Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0031
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.089
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   1.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.4  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.089
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 178 LYFLLLMCLYH-YCKFIFIVKNILAPC 255
           ++ L L+C+YH +C FI    ++L  C
Sbjct: 158 VHLLFLLCIYHFFCAFIIFTMHLLFCC 184



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/24 (29%), Positives = 16/24 (66%), Gaps = 5/24 (20%)
 Frame = +1

Query: 175 CLYF-----LLLMCLYHYCKFIFI 231
           C+Y+     ++L+C+Y++C+   I
Sbjct: 284 CIYYFYCALIILLCIYYFCRAFII 307



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 184 FLLLMCLYHYCKFIFIVKNIL 246
           F LL   Y YC FI    ++L
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLL 161



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 175 CLYFLLLMCLYHYCKFIFIVKNIL 246
           C+Y+   M L   C FI    ++L
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLL 280


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 425 AKFSRNEQYCIGLGVFFDIYFSTTRHCVIL 514
           AKF+  + + I  G FF I  +TT + +I+
Sbjct: 275 AKFTAADFFEIDRGTFFGILSTTTSYFIIM 304


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 422 CAKFSRNEQYCIGLGVFFDIYFS 490
           CAK  + ++YC     FF ++ +
Sbjct: 104 CAKIKKTKRYCYYYYAFFGVHLA 126


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 268  KEILKFYFFTVFPLFRFNA*IILLKF 345
            KE+++    +VF  F FNA  +L+ F
Sbjct: 1259 KELIELRNKSVFAFFMFNALFVLVVF 1284


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 268  KEILKFYFFTVFPLFRFNA*IILLKF 345
            KE+++    +VF  F FNA  +L+ F
Sbjct: 1259 KELIELRNKSVFAFFMFNALFVLVVF 1284


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 513 YHKTKKEPIFYMTAYNI 563
           YH+ K+EPI+    ++I
Sbjct: 46  YHRVKEEPIYESCRFSI 62


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 513 YHKTKKEPIFYMTAYNI 563
           YH+ K+EPI+    ++I
Sbjct: 46  YHRVKEEPIYESCRFSI 62


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 243 LSTMLKKLKRNLEILFFY 296
           L   L+++K NLE ++FY
Sbjct: 306 LFNSLRQMKNNLERIYFY 323


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 243 LSTMLKKLKRNLEILFFY 296
           L   L+++K NLE ++FY
Sbjct: 306 LFNSLRQMKNNLERIYFY 323


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 243 LSTMLKKLKRNLEILFFY 296
           L   L+++K NLE ++FY
Sbjct: 306 LFNSLRQMKNNLERIYFY 323


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 183 LPVVDVFISLL*IYLYCKEYLSTMLKKLKRNLEILFFYSISTVPI 317
           L  +  F+ LL  Y+Y K Y     K +  +   LFF S   + I
Sbjct: 3   LAYIACFLLLL-YYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVI 46


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 513 YHKTKKEPIFYMTAYNI 563
           YH  K+EPI+    ++I
Sbjct: 46  YHSVKEEPIYESCRFSI 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,403
Number of Sequences: 336
Number of extensions: 4163
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)