Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0033
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   1.7  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.9  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/63 (25%), Positives = 23/63 (36%)
 Frame = +3

Query: 120 CQLCGCVCALASRTLICP*KNDFTVDCRSRKXXXXXXXXXXXXCVSTCLYVWIRPSGKRV 299
           C  C      ++RT+ CP +   +    +R             C   C  +W RPS  R 
Sbjct: 20  CWDCTVWSMASNRTVRCP-RTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78

Query: 300 NPA 308
            PA
Sbjct: 79  APA 81


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 370 TLVLRDFISILHKGTGCLLQSQFRFTKKILV 462
           T+V+++  ++L   TGC  Q+  +F   ILV
Sbjct: 843 TMVIKNLDNLLAVPTGCGEQNMVKFVPNILV 873


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,332
Number of Sequences: 2352
Number of extensions: 13561
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)