Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0032
(757 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 186 4e-48
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 180 3e-46
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 175 6e-45
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 164 1e-41
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 163 3e-41
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 158 9e-40
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 101 8e-23
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 88 1e-18
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 87 3e-18
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 84 2e-17
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 83 4e-17
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 79 5e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 79 9e-16
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 79 9e-16
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 78 1e-15
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 77 3e-15
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 71 1e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 2e-11
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 52 7e-08
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.025
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.033
SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr 2... 28 1.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.3
SPBC336.14c |ppk26||serine/threonine protein kinase Ppk26|Schizo... 27 3.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.8
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 6.7
SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces ... 25 8.8
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 25 8.8
SPAC29B12.04 |snz1||pyridoxine biosynthesis protein|Schizosaccha... 25 8.8
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 186 bits (452), Expect = 4e-48
Identities = 91/177 (51%), Positives = 118/177 (66%), Gaps = 10/177 (5%)
Frame = +1
Query: 256 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 435
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG VE+ALWD
Sbjct: 1 MATELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWD 60
Query: 436 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 615
TAGQEDY+RLRPLSY ++ L+C++V S S +NV KW E+ HF +S+PI+LVA K
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKA 120
Query: 616 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVR 756
DLR+ K + VTT+EG+ + +KI A +ECSA + EVFE A R
Sbjct: 121 DLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATR 177
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 180 bits (437), Expect = 3e-46
Identities = 86/177 (48%), Positives = 118/177 (66%), Gaps = 10/177 (5%)
Frame = +1
Query: 256 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 435
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG +E+ALWD
Sbjct: 1 MTTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWD 60
Query: 436 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 615
TAGQEDY+RLRPLSY ++ L+C+SV + S +NV KW E+ HF +++PI+LV K+
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKV 120
Query: 616 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVR 756
DLR+ K + +T +EG+ + +KI A +ECSA ++EVFE A R
Sbjct: 121 DLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 175 bits (426), Expect = 6e-45
Identities = 84/170 (49%), Positives = 113/170 (66%), Gaps = 10/170 (5%)
Frame = +1
Query: 274 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 453
+K VVGDG VGKTCLL YT N+FP +YVPTVFDNY + + E + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 454 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 633
Y+RLRPLSY QT+ FLVC+SV S +S+ENV KW+PE+ H VP ++V T+IDLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDP 123
Query: 634 KA----------VVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAV 753
+T ++G++L +++ A VECSAL + + VF+EA+
Sbjct: 124 SVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAI 173
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 164 bits (398), Expect = 1e-41
Identities = 77/166 (46%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Frame = +1
Query: 277 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 456
KI ++GDG GKT LL V+T+ FP+ Y PT+F+NY+ I VDG +E++LWDTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 457 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 636
++LR LSY+ T+ ++C++V SR S ENV+ KW PE+ V +VLVA K DLR +D+
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134
Query: 637 ------AVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVR 756
++ +EG KKI A +ECSA ++E F EA R
Sbjct: 135 EQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 163 bits (395), Expect = 3e-41
Identities = 83/171 (48%), Positives = 109/171 (63%), Gaps = 12/171 (7%)
Frame = +1
Query: 277 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITV--DGEDVEMALWDTAGQE 450
K+ VVGDG GKTCLL V++ FPE YVPTVF+NY+ IT + + +E+ALWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 451 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 630
+Y+RLRPLSY +N L+C+S+ +S NV KWYPE++HF PIVLV K DLR
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 631 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAV 753
A VT Q+ + + + A + VECSA E ++EVF+ AV
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNAPY-VECSAKENTGVNEVFQLAV 185
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 158 bits (383), Expect = 9e-40
Identities = 81/172 (47%), Positives = 108/172 (62%), Gaps = 10/172 (5%)
Frame = +1
Query: 271 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 450
R K+ VVGDG GKT LL V+T FP EYVPTVF+NYV VDG+ V++ALWDTAGQE
Sbjct: 8 RRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQE 67
Query: 451 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 630
+YERLRP+SY + + LV +++ S S ENV KW E+ +VP +LV K DLRS
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD 127
Query: 631 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVR 756
A+ V +Q+ + + ++I A +ECS+L +D+VFE A R
Sbjct: 128 PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATR 179
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 101 bits (243), Expect = 8e-23
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Frame = +1
Query: 268 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 447
+ K+ VVGDG VGK+ L ++ F +EY PT+ D+Y +DGE + + DTAGQ
Sbjct: 7 REYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQ 66
Query: 448 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF--SASVPIVLVATKIDL 621
E+Y +R FL+ Y++ SRSS++ + +Y ++ + P+VLVA K DL
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDE-ISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 622 RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVR 756
+ + VV+ EG++L K + + VE SA R+N++E F VR
Sbjct: 126 EA--ERVVSRAEGEQLAKSMHCLY-VETSAKLRLNVEEAFYSLVR 167
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 88.2 bits (209), Expect = 1e-18
Identities = 47/158 (29%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Frame = +1
Query: 274 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 450
+K+ ++GD VGK+CLL ++ + F ++ T+ D + I +DG+ +++ +WDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 451 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLRS 627
+ + Y L+ Y V + S++N V W+ + +H S +V +L+ K D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDN-VRTWFSNVEQHASENVYKILIGNKCD--C 126
Query: 628 SDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 741
D+ V+ ++G+ L ++ +E SA +N+DE F
Sbjct: 127 EDQRQVSFEQGQALADEL-GVKFLEASAKTNVNVDEAF 163
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 87.0 bits (206), Expect = 3e-18
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Frame = +1
Query: 256 MGTTKR--LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMA 426
M KR LK+ ++GD VGKTCL+ + +F EY T+ +++ + VD + V +
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 427 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA----SVPI 594
LWDTAGQE ++ L Y +C ++ Y+V + S+++ V W E + ++ + P
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDS-VENWRQEFLYQTSQDECAFPF 119
Query: 595 VLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLV--ECSALERINMDEVFEEAVR 756
++V +ID +S +AV + K K ++++ E SA E N+ ++FE R
Sbjct: 120 IIVGNQIDKDASKRAVSLHRALDYCKSK-HGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 84.2 bits (199), Expect = 2e-17
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Frame = +1
Query: 277 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQED 453
K ++GD VGK+ LL +TRNEF E T+ + +I +D + ++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 454 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLRSS 630
Y + Y L+ Y + +SS++N V +W EL+ H +++ I+LV K DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDN-VGRWLKELREHADSNIVIMLVGNKTDL--L 128
Query: 631 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 744
V+T+E + + + +E SA++ N++E F+
Sbjct: 129 HLRAVSTEEAQAFAAENNLS-FIETSAMDASNVEEAFQ 165
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 83.0 bits (196), Expect = 4e-17
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +1
Query: 256 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 435
M K +I V+G VGK+ L Y N F E Y PT+ + + +I G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 436 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATK 612
TAGQ++Y L + +++ YS+ S+SS+E V L H VPIV+V K
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNK 120
Query: 613 IDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 744
DL + VT +EGK L + + A E SA N+ FE
Sbjct: 121 SDLHM--QRAVTAEEGKALANEWKCA-WTEASARHNENVARAFE 161
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 79.4 bits (187), Expect = 5e-16
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +1
Query: 277 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 453
K+ +VGDG GKT + + EF ++Y+ T+ + + H + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 454 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 633
LR Y Q C ++ + V SR +Y+NV H W+ +L ++PIVL K+D++
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKERK 129
Query: 634 -KAVVTTQEGKK 666
KA T KK
Sbjct: 130 VKAKAITFHRKK 141
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 78.6 bits (185), Expect = 9e-16
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Frame = +1
Query: 274 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQE 450
+K+ ++GD +GKT L+ Y + F EE T+ N++ I++ ++ ++WD GQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 451 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKID---- 618
++ + P+ L + + SR S N + +WY + + F+ + +L+ TK D
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDL-SRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDHFMT 129
Query: 619 LRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 744
D+ +T Q ++ K ++A+ LV CS IN+ ++F+
Sbjct: 130 FPREDQEEITKQ-ARRYAKAMKAS-LVFCSTSHSINVQKIFK 169
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 78.6 bits (185), Expect = 9e-16
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Frame = +1
Query: 277 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 453
K+ ++GD VGK+CLL + + + E Y+ T+ D + ++G+ V++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 454 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA-SVPIVLVATKIDLRSS 630
+ + Y + ++ Y V + S+ N V +W E+ ++ V +LV K D+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNN-VKQWLQEIDRYAVEGVNRLLVGNKSDM--V 126
Query: 631 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 741
DK VV K+ + L E SA + N+++ F
Sbjct: 127 DKKVVEYSVAKEFADSLNIPFL-ETSAKDSTNVEQAF 162
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 78.2 bits (184), Expect = 1e-15
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
Frame = +1
Query: 268 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAG 444
++ K+ +G+ VGKT L+ + ++F Y T+ +++ + ++ V + LWDTAG
Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 445 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDL 621
QE + L P ++ ++ Y + + +S+ N KW +++ V IVLV K DL
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDL 128
Query: 622 RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEE 747
+DK VT +EG+K K+++ H+ E SA N+ +F +
Sbjct: 129 --ADKRQVTQEEGEKKAKELKIMHM-ETSAKAGHNVKLLFRK 167
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 77.0 bits (181), Expect = 3e-15
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Frame = +1
Query: 274 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQE 450
LK+ ++G+ VGKT ++ Y +F ++Y T+ +++ + VD + V + LWDTAGQE
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 451 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE-LKHFSAS----VPIVLVATKI 615
++ L Y +C ++ Y V + S+E + W E L S S P +L+ K+
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFE-TLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 616 DLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEEAVR 756
D+ K +V+ + + E SA E IN+ E FE +
Sbjct: 128 DV-EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 71.3 bits (167), Expect = 1e-13
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Frame = +1
Query: 235 SDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVD-G 408
S+ A + + T + K+ ++GD VGK+ L+ + +++F + T+ ++ + +D
Sbjct: 3 SNTAPKNVVTINQ-KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDEN 61
Query: 409 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSAS 585
V++ +WDTAGQE Y+ L P+ Y NC +V Y + +S E W EL +
Sbjct: 62 TSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQRQAPEG 120
Query: 586 VPIVLVATKIDLRSSDKAV 642
+ I L K+DL +AV
Sbjct: 121 IVIALAGNKLDLAQERRAV 139
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 64.1 bits (149), Expect = 2e-11
Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 8/168 (4%)
Frame = +1
Query: 274 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-----EDVEMALWDT 438
+KI + G GK+CLL + +N++ ++ TV ++ I G + +++ +WDT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 439 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKI 615
AGQE + + Y ++ Y V ++ S+E + W +++ + S + +VL +K
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEE-LSSWLSDIRAMAPSTICVVLAGSKS 128
Query: 616 DLRSSDKAVVTTQEGKKL--KKKIRAAHLVECSALERINMDEVFEEAV 753
DL++ + V+T+E + +K I +AH E S+ N++E F V
Sbjct: 129 DLQNQRQ--VSTEEAAEFCSEKHISSAH--ETSSYTGSNVEECFLSVV 172
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 52.4 bits (120), Expect = 7e-08
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
Frame = +1
Query: 268 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-EDVEMALWDTAG 444
K +++ + GD VGK+ L+ + + +P VF D +DV + L DT
Sbjct: 2 KEVRVVICGDQGVGKSSLISALIQEDNVTS-IPKVFPIISIPSNPDSNDDVSLVLVDT-- 58
Query: 445 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI-DL 621
Q D L+ ++C SYE V W P + +VPIVL K DL
Sbjct: 59 QSDSNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDL 118
Query: 622 RSSDKAVVTTQEGKKLKKKIRAAH-LVECSALERINMDEVF 741
+ E L + + + CSALE+IN++E+F
Sbjct: 119 DNYQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELF 159
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.9 bits (74), Expect = 0.025
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 268 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 447
+ ++I +VG GKT +LY E +PT+ N TV+ ++ +WD GQ
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYRNISFTVWDVGGQ 71
Query: 448 EDYERLRPL 474
+++RPL
Sbjct: 72 ---DKIRPL 77
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.033
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +1
Query: 262 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 441
+ K ++I ++G GKT +LY N+ +PTV N TV ++++ +WD
Sbjct: 18 SNKEMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVE---TVTYKNIKFNVWDVG 73
Query: 442 GQEDYERLRPL 474
GQ +++RPL
Sbjct: 74 GQ---DKIRPL 81
>SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 338
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 338 LVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATSDKPISPQI 213
L + ++ VLPT T V++NL + ++ A PI+P +
Sbjct: 206 LATSKARSVLPTSYGRTDVVYNLQRLALLTTALGQTPINPHL 247
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = -2
Query: 306 NHTISNNSYLQSLRRSHGACRDIR*TNITTNSRFKTLLYKHL---KIIKQVPHMEGELYG 136
N NN+ L+S + C ++ N+T + L++KH+ + ++ + G+L
Sbjct: 805 NMQSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSL 864
Query: 135 FVRN--SVLDCSYHGDIMILSNLEEYSR*RADLKLNNAR 25
++N S L+ + + IL+ L E S+ L+ +A+
Sbjct: 865 DLKNLRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQ 903
>SPBC336.14c |ppk26||serine/threonine protein kinase
Ppk26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -2
Query: 144 LYGFVRNSVLDCSYHGD---IMILSNLEEYSR*RADLKLNNARAHLQP 10
LYG ++S C++ D I NLE+YS KLN A A QP
Sbjct: 45 LYGSCKHSENGCAFRHDGPFIPSSENLEQYS---VKKKLNAASASFQP 89
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.8
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = -3
Query: 449 SCPAVSHNAISTSSPSTVMWPT*-LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFN 273
S P S +++ SS S + + LS+++ T +S + TYS V+P+ + + +
Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSS--LSTYSSSVIPSSSTLVSSSSS 683
Query: 272 LFVVPMVRAATSDKPISPQIHVLKLY 195
L V A++S PI ++ Y
Sbjct: 684 LIVSSSPVASSSSSPIPSSSSLVSTY 709
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 6.7
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 437 VSHNAISTSSPSTVMWP-T*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVV 261
VS +ST P + ++P T ++ T G ++F T S Q P+ T V + +
Sbjct: 1411 VSSTVVSTVVPGSTVYPVTHVTTTTGVSGESSAFTYTTSSTQYEPS----TVVTTSYYTT 1466
Query: 260 PMVRAATSDKPIS 222
+ +A + + +S
Sbjct: 1467 SVYTSAPATETVS 1479
>SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 655
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 39 VLNRPAIANIPPSLIRSLYHRDKNN 113
V N ANI P L+RS + RDK N
Sbjct: 428 VTNSGKDANIIPCLLRSKHKRDKAN 452
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 8.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 491 FVCVYDSGLNRS*SSCPAVSHNAISTSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYS 321
F YD L + C ++HN +S SPS V++ +T+ Y +S + T+S
Sbjct: 281 FAFRYDKSLGKF---CSFLNHNLLSLCSPSGVLFGHNDIDTIYVYILTHSGTLETFS 334
>SPAC29B12.04 |snz1||pyridoxine biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 676 KIRAAHLVECSALERINMDEVFEEAV 753
K+R H VE LE I +D + E V
Sbjct: 83 KVRIGHFVEAQILESIGVDYIDESEV 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,184,431
Number of Sequences: 5004
Number of extensions: 67257
Number of successful extensions: 223
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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