Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0034
(696 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 134 7e-32
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 126 1e-29
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 124 7e-29
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 124 7e-29
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 80 2e-15
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 75 5e-14
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 62 3e-10
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 57 1e-08
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 54 9e-08
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 54 9e-08
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 54 1e-07
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 52 3e-07
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 49 3e-06
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 47 1e-05
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 46 3e-05
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 31 0.73
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 31 0.73
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 28 6.8
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 28 6.8
At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containi... 27 9.0
At1g51720.1 68414.m05828 glutamate dehydrogenase, putative simil... 27 9.0
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 134 bits (323), Expect = 7e-32
Identities = 63/143 (44%), Positives = 92/143 (64%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PTIL V A +M++EIFGP+LPI+ ++ + + I + PL Y+F+N ++K F
Sbjct: 394 PTILLDVPEASSMMQEEIFGPLLPIITVQKIEDGFQVIRSKPKPLAAYLFTNNKELEKQF 453
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFAAIG 363
+ +G I+INDT++ V+ LPFGGVG SGIGAYHGK + +TF+HKK L ++F+ G
Sbjct: 454 VQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFS--G 511
Query: 364 EKLASGRYPPYTEGNLKFITALM 432
+ A RYPPYT + AL+
Sbjct: 512 D--ADLRYPPYTPKKKMVLKALL 532
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 126 bits (305), Expect = 1e-29
Identities = 60/148 (40%), Positives = 90/148 (60%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
EPTIL ++M +EIFGPILPI+ + + E+I IN + PL +Y F+N N++
Sbjct: 329 EPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKPKPLAIYAFTNDENLKTR 388
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFAAI 360
+T SGS++ ND ++ Y + LPFGGVG SGIG YHGK + D F+H+K+ ++ ++
Sbjct: 389 ILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSFDCFSHEKAIME---GSL 445
Query: 361 GEKLASGRYPPYTEGNLKFITALMKKRH 444
G L RYPP+ L FI ++ +
Sbjct: 446 GMDL-EARYPPWNNFKLTFIRLAFREAY 472
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 124 bits (298), Expect = 7e-29
Identities = 59/143 (41%), Positives = 88/143 (61%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PTIL V +M +EIFGP+LPI+ + N E+ I R PL Y+F++ +++ F
Sbjct: 331 PTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERF 390
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFAAIG 363
+G I +ND + + TLPFGGVG SG+GAYHGK + D F+HKK+ L ++ G
Sbjct: 391 AATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSL--FG 448
Query: 364 EKLASGRYPPYTEGNLKFITALM 432
+ ++ RYPPY+ G L+ + AL+
Sbjct: 449 D--SAVRYPPYSRGKLRLLKALV 469
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 124 bits (298), Expect = 7e-29
Identities = 59/143 (41%), Positives = 88/143 (61%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PTIL V +M +EIFGP+LPI+ + N E+ I R PL Y+F++ +++ F
Sbjct: 331 PTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERF 390
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNFAAIG 363
+G I +ND + + TLPFGGVG SG+GAYHGK + D F+HKK+ L ++ G
Sbjct: 391 AATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSL--FG 448
Query: 364 EKLASGRYPPYTEGNLKFITALM 432
+ ++ RYPPY+ G L+ + AL+
Sbjct: 449 D--SAVRYPPYSRGKLRLLKALV 469
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PT+L V K+M++E FGPI+PI+ E IK N+ + L VFS + K
Sbjct: 417 PTVLINVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQI 476
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNF-AAI 360
Q + G +IND Y ++LPFGGV +SG G + G + + KS ++ F I
Sbjct: 477 ASQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLI 536
Query: 361 GEKLASGRYPPYTEGNLKFITALMKKRHG 447
K+ P E +F AL++ +G
Sbjct: 537 KTKIPKPIQYPVAENAFEFQEALVETLYG 565
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 74.9 bits (176), Expect = 5e-14
Identities = 41/116 (35%), Positives = 60/116 (51%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
PT+L V K+M++E FGPI+PI+ E IK N+ + L VFS + K
Sbjct: 417 PTVLINVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQI 476
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKSCLKKNF 351
Q + G +IND Y ++LPFGGV +SG G + G + + KS ++ F
Sbjct: 477 ASQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRF 532
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
EPT++ V+ + ++EIFGP+ P++ + +AI+ N+ L Y+F+N
Sbjct: 411 EPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWR 470
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTH-KKSCL 339
E G + +N+ ++ E PFGGV SG+G K +D + K CL
Sbjct: 471 VFEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCL 522
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
+PTI A VT K+ +DEIFGP++ ++ + E IK N ++ L + S ++
Sbjct: 382 QPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINT 441
Query: 181 FTEQTRSGSISINDTIMFYGVE-TLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
+ ++G I +N ++G + P+GG SG G +D + KS
Sbjct: 442 VSRSIKAGIIWVN---CYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKS 490
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 54.0 bits (124), Expect = 9e-08
Identities = 32/110 (29%), Positives = 54/110 (49%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
P +L V P ++ +E FGP++P++ I + E I N L VF+ N L
Sbjct: 375 PLLLDNVRPDMRIAWEEPFGPVVPVLRINSVEEGINHCNASNFGLQGCVFTKDINKAILI 434
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
++ +G++ IN G + PF G+ +SGIG+ +I+ T K+
Sbjct: 435 SDAMETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGVTNSINLMTKVKT 483
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 54.0 bits (124), Expect = 9e-08
Identities = 32/110 (29%), Positives = 54/110 (49%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKLF 183
P +L V P ++ +E FGP++P++ I + E I N L VF+ N L
Sbjct: 375 PLLLDNVRPDMRIAWEEPFGPVVPVLRINSVEEGINHCNASNFGLQGCVFTKDINKAILI 434
Query: 184 TEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
++ +G++ IN G + PF G+ +SGIG+ +I+ T K+
Sbjct: 435 SDAMETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGVTNSINLMTKVKT 483
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
EPTI+ VT + ++ +E+FGP+L + + EAI+ N+ + L V SN
Sbjct: 376 EPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDR 435
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKK 330
+E +G + IN + + P+GGV SG G G+ +D + K
Sbjct: 436 ISEAFEAGIVWINCSQPCF--TQAPWGGVKRSGFGRELGEWGLDNYLSVK 483
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/111 (27%), Positives = 55/111 (49%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
+PT+ + V + +DEIFGP+ I+ + E IK NE ++ L VF+ +
Sbjct: 419 QPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANR 478
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
+ ++G++ +N +F +PFGG SG G G +++ + K+
Sbjct: 479 VSRALKAGTVWVNCFDVFDA--AIPFGGYKMSGNGREKGIYSLNNYLQIKA 527
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 48.8 bits (111), Expect = 3e-06
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Frame = +1
Query: 4 PTILAKVTPADKVMEDEIFGPILPIVCIE-NAY-EAIKFINEREHPLVLYVFSNQYNIQK 177
PTIL+ VTP + ++EIFGP+L VC++ N++ EAI IN+ ++ +F++ +
Sbjct: 475 PTILSGVTPDMECYKEEIFGPVL--VCMQANSFDEAISIINKNKYGNGAAIFTSSGAAAR 532
Query: 178 LFTEQTRSGSISINDTIMFYGVETLP-FGGVGNSGIGA----YHGKKTIDTFTHKKS 333
F +G I IN I LP F GN A ++GK +D FT K+
Sbjct: 533 KFQMDIEAGQIGINVPIPV----PLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKT 585
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/111 (27%), Positives = 51/111 (45%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
+PT+ + V + DEIFGP+ I+ ++ E I N + L VF+ +
Sbjct: 415 QPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDTAHR 474
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKKS 333
R G++ IN + ++PFGG SGIG G +++ + K+
Sbjct: 475 LMRALRVGTVWINCFDVLDA--SIPFGGYKMSGIGREKGIYSLNNYLQVKA 523
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/110 (25%), Positives = 53/110 (48%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFSNQYNIQKL 180
EP I++ VT + ++ +E+FGP L + EAI+ N+ ++ L V SN
Sbjct: 376 EPAIVSNVTTSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDR 435
Query: 181 FTEQTRSGSISINDTIMFYGVETLPFGGVGNSGIGAYHGKKTIDTFTHKK 330
++ ++G + +N + + P+GG SG G G+ ++ + K
Sbjct: 436 VSKAFQAGIVWVNCSQPCFC--QAPWGGTKRSGFGRELGEWGLENYLSVK 483
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 31.1 bits (67), Expect = 0.73
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFS-NQYNIQK 177
EPTI+ +++ V+++E+F P+L ++ ++ EA+ N L +F+ N NI +
Sbjct: 380 EPTII-EISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSVPQGLSSSIFTRNPENIFR 438
Query: 178 LFTEQTRSGSISINDTIMFYGVET-LPFGGVGNSGIGAYHGKKTIDTFTHKKSC 336
I +N I G E FGG +G G G + + + +C
Sbjct: 439 WIGPLGSDCGI-VNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 31.1 bits (67), Expect = 0.73
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +1
Query: 1 EPTILAKVTPADKVMEDEIFGPILPIVCIENAYEAIKFINEREHPLVLYVFS-NQYNIQK 177
EPTI+ +++ V+++E+F P+L ++ ++ EA+ N L +F+ N NI +
Sbjct: 380 EPTII-EISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSVPQGLSSSIFTRNPENIFR 438
Query: 178 LFTEQTRSGSISINDTIMFYGVET-LPFGGVGNSGIGAYHGKKTIDTFTHKKSC 336
I +N I G E FGG +G G G + + + +C
Sbjct: 439 WIGPLGSDCGI-VNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 88 ENAYEAIKFINEREHPLVLYVFSNQYNIQKLFTEQTRSG 204
++A I+ + E H +Y++ Y I++ + E+ +SG
Sbjct: 309 DSAVRVIRGLKEASHNAKIYIYDGLYEIKESWVEKGKSG 347
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 88 ENAYEAIKFINEREHPLVLYVFSNQYNIQKLFTEQTRSG 204
++A I+ + E H +Y++ Y I++ + E+ +SG
Sbjct: 309 DSAVRVIRGLKEASHNAKIYIYDGLYEIKESWVEKGKSG 347
>At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 836
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 366 ETGFRPLPSLHRRKLEIHNGTNEETSRALAKVSATLHGLR-SRSCYI 503
+ GF P PS + LE+H G+ + S S T GLR S YI
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYI 492
>At1g51720.1 68414.m05828 glutamate dehydrogenase, putative similar
to NADP-specific glutatamate dehydrogenase (NADP-GDH)
SP:P28724 [Giardia lamblia (Giardia intestinalis)]
Length = 637
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 300 EDYRYIHTQKELPQEELRCYWRETGF 377
E YRY+ K+LP EE+ RE G+
Sbjct: 338 EMYRYMGPDKDLPSEEVGVGTREMGY 363
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,764,633
Number of Sequences: 28952
Number of extensions: 306523
Number of successful extensions: 730
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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