Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0030
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 33 0.15
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 31 0.80
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 29 1.9
Z93387-4|CAI91177.1| 333|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93387-3|CAB07652.1| 352|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 28 4.3
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 28 4.3
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 28 4.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 4.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 4.3
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 28 5.7
U42832-2|AAA83572.1| 558|Caenorhabditis elegans Udp-glucuronosy... 28 5.7
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical p... 27 7.5
Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL132877-8|CAD91705.1| 339|Caenorhabditis elegans Hypothetical ... 27 7.5
AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical ... 27 7.5
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 27 7.5
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 9.9
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 9.9
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 9.9
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 9.9
AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (... 27 9.9
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 243 QYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQ 395
Q + GG ++ +++ G QPQG + PP P IQ+ + + T P Q
Sbjct: 640 QQMHQQGGPQLMNRPSSQMGVQPQGGMMSRPPSQPHYIQQGPSSMNTPPQQ 690
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 30.7 bits (66), Expect = 0.80
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = +3
Query: 243 QYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQP 398
Q P+E TIQ + P P PPP P VI A A A P+P
Sbjct: 335 QLPAEAPSTIQF---VEPSAAPPTNIPPPPPPPPPMVISSAAASFAAPAPKP 383
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 30.7 bits (66), Expect = 0.80
Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Frame = +3
Query: 66 AAPQSPTEPI--PILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQ 239
AAP +P EP+ P + E++ P + + + A GA + GA PA G
Sbjct: 101 AAPTAPAEPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAADGASYSAGAAAPA----GG 156
Query: 240 FQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLA--TAP-PQP 398
YP++ + Y E G P P P P P A LA TAP P P
Sbjct: 157 ASYPAKK-RRVARDYA--EGGAAPAAPAEPAPEPAPAPAPAPEAALAPETAPAPAP 209
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 175 LPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKS 354
+ +E +S S + L+ R + + T LS S + ASS+ P P++ +
Sbjct: 1 MSNERVSTGSLGERLMLRTRSTRGSVRET--LSKAIRSTLGRASSMERKDMPDRPKYGTA 58
Query: 355 SSALSHTSPPHP 390
+A++ T+PP P
Sbjct: 59 LTAMTSTTPPSP 70
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 175 LPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKS 354
+ +E +S S + L+ R + + T LS S + ASS+ P P++ +
Sbjct: 1 MSNERVSTGSLGERLMLRTRSTRGSVRET--LSKAIRSTLGRASSMERKDMPDRPKYGTA 58
Query: 355 SSALSHTSPPHP 390
+A++ T+PP P
Sbjct: 59 LTAMTSTTPPSP 70
>Z93387-4|CAI91177.1| 333|Caenorhabditis elegans Hypothetical
protein T02E9.2b protein.
Length = 333
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 243 QYPSEDG-GTIQLSYIANENGFQPQGSHLPTPPPI----PEVIQRALAYLATAPPQP 398
QYP + G G Q + A +QPQG + P P+ P+ A Y A P P
Sbjct: 67 QYPQQGGYGGAQQGFQAAPAPYQPQGGYQAGPAPVQGYQPQAQVPAGGYQAPVQPAP 123
>Z93387-3|CAB07652.1| 352|Caenorhabditis elegans Hypothetical
protein T02E9.2a protein.
Length = 352
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 243 QYPSEDG-GTIQLSYIANENGFQPQGSHLPTPPPI----PEVIQRALAYLATAPPQP 398
QYP + G G Q + A +QPQG + P P+ P+ A Y A P P
Sbjct: 67 QYPQQGGYGGAQQGFQAAPAPYQPQGGYQAGPAPVQGYQPQAQVPAGGYQAPVQPAP 123
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 786 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 815
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 820 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 849
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 916 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 945
>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
F52G2.2a protein.
Length = 1319
Score = 28.3 bits (60), Expect = 4.3
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 126 PDGSYQYSYETGNGISAAERGALKNIGAEE----PALQVEGQFQYPSEDGGTIQLSYIAN 293
P GSYQ S++ + SAA G ++ ++ + +Q P + Q SY
Sbjct: 1168 PVGSYQSSHQNFDNRSAAHNGDGRSTSQSHHSAGGSMNHQNFYQPPVYQSSSSQQSYQPR 1227
Query: 294 ENGFQPQGSHLPTPPP 341
NG P G P PPP
Sbjct: 1228 YNG-APSG---PLPPP 1239
>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical protein
F52G2.2b protein.
Length = 1129
Score = 28.3 bits (60), Expect = 4.3
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 126 PDGSYQYSYETGNGISAAERGALKNIGAEE----PALQVEGQFQYPSEDGGTIQLSYIAN 293
P GSYQ S++ + SAA G ++ ++ + +Q P + Q SY
Sbjct: 978 PVGSYQSSHQNFDNRSAAHNGDGRSTSQSHHSAGGSMNHQNFYQPPVYQSSSSQQSYQPR 1037
Query: 294 ENGFQPQGSHLPTPPP 341
NG P G P PPP
Sbjct: 1038 YNG-APSG---PLPPP 1049
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 786 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 815
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 820 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 849
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 916 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 945
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 4.3
Identities = 31/115 (26%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Frame = +3
Query: 60 AVAAPQSPT--EPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVE 233
A+ P PT PIP + + P I+ + R L ++ P
Sbjct: 947 AIVKPPMPTLSMPIPPVSTPIMVSPQ-PIPIPKPVDASIAKSPRSELDDLWDTSPP---S 1002
Query: 234 GQFQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPI---PEVIQRALAYLATAP 389
Q YP IQ SY N P +PTPPP V+Q+A A+ P
Sbjct: 1003 NQTSYPPAPRN-IQPSYSPAPNFANPTAPSVPTPPPAVSSAPVLQQATLGQASIP 1056
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 820 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 849
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 331 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
+HP+ SSS+ S T+PPH H L T ++SV
Sbjct: 916 YHPK-APSSSSSSSTNPPHQHQL-THNASFSV 945
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 315 GSHLPTPPPIPEVIQRALAYLATAPPQP 398
G +P PPP P + + LA APP P
Sbjct: 670 GGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 315 GSHLPTPPPIPEVIQRALAYLATAPPQP 398
G +P PPP P + + LA APP P
Sbjct: 670 GGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 291 NENGFQPQGSHLPTPPPIPEVIQ 359
N G QGSHL PPP P+ Q
Sbjct: 737 NTMGHMGQGSHLQGPPPPPQHFQ 759
>U42832-2|AAA83572.1| 558|Caenorhabditis elegans
Udp-glucuronosyltransferase protein57 protein.
Length = 558
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 190 LSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHH 336
+S A+K +L K ++ + + S TSP A + DHI HH
Sbjct: 439 ISLYGAMKKVLESAKYKNTAKEMSKEFKSRTTSPFAAALHVIDHIGRHH 487
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.9 bits (59), Expect = 5.7
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +3
Query: 96 PILKQESSI-EPDGSYQYSYETGNGISA---AERGALKNIGAEEPALQVEGQFQYPSEDG 263
P++ S + E GS+ Y G SA AE A + +G+E V+ QF +
Sbjct: 1078 PVVSSISQLLEEAGSFSYVEGHGTATSAGDSAESMAYQKLGSELIMSSVKAQFGHCEVAS 1137
Query: 264 GTIQLSYIAN--ENGFQPQGSH 323
G IQL +++ ++G P H
Sbjct: 1138 GLIQLMKVSSIGKHGIIPSIVH 1159
>Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 27.5 bits (58), Expect = 7.5
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Frame = +1
Query: 232 KVNSSTQARTVVLSSCPTSPMRTASSL-RDHIYPHHPQFLKSSSALSH-------TSPP- 384
K+N T + L+S +P+ ++L RD+ YP P+ ++ AL H T P
Sbjct: 428 KINDVTSLSDI-LNSVSETPISLLNTLYRDNAYPRFPEHIQVLLALRHFLRIDGNTGIPL 486
Query: 385 -HPHSLKTTGHNYSVNLLKKRVNSVILVEFEMPIYFLTYLSNF 510
+L+ G N + ++K + + + + F++PI LT +N+
Sbjct: 487 VLASNLQDDG-NINKQKMRKEMRAALDISFKIPI--LTVKANW 526
>Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 27.5 bits (58), Expect = 7.5
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Frame = +1
Query: 232 KVNSSTQARTVVLSSCPTSPMRTASSL-RDHIYPHHPQFLKSSSALSH-------TSPP- 384
K+N T + L+S +P+ ++L RD+ YP P+ ++ AL H T P
Sbjct: 428 KINDVTSLSDI-LNSVSETPISLLNTLYRDNAYPRFPEHIQVLLALRHFLRIDGNTGIPL 486
Query: 385 -HPHSLKTTGHNYSVNLLKKRVNSVILVEFEMPIYFLTYLSNF 510
+L+ G N + ++K + + + + F++PI LT +N+
Sbjct: 487 VLASNLQDDG-NINKQKMRKEMRAALDISFKIPI--LTVKANW 526
>AL132877-8|CAD91705.1| 339|Caenorhabditis elegans Hypothetical
protein Y105E8B.2b protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/64 (18%), Positives = 34/64 (53%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSS 360
++A S + +++ L +K+ T+ + S + +L+++++ ++ QF+ +S
Sbjct: 11 TDAFSPSDYIRDRLKGVKIGDETRKLRHLRSEMGALNHASQETLKNNVFRNYQQFIDASK 70
Query: 361 ALSH 372
+SH
Sbjct: 71 EISH 74
>AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical
protein Y105E8B.2a protein.
Length = 686
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/64 (18%), Positives = 34/64 (53%)
Frame = +1
Query: 181 SEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSS 360
++A S + +++ L +K+ T+ + S + +L+++++ ++ QF+ +S
Sbjct: 11 TDAFSPSDYIRDRLKGVKIGDETRKLRHLRSEMGALNHASQETLKNNVFRNYQQFIDASK 70
Query: 361 ALSH 372
+SH
Sbjct: 71 EISH 74
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 249 PSEDGGTIQLSYIANE---NGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 404
P+E G I L + +G +P + P PPP P LA APPQP+N
Sbjct: 728 PAEKSG-ISLGKVVESVEASGNRPSSTPPPPPPPPP---------LAAAPPQPKN 772
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +1
Query: 136 PTNTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLR 315
PTN +V P+ ++ ++ + + + L NSS A T S +++ +S+
Sbjct: 1161 PTNITSEPVIVQPITAQVITHLATPSPVSHSLSSNSSPSATT----HSNMSSIQSTTSVP 1216
Query: 316 DHIYPHHPQFLKSSSALSHTSPPHP 390
+ P S S S PHP
Sbjct: 1217 GRRFTVQPVSQAESGISSSISTPHP 1241
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +1
Query: 136 PTNTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLR 315
PTN +V P+ ++ ++ + + + L NSS A T S +++ +S+
Sbjct: 1161 PTNITSEPVIVQPITAQVITHLATPSPVSHSLSSNSSPSATT----HSNMSSIQSTTSVP 1216
Query: 316 DHIYPHHPQFLKSSSALSHTSPPHP 390
+ P S S S PHP
Sbjct: 1217 GRRFTVQPVSQAESGISSSISTPHP 1241
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 229 TCKAGSSAPMFLRAPRSAAEIPFPVS*EYW*DPSGSM 119
TC +G+S+ ++ P + P S YW D + +M
Sbjct: 1471 TCFSGASSENYMNLPEVRTALHIPTSLPYWTDCNDNM 1507
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 300 GFQPQGS-HLPTPPPIPEVIQRALAYLATAPP 392
G +P+ S H PTPPP P +Y A APP
Sbjct: 1218 GAKPEASSHAPTPPPQPHP-----SYQAPAPP 1244
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 300 GFQPQGS-HLPTPPPIPEVIQRALAYLATAPP 392
G +P+ S H PTPPP P +Y A APP
Sbjct: 1238 GAKPEASSHAPTPPPQPHP-----SYQAPAPP 1264
>AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (grd
related) protein18 protein.
Length = 445
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 246 YPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENN 407
Y ++ I SY N+ QP S+L PP + + + T PP P++N
Sbjct: 64 YYTQPPSVIYPSY-QNQQPLQPSSSYLANIPPFMQSYPQPPLF-TTPPPLPQDN 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,689,217
Number of Sequences: 27780
Number of extensions: 310069
Number of successful extensions: 1353
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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