Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0030
(588 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 36 0.025
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 31 0.92
SB_28560| Best HMM Match : NHL (HMM E-Value=1.8e-14) 29 2.1
SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_42820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39) 29 2.8
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 3.7
SB_14229| Best HMM Match : VAR1 (HMM E-Value=5) 29 3.7
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 29 3.7
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 29 3.7
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_2431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4) 28 4.9
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 28 4.9
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 28 6.5
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 27 8.6
SB_17683| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_26931| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 27 8.6
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 35.9 bits (79), Expect = 0.025
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = +1
Query: 169 SPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFL 348
S LPS+ L+ +S+L + L + S + LS PTS + L P FL
Sbjct: 1156 SSLPSDFLTSSSSLSDFLTSSSLLSDFLTSSSSLSVFPTSSSLPSDFLTSSSLP--SDFL 1213
Query: 349 KSSSALS--HTSPPHPHSLKTTGHNYSVNLLKKRVNSVILVEFEMPIYFLTYLSN 507
SSS+LS TS P T+ + S L SV +P FLT S+
Sbjct: 1214 TSSSSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSSSS 1268
>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/101 (24%), Positives = 46/101 (45%)
Frame = +1
Query: 247 TQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
T ++L + P+SP T+SS R H +PHH + + T+P P + T +++
Sbjct: 728 TTIHIIILITAPSSPS-TSSSERHHHHPHHQHSAIITIHIIITAPSPPSTSSTQRYHHHP 786
Query: 427 NLLKKRVNSVILVEFEMPIYFLTYLSNFRYSFLYFCTELFY 549
+ + ++ ++ + L + S Y FC LFY
Sbjct: 787 HHHHSAIITIYII-----VNHLCHFSVGCYCCRPFCRYLFY 822
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 265 VLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
++ + P+SP T+SS R H +PHH ++ + T+P P + + H++
Sbjct: 470 IIITAPSSPS-TSSSQRHHHHPHHHHSAITTIHIIITAPLSPSTSSSQRHHH 520
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 265 VLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
++++ P SP T+SS R H +PHH ++ + T+P P + + H++
Sbjct: 48 IITTVP-SPTSTSSSQRYHHHPHHHHSAITTIHIIITAPSPPSTSSSQRHHH 98
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/93 (21%), Positives = 44/93 (47%)
Frame = +1
Query: 142 NTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDH 321
+ + + +++ +PS + TS+ + + + S ++ + P SP T+SS R H
Sbjct: 41 SAITTIHIITTVPSP--TSTSSSQRYHHHPHHHHSAITTIHIIITAP-SPPSTSSSQRHH 97
Query: 322 IYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
+PHH + + T+P P + + H++
Sbjct: 98 HHPHHHHSAIITIHIIITAPSPPSTSSSQRHHH 130
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
SP T+SS R H +PHH ++ + T+P P + + H++
Sbjct: 640 SPPSTSSSQRHHHHPHHYHSAITTINIIITAPSPPSTSSSQRHHH 684
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
SP T+SS R H +PHH ++ + T+P P + + H++
Sbjct: 216 SPPSTSSSQRYHHHPHHHHSAITTIHIIITAPSPPSTSSSQRHHH 260
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
SP T+SS R H +PHH ++ + T+P P + H++
Sbjct: 378 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSPSISSSQRHHH 422
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
SP T+SS R H +PHH + + T+P P + + H++
Sbjct: 444 SPPSTSSSQRHHHHPHHHHSAIITIHIIITAPSSPSTSSSQRHHH 488
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
SP T+SS R H +PHH ++ + T+P P S+ ++ N+
Sbjct: 150 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSP-SISSSQRNH 193
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
SP T+SS R H +PHH ++ + T+P P S+ ++ N+
Sbjct: 312 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSP-SISSSQRNH 355
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 265 VLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPH-SLKTTGHNY 420
++ + P SP T+SS R H +PHH + + T+P P SL H++
Sbjct: 502 IIITAPLSPS-TSSSQRHHHHPHHHHSAIITIHIIITAPSPPSISLSQRHHHH 553
Score = 24.2 bits (50), Expect(2) = 2.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 352 SSSALSHTSPPHPHSLKTTGH 414
SSS L H P H HS TT H
Sbjct: 711 SSSQLHHHHPYHYHSAITTIH 731
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 286 SPMRTASSLRDHIYPHH 336
SP T+SS R H +P+H
Sbjct: 672 SPPSTSSSQRHHHHPYH 688
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 328 PHHPQFLKSSSALSHTSPPHPHSL-KTTGHNYSVNLLKK 441
PHHP L HT+P HPH L K T ++++ L K+
Sbjct: 237 PHHPLGLSK-----HTAPDHPHGLSKHTAPDHTIGLYKR 270
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 0.92
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +3
Query: 105 KQESSIEPDGSYQ---YSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQ 275
K++ S E SY+ Y+ ETG+ + E N +EPA + +G F P + Q
Sbjct: 848 KRKRSDEEFDSYESGDYTDETGSSCDSEEYTDTDN---DEPAHKNDGSF--PRRNESPSQ 902
Query: 276 LSYIANENGFQPQGSHLPTPPPIP 347
+ P G +P PPP P
Sbjct: 903 TPGGSESPSASPPGGSVPPPPPPP 926
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 147 SYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSHL 326
S +TG G+ R + E ++ V+G+ + SED G ++ + + G +P H+
Sbjct: 1833 SKDTGEGVVGTSREPTRPGSKYEESVSVDGKKKEDSEDSGLVEFGF-PRQTGQEPLNFHI 1891
>SB_28560| Best HMM Match : NHL (HMM E-Value=1.8e-14)
Length = 453
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +1
Query: 163 MVSPLPSEALSKTSALKNLLYR-----LKVNSSTQARTVVLSSCPTSPMRTASSLRDHIY 327
+V+ + A+ + S+ L+Y L + SST A VV SSC SP + +D+IY
Sbjct: 189 LVADRGNRAIKRFSSSGELIYSYVDLSLDITSSTDA-LVVKSSCLLSPQNVVTDAQDNIY 247
>SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 216 PALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPP 341
P + F YP +D Y A + PQG+ LP PPP
Sbjct: 110 PPVDQYSAFPYPPQDQQAPP--YPAQNQYWNPQGTSLPPPPP 149
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 166 VSPLPSEALSKTSALKNLLYRLKVNSST--QARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
VS + + A S TS N L LK S+T Q T S P+ S ++ PH P
Sbjct: 36 VSSVSASASSSTSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTP 95
Query: 340 QFLKSSSALSHTSPP 384
+S++ T PP
Sbjct: 96 PSCQSNTPRPLTPPP 110
>SB_42820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYL-ATAPPQPENN 407
PTPPP PEVI R+ A L A P P N
Sbjct: 172 PTPPP-PEVIYRSCAELKAARPSTPSGN 198
>SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39)
Length = 258
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 63 VAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGA 191
++A SPT+P + K E SIEP+ SY S S RGA
Sbjct: 195 LSAEASPTQPT-VRKAEHSIEPNPSYSKSRGKTAQASQHSRGA 236
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 295 RTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTG 411
RT SLR+H P P + + L + PHP+ +G
Sbjct: 1407 RTTESLREHARPLRPLAIGTRVFLQNQQGPHPNKWDRSG 1445
>SB_14229| Best HMM Match : VAR1 (HMM E-Value=5)
Length = 356
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Frame = +1
Query: 235 VNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGH 414
++++ +ART VL SC T S+ + +PP+ +L +G+
Sbjct: 36 LDTAARARTPVLYSCKTPKESPQSATLATPRQKSNGAFGYKKTFNQAAPPYQKALDESGY 95
Query: 415 NYSV----NLLKKRVNSVILVEFEMPIYFLTYLSNFRYSFL 525
NY++ N KR N + + P + +N + FL
Sbjct: 96 NYTLHYEPNTTNKRKNRQRNIIWYNPPFSKNTSTNIGHKFL 136
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 324 LPTPPPI--PEVIQRALAYLATAPPQPENNRP 413
LPTPPP P+ + L T PP+P RP
Sbjct: 135 LPTPPPPTPPQSTPKPRRVLPTPPPKPPTPRP 166
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 241 SSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTG 411
+STQ + TS SS H PQ +SSA+ HT+ P + TTG
Sbjct: 361 TSTQTQASSTVGDTTSTQTQTSSTVGHTTSTQPQ---TSSAVDHTTSTQPQTSSTTG 414
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = +3
Query: 246 YPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQR---ALAYLATAPPQP 398
YPS+D Q Y A + G Q S P P P + A AY AP P
Sbjct: 1269 YPSQDAA-YQTGYPAYQQGGQAYPSAAPAPAPAAQAYPSAAPATAYPTQAPANP 1321
>SB_2431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPP 392
PTPPP PEVI R+ A L A P
Sbjct: 15 PTPPP-PEVIYRSCAELKAARP 35
>SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4)
Length = 954
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 23 EDLCYSLRTCDGRGSCTPITY*THPDP 103
E+ C+ +RT + R +C PI +HP+P
Sbjct: 169 EEFCHFVRT-EARTACNPIMMNSHPNP 194
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 28.3 bits (60), Expect = 4.9
Identities = 28/111 (25%), Positives = 47/111 (42%)
Frame = +1
Query: 193 SKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSH 372
SKT++ ++L KV T + SS + + SL P SSS+ S
Sbjct: 63 SKTNSF-DVLTMTKVVFRTMRVSQTRSSSSSQSLPPPPSLSSQTSSSSPP-PSSSSSQSL 120
Query: 373 TSPPHPHSLKTTGHNYSVNLLKKRVNSVILVEFEMPIYFLTYLSNFRYSFL 525
PP S ++ H++ +LL + + +V M L +S+ SF+
Sbjct: 121 PPPPSSSSQPSSHHHHHHHLLHNHNHHLFVVAINMIAAILVMISSLSSSFV 171
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 355 SSALSHTSPPHPHSLKTTGHNYS 423
SS S++ P H HS K+ GH+++
Sbjct: 59 SSVSSYSPPKHKHSSKSNGHHHN 81
>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 139 TNTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLR 315
T T R + P PS A + ++ +ST+ + LSS TS +R AS+ R
Sbjct: 165 TGTSSRTDRSRPAPSPARVNQATATQSAKKVGSTASTEKQKKELSSSSTSSLRGASARR 223
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 27.9 bits (59), Expect = 6.5
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +1
Query: 133 GPTNTLMRLEMVSPLPSEALSKTSALK---NLLYRLKVNSSTQARTVVLSSCPTSPMRTA 303
G ++T + EMVS +PS + K ++ K +SS + V ++P+ T+
Sbjct: 1197 GSSSTAVSKEMVSSIPSPKANVVVNCKLPSSVDVDGKRSSSPDVSSSVGEHSESNPVDTS 1256
Query: 304 SSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKK 441
+S+ D I S L ++ P P + K T + + +KK
Sbjct: 1257 TSVFDRISTKENVASHVSRPLGGSTSPSPFTSKRTSPGLNESPMKK 1302
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 306 QPQGSHLPTPPPIPEVIQRAL-AYLATAPPQP-ENNRP 413
+PQ SH P PP P+ R L ++ P +P E++RP
Sbjct: 151 RPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRP 188
>SB_17683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/76 (31%), Positives = 32/76 (42%)
Frame = +3
Query: 105 KQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQLSY 284
K+ S E + S Q SYE N ISA+ + +PA+Q E + S G L+
Sbjct: 172 KEFVSQEQNDSGQPSYEVKNPISASGSQGIPPGKVLQPAVQAEDHSSFLSGTSGNTILAG 231
Query: 285 IANENGFQPQGSHLPT 332
N Q S PT
Sbjct: 232 APNFMFPAQQSSGEPT 247
>SB_26931| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 291
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Frame = +1
Query: 358 SALSHTSPPHPHSLKTTGHNY-------SVNLLKKRVNSVILVEFEMPIYF 489
++ T+PP+ +L +G+NY +V K R + IL +F+M ++F
Sbjct: 175 ASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNHKTRKRNNILCDFKMSLWF 225
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,408,175
Number of Sequences: 59808
Number of extensions: 407491
Number of successful extensions: 1508
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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