct: 481 FAGVPQYCRQSMQMMNGTSMSSPNAAGNVACMLSGLKQNNLKWTPYTVRMALENTAYMLP 540
Query: 552 T*SYDSQG 575
SQG
Sbjct: 541 HIESFSQG 548
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.3
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 97 YEAIKFINEREHPLVLYVFSNQYNIQKLFTEQTRSGSISINDTIMFYGVETLPFGGVGNS 276
YE I+ R HP+ +Y F + T++T + +S+ I+ +L G+S
Sbjct: 348 YEKIEVF--RSHPMEIYFFQ-----ARDITDKTVACVVSLKILILNKTQASLNISLKGDS 400
Query: 277 GIGAY---HGKKTIDTFTHKKSCLKK 345
G GA GKKTI + SC K+
Sbjct: 401 GGGAIADVKGKKTIIGVLSQTSCQKR 426
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 396 HRRKLEIHNGTNEETSRALAKVSATLHGLRSRS 494
HRR+ E H+ EE SRA A + LH + S
Sbjct: 718 HRRREEEHHRRQEEESRARALQQSLLHASQVES 750
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 396 HRRKLEIHNGTNEETSRALAKVSATLHGLRSRS 494
HRR+ E H+ EE SRA A + LH + S
Sbjct: 718 HRRREEEHHRRQEEESRARALQQSLLHASQVES 750
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,702,152
Number of Sequences: 27780
Number of extensions: 332285
Number of successful extensions: 785
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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