Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0030
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.47 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.4  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   5.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 327 PTPPPIPEVIQRALAYLATAPP 392
           P P P+ EV Q+  +  A APP
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAPP 413


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 449 LTLFLSKLTE*LWPVVFRLWG 387
           +T FLS L +  W + +R +G
Sbjct: 88  ITAFLSVLPQLAWDITYRFYG 108


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 421 NNYGLLFSGCGGAVA 377
           N+YG  +SG GG VA
Sbjct: 389 NHYGYHYSGDGGEVA 403


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 421 NNYGLLFSGCGGAVA 377
           N+YG  +SG GG VA
Sbjct: 337 NHYGYHYSGDGGEVA 351


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 383  GGEVCESALDDFRNWGWCG 327
            GG V    LDDF+N   CG
Sbjct: 2657 GGMVWALDLDDFKNRCGCG 2675


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = +3

Query: 276 LSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
           ++ +    G  P    +P P         A  Y  +  P+PE+ RP
Sbjct: 184 IALVLPTQGASPLPLLVPIPQRTASTASSASNYSPSQSPEPESVRP 229


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 65  YRDRHKSEENNKGLHV 18
           YR ++K E    G+HV
Sbjct: 109 YRSKYKDELEKNGIHV 124


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 177 QRRYHFQSHKSIGRTHQARCCSPA 106
           +RR+H   HK  G     R  +PA
Sbjct: 257 RRRHHLVHHKCGGEEEAERAPAPA 280


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +3

Query: 246 YPSEDGGTIQLSYIANENGFQPQGSHLPTPPPI 344
           YP   G +  L+     N +    S LP P P+
Sbjct: 210 YPFYPGTSAMLAAYQRYNPYLQAASMLPKPTPL 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,993
Number of Sequences: 336
Number of extensions: 3227
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)