Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0029
(590 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 199 5e-50
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 181 1e-44
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 177 1e-43
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 176 4e-43
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 175 8e-43
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 169 4e-41
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 165 9e-40
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 161 1e-38
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 156 4e-37
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 154 1e-36
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 152 7e-36
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 148 1e-34
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 147 1e-34
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 144 1e-33
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 144 2e-33
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 144 2e-33
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 141 1e-32
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 136 3e-31
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 136 5e-31
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 136 5e-31
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 132 6e-30
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 130 2e-29
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 129 4e-29
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 124 1e-27
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 122 5e-27
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 122 6e-27
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 121 1e-26
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 121 1e-26
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 118 8e-26
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 118 1e-25
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 117 2e-25
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 116 3e-25
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 114 1e-24
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 112 7e-24
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 111 9e-24
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 110 2e-23
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 108 1e-22
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 107 1e-22
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 107 2e-22
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 105 8e-22
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 104 1e-21
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 101 1e-20
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 100 2e-20
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 100 3e-20
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 100 3e-20
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 99 9e-20
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 99 9e-20
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 98 2e-19
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 95 8e-19
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 94 3e-18
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 93 3e-18
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 93 4e-18
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 93 4e-18
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 92 1e-17
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 89 9e-17
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 88 2e-16
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 84 2e-15
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 84 2e-15
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 84 3e-15
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 82 8e-15
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 80 3e-14
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 77 4e-13
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 75 2e-12
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 72 1e-11
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 71 3e-11
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 70 4e-11
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 70 4e-11
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 69 6e-11
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 68 1e-10
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 65 1e-09
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 64 2e-09
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 63 4e-09
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 61 2e-08
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 60 4e-08
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 60 5e-08
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 59 9e-08
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 58 1e-07
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 58 2e-07
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 58 2e-07
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 58 2e-07
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 57 4e-07
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 56 5e-07
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 56 8e-07
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 55 1e-06
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 54 2e-06
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 54 2e-06
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 54 2e-06
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 53 4e-06
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 53 6e-06
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 52 8e-06
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 51 2e-05
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 51 2e-05
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 50 4e-05
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re... 50 4e-05
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 50 5e-05
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples... 48 2e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 47 3e-04
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 46 5e-04
UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1; Plan... 45 0.001
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 45 0.002
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 44 0.002
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 44 0.002
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 44 0.004
UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep: C... 42 0.011
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 42 0.011
UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter violace... 42 0.014
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.025
UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7; Desulfuromonadale... 41 0.025
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 39 0.076
UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep: Cy... 39 0.076
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re... 39 0.10
UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep: C... 39 0.10
UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla crist... 38 0.18
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 38 0.23
UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep: Cyt... 36 0.94
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul... 34 2.2
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 2.9
UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus tetradac... 34 2.9
UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3; ... 34 2.9
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 33 3.8
UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep... 33 5.0
UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;... 33 6.6
UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1... 33 6.6
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 6.6
UniRef50_Q7M2C0 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 32 8.7
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 199 bits (485), Expect = 5e-50
Identities = 100/170 (58%), Positives = 114/170 (67%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCLIIQI+TGLFL ++YTA+I +AFY VN+ICR+VNYG ++RTLHANGASFFFICIYLH+
Sbjct: 40 LCLIIQILTGLFLAMHYTADINLAFYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHV 99
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRGIYY S+ L YVLP GQ+SFW ATVITNLL AIPYLG
Sbjct: 100 GRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPWGQMSFWVATVITNLLYAIPYLGM 159
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
LV + GGFAVDNATLTRF+T QTGSNNP
Sbjct: 160 DLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNP 209
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 181 bits (441), Expect = 1e-44
Identities = 88/141 (62%), Positives = 103/141 (73%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCL +QI+TGLFL ++YT++I AF V +ICR+VNYG IIR LHANGASFFFICIYLHI
Sbjct: 35 LCLAVQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWIIRNLHANGASFFFICIYLHI 94
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRG+YY S+ K YVLP GQ+SFWGATVITNLLSA+PY+G
Sbjct: 95 GRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGN 154
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
LV I GGF+VDNATLTRF+
Sbjct: 155 ALVQWIWGGFSVDNATLTRFF 175
Score = 181 bits (441), Expect = 1e-44
Identities = 88/141 (62%), Positives = 103/141 (73%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCL +QI+TGLFL ++YT++I AF V +ICR+VNYG IIR LHANGASFFFICIYLHI
Sbjct: 222 LCLAVQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWIIRNLHANGASFFFICIYLHI 281
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRG+YY S+ K YVLP GQ+SFWGATVITNLLSA+PY+G
Sbjct: 282 GRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGN 341
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
LV I GGF+VDNATLTRF+
Sbjct: 342 ALVQWIWGGFSVDNATLTRFF 362
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 177 bits (432), Expect = 1e-43
Identities = 88/170 (51%), Positives = 108/170 (63%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+CLI+QI+TGLFL ++YT++ AF V +ICR+VNYG IIR +HANGAS FFIC+++HI
Sbjct: 39 ICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHI 98
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRG+YY S+ YVLP GQ+SFWGATVITNLLSAIPY+GT
Sbjct: 99 GRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGT 158
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
LV I GGF+VD ATLTRF+ +TGSNNP
Sbjct: 159 SLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNP 208
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 176 bits (428), Expect = 4e-43
Identities = 88/170 (51%), Positives = 108/170 (63%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+CLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR LHANGAS FFIC++LH+
Sbjct: 39 ICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHV 98
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRG+YY S+ YVLP GQ+SFWGATVITNLLSAIPY+G+
Sbjct: 99 GRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGS 158
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
LV I GGF+VD ATLTRF+ +TGSNNP
Sbjct: 159 DLVQWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNP 208
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 175 bits (425), Expect = 8e-43
Identities = 84/141 (59%), Positives = 102/141 (72%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCLI QI+TGLFL ++YT++I AF V +ICR+VNYG +IR+LHANGASFFFIC+Y+HI
Sbjct: 39 LCLITQILTGLFLAMHYTSDISTAFSSVTHICRDVNYGWLIRSLHANGASFFFICLYMHI 98
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
RG+YY S+ K YVLP GQ+SFWGATVITNLLSA+PY+G
Sbjct: 99 ARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGD 158
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
LV I GGF+VD ATLTRF+
Sbjct: 159 TLVQWIWGGFSVDXATLTRFF 179
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 169 bits (411), Expect = 4e-41
Identities = 87/169 (51%), Positives = 105/169 (62%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
CLI+QI TGLFL ++Y+ + AF + +I R+VNYG IIR LHANGAS FFIC++LHIG
Sbjct: 40 CLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIG 99
Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
RG+YY SF YVLP GQ+SFWGATVITNLLSAIPY+GT
Sbjct: 100 RGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTD 159
Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
LV I GG++VD+ TLTRF+T +TGSNNP
Sbjct: 160 LVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNP 208
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 165 bits (400), Expect = 9e-40
Identities = 79/137 (57%), Positives = 95/137 (69%)
Frame = +3
Query: 96 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 275
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS FF CIYLHIGRG+Y
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFCIYLHIGRGLY 60
Query: 276 YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN* 455
Y S LK YVLP GQ+SFWGATVITNL SA+PY+G LV+
Sbjct: 61 YGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITNLSSALPYIGPTLVHW 120
Query: 456 I*GGFAVDNATLTRFYT 506
GGFA+DNATLTRF+T
Sbjct: 121 TWGGFAIDNATLTRFFT 137
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 161 bits (390), Expect = 1e-38
Identities = 81/169 (47%), Positives = 106/169 (62%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN ASFFFI +Y+HI
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFFFIFLYIHIA 96
Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
RG+Y+ SF LK + YVLP GQ+SFWGATVITNLLSAIPY+GT
Sbjct: 97 RGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGTS 156
Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
+ I GGF+VDN TLTRF+T +TGS+NP
Sbjct: 157 ITQWIWGGFSVDNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGSSNP 205
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 156 bits (378), Expect = 4e-37
Identities = 77/170 (45%), Positives = 101/170 (59%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHANGAS FF+ IYLHI
Sbjct: 50 MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRG+YY SF++K L YVLP GQ+SFWGATVITNL A+PY+G+
Sbjct: 110 GRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNLFGAVPYVGS 169
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
L+ + GG V +ATL RF+ +TGS+NP
Sbjct: 170 TLMEWVWGGHCVGDATLKRFFVLHFVSPFIIAALVALHLFFLHETGSSNP 219
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 154 bits (374), Expect = 1e-36
Identities = 79/170 (46%), Positives = 104/170 (61%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS FF C+Y HI
Sbjct: 43 LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFFCMYAHI 102
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRG+YY + + V L YVLP GQ+SFWGATVITNLL+AIP +G+
Sbjct: 103 GRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNLLTAIPMVGS 162
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
LV + GGF+V TLTRFY+ GS+NP
Sbjct: 163 PLVKWVWGGFSVSGVTLTRFYSLHFILPFVLSMLVLGHVILLHDKGSSNP 212
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 152 bits (368), Expect = 7e-36
Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HANGAS FFI +YLHI
Sbjct: 44 ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG+YY S++ ++V YVLP GQ+SFWGATVIT+L SAIP +
Sbjct: 104 FRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVV 163
Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
G +V + GGF+VDNATL RF++ Q GSNNP
Sbjct: 164 GDTIVTWLWGGFSVDNATLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNP 215
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 148 bits (358), Expect = 1e-34
Identities = 77/169 (45%), Positives = 98/169 (57%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA GAS FFICIY+HI
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91
Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
RG+YY + K V L YVLP GQ+SFW ATVITNLL+AIPYLG
Sbjct: 92 RGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGVA 151
Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
+ + GGF++++ TLTRF GSNNP
Sbjct: 152 VTTWLWGGFSINDPTLTRFCALHFILPFIIISLSSIHIILLHNEGSNNP 200
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 147 bits (357), Expect = 1e-34
Identities = 81/170 (47%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
L+I II+GL L ++YT N +AF V +I R+VN G ++R +HANGASFFFI +YLHIGR
Sbjct: 40 LVILIISGLTLAMHYTPNTLLAFSSVEHIMRDVNNGWLLRYIHANGASFFFIWVYLHIGR 99
Query: 267 GIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+YY S+ L YVLP GQ+SFWGATVITNLLSAIP++GT
Sbjct: 100 NLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVITNLLSAIPWIGT 159
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
V + GGF+VDNATL RF++ Q GSNNP
Sbjct: 160 DFVLFVWGGFSVDNATLNRFFSLHYLLPFILAALVVMHLLALHQDGSNNP 209
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 144 bits (349), Expect = 1e-33
Identities = 74/170 (43%), Positives = 99/170 (58%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCL+IQ+++GL L+ +YTA+ ++AF V +I RNV G ++R +HANG+S FFICIY HI
Sbjct: 54 LCLVIQLLSGLLLSAHYTAHEDMAFDSVVHIMRNVEKGWMLRNIHANGSSMFFICIYAHI 113
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
RG+YY S+ K V Y LP GQ+S+WGATVITN+LS P +G
Sbjct: 114 ARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMSYWGATVITNMLSVSPVVGE 173
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
++ + GG+ V NATL RFYT + GSNNP
Sbjct: 174 SMLRYVWGGWTVCNATLKRFYTLHFLLPFVMVAVVFLHLFFLHEKGSNNP 223
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 144 bits (348), Expect = 2e-33
Identities = 70/142 (49%), Positives = 90/142 (63%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHANGAS FF+C+YLHI
Sbjct: 46 LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
R IY+ ++ K YVLP GQ+SFW ATVITNL SAIPY+G
Sbjct: 106 SRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSFWAATVITNLFSAIPYIGN 165
Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
+V I G F++ NATL RFY+
Sbjct: 166 TIVLWIWGSFSISNATLNRFYS 187
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 144 bits (348), Expect = 2e-33
Identities = 75/173 (43%), Positives = 100/173 (57%), Gaps = 2/173 (1%)
Frame = +3
Query: 78 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS FFI +YLH
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
I RG+YY S+ + + YVLP GQ+SFWGATVIT L AIP
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPG 171
Query: 432 LGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
+G + + GG AVDNATL RF++ TG+NNP
Sbjct: 172 IGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNP 224
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 141 bits (342), Expect = 1e-32
Identities = 74/170 (43%), Positives = 97/170 (57%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H NGAS FF +Y+HI
Sbjct: 37 LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFFFMYIHI 96
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRGIYY + V YVLP GQ+S+W + VIT+LLS IPY+G
Sbjct: 97 GRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASVVITSLLSTIPYIGP 156
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
LV I GGF+V ATLTRFY+ +TGS+NP
Sbjct: 157 SLVEWIWGGFSVGQATLTRFYSLHFILPFVMVIVVIIHVGLLHETGSSNP 206
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 136 bits (330), Expect = 3e-31
Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
Frame = +3
Query: 78 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS FF+ +Y+H
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
I RG+YY S+ + + YVLP GQ+SFWGATVIT L AIP
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPG 171
Query: 432 LGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
+G + + GG AVDN TL RF++ TG+NNP
Sbjct: 172 VGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVVVHIWAFHTTGNNNP 224
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 136 bits (328), Expect = 5e-31
Identities = 66/143 (46%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97
Query: 261 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
+G+YY S+ V L Y GQ+S WGATVITNL SAIP++
Sbjct: 98 AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157
Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
G +V+ + GGF+V N T+ RF+
Sbjct: 158 GNDIVSWLWGGFSVSNPTIQRFF 180
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 136 bits (328), Expect = 5e-31
Identities = 69/144 (47%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ +II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS FFI +Y+H+
Sbjct: 50 IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHM 109
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG+YY S+ + + YVLP GQ+SFWGATVITNL SAIP +
Sbjct: 110 FRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVV 169
Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
G +V + GGF+VDN TL RF++
Sbjct: 170 GDDIVTLLWGGFSVDNPTLNRFFS 193
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 132 bits (319), Expect = 6e-30
Identities = 66/128 (51%), Positives = 83/128 (64%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA GAS FFICIY HI
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLFFICIYTHIA 91
Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
RG+YY S+ K V L YVLP GQ+SFW ATVITNLL+AIPYLGT
Sbjct: 92 RGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTT 151
Query: 444 LVN*I*GG 467
+ + GG
Sbjct: 152 MTXWLWGG 159
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 130 bits (314), Expect = 2e-29
Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 2/168 (1%)
Frame = +3
Query: 93 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS FF +Y+H+ RG+
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFAVYVHMLRGL 115
Query: 273 YYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
YY S+ + + + YVLP GQ+SFWGATVITNL SAIPY G +
Sbjct: 116 YYGSYKEPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYFGESI 175
Query: 447 VN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
V + GG++V N TL RF++ G NNP
Sbjct: 176 VTLLWGGYSVGNPTLNRFFSLHYLLPFLIAGVVVLHVWALHVAGQNNP 223
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 129 bits (312), Expect = 4e-29
Identities = 66/142 (46%), Positives = 89/142 (62%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGASFFF +YLHI
Sbjct: 44 VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFFWVYLHI 103
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
GRG+Y + L V + YV P GQI GATVIT+LLSAIPY+G
Sbjct: 104 GRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITSLLSAIPYMGG 163
Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
LV + GGF V TL RF++
Sbjct: 164 FLVKWVWGGFFVKGPTLHRFFS 185
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 124 bits (300), Expect = 1e-27
Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97
Query: 261 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
+G+YY S+ V L Y GQ+S WGATVITNL SAIP++
Sbjct: 98 AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157
Query: 435 GTILVN*I*GGFAVDN 482
G +V+ + GGF +++
Sbjct: 158 GNDIVSWLWGGFNMED 173
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 122 bits (295), Expect = 5e-27
Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS FF+ ++LH+
Sbjct: 38 LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
R +YY S + + + + YVLP GQ+SFWGATVIT+L+SA+P +
Sbjct: 98 FRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVITSLVSAVPIV 157
Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
GT LV + GGF+V N TL RF++
Sbjct: 158 GTDLVYYLWGGFSVSNPTLNRFFS 181
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 122 bits (294), Expect = 6e-27
Identities = 63/169 (37%), Positives = 93/169 (55%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N A+F CIY+HIG
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFMLGCIYVHIG 100
Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
RG+YY SF L V YVLP GQ+++W A VI+++++AIP +G
Sbjct: 101 RGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQVISSMVTAIPKVGGE 160
Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
+ + GG+AV N TL R ++ +GS NP
Sbjct: 161 VAMWVWGGYAVGNITLKRLFSVHFLLPFVILAVVLLHLLFLHSSGSGNP 209
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 121 bits (292), Expect = 1e-26
Identities = 62/125 (49%), Positives = 74/125 (59%)
Frame = +3
Query: 216 ANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 395
ANGASFFFIC+Y+HIGRGI+Y S+ + + YVLP GQ+SFWGA
Sbjct: 1 ANGASFFFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGA 60
Query: 396 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 575
TVITNL SAIP++GT LV I GGF+V NATLTRF+T Q
Sbjct: 61 TVITNLFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQA 120
Query: 576 GSNNP 590
G+NNP
Sbjct: 121 GANNP 125
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 121 bits (291), Expect = 1e-26
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Frame = +3
Query: 78 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
ALCL IQI+TG+ L ++YT ++ AF V +I R+VN G ++R LH+N AS FF +YLH
Sbjct: 37 ALCLGIQIVTGVTLAMHYTPSVSEAFNSVEHIMRDVNNGWLVRYLHSNTASAFFFLVYLH 96
Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
IGRG+YY S+ YVLP GQ+S WGATVITNL+SAIP+
Sbjct: 97 IGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGATVITNLMSAIPW 156
Query: 432 LGTILVN*I*GGFAVD 479
+G +V I GG D
Sbjct: 157 IGQDIVEFIWGGLYTD 172
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 118 bits (285), Expect = 8e-26
Identities = 63/141 (44%), Positives = 80/141 (56%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS FFI +YLHI
Sbjct: 36 MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+G+++ S+ LK V + YVL Q+SFW A VIT+LLS IP G
Sbjct: 96 FKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGP 155
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
+V I GF V ATL F+
Sbjct: 156 TIVTWIWSGFGVTGATLKFFF 176
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 118 bits (283), Expect = 1e-25
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS FF+ +YLH+
Sbjct: 60 LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHM 119
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG+ Y S+ + V + Y+LP GQ+S+WGA VI NL SAIP++
Sbjct: 120 FRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPFI 179
Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
G L I G + V +ATL RF++
Sbjct: 180 GPDLALLIRGDYVVSDATLNRFFS 203
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 117 bits (281), Expect = 2e-25
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GAS FF +Y H+G
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFFFMYCHVG 101
Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
RG+YY S+ YVLP GQ+SFWGATVI+N L+ IP+ G
Sbjct: 102 RGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNFLTVIPFFGDT 161
Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
L+ + GG++V + TL+RF+ + G++NP
Sbjct: 162 LLKYVLGGYSVCDLTLSRFFVAHFLAPFLISLMVLFHLIWGHEKGASNP 210
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 116 bits (280), Expect = 3e-25
Identities = 61/130 (46%), Positives = 82/130 (63%)
Frame = +3
Query: 78 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
A+CLIIQI+TG+ L ++Y ++ AF + +I R+VN G +IR LH+N AS FF +YLH
Sbjct: 37 AVCLIIQIVTGVTLAMHYNPSVAEAFNSIEHIMRDVNNGWLIRYLHSNTASAFFFLVYLH 96
Query: 258 IGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
IGRG+YY S+ YVLP GQ+S WGATVITNL+SAIP++G
Sbjct: 97 IGRGLYYASYR------------APRTLAWVSLYVLPYGQMSLWGATVITNLISAIPWIG 144
Query: 438 TILVN*I*GG 467
+V + GG
Sbjct: 145 QDIVEFVWGG 154
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 114 bits (275), Expect = 1e-24
Identities = 63/142 (44%), Positives = 84/142 (59%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS FF+ IYLHI
Sbjct: 30 IMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+G+ S+ L V + YVL GQ+S+W A VIT+L++++PYLG
Sbjct: 88 FKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITSLMTSVPYLGK 147
Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
+V I G F+V TL FY+
Sbjct: 148 YMVWWIWGSFSVCENTLKFFYS 169
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 112 bits (269), Expect = 7e-24
Identities = 62/172 (36%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS FFI IYLH+
Sbjct: 47 LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYLHM 106
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG+ S+ + + + Y+LP GQ+S+WGA VI NL +A+P +
Sbjct: 107 FRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAVPVV 166
Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
G L + G F + +ATL RF+ GSNNP
Sbjct: 167 GEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLAGLVFLHIVALHHVGSNNP 218
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 111 bits (268), Expect = 9e-24
Identities = 66/172 (38%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Frame = +3
Query: 78 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
+L + IQIITGLFLT YY N E F + I YG ++ +H N +S F IYLH
Sbjct: 33 SLIMSIQIITGLFLTFYYE-NSENCFDSIYIIHIETFYGVLVHFIHLNVSSIIFFLIYLH 91
Query: 258 IGRGIYYESFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
+ +G+ + SF++ K + YVLP GQ+S WGATVITNLLSAIP +
Sbjct: 92 MTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGATVITNLLSAIPVI 151
Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
G ++V I GG+ V N T+ F++ GSNNP
Sbjct: 152 GKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIILIFIMIHLIILHYYGSNNP 203
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 110 bits (265), Expect = 2e-23
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCLI QI+TGLFL ++YT++I AF V +ICR+VNYG +IR +HANGASFFFICIY HI
Sbjct: 39 LCLIAQILTGLFLAMHYTSDISTAFSSVTHICRDVNYGWLIRNMHANGASFFFICIYFHI 98
Query: 261 GRGIYYESFNLK 296
GRG+YY S+ K
Sbjct: 99 GRGLYYGSYLYK 110
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 108 bits (259), Expect = 1e-22
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HANGAS FFIC++LH+
Sbjct: 20 LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Query: 261 GRGIYYESFNL 293
GRG+YY S+N+
Sbjct: 80 GRGVYYGSYNM 90
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 107 bits (258), Expect = 1e-22
Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GASF F+ ++LH+
Sbjct: 46 VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105
Query: 261 GRGIYYES-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
GR ++Y S F YVLP GQ+SFWGATVITNLLS P
Sbjct: 106 GRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATVITNLLSPFP--- 162
Query: 438 TILVN*I*GGFAVDNATLTRFY 503
L+ + GG+ V + TL RF+
Sbjct: 163 -SLIEWVSGGYCVHSPTLKRFF 183
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 107 bits (257), Expect = 2e-22
Identities = 58/170 (34%), Positives = 87/170 (51%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ + IQI+TGL L +Y++ + AF + + R V +G ++R +H NGASF F+ +Y H+
Sbjct: 36 MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGASFIFMTMYAHM 95
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+G+ Y SF L L YV+P G +SFW ATVIT+ +SAIP LG
Sbjct: 96 FKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAATVITSFMSAIPILGE 155
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
++ I GG+++ TL F+T GS+NP
Sbjct: 156 SILYWIWGGYSITGRTLQFFFTLHYLLPFVISAIAMIHLLLLHSKGSSNP 205
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 105 bits (252), Expect = 8e-22
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS FF Y H+
Sbjct: 40 LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLFFALTYAHV 99
Query: 261 GRGIYYESF-NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
RG++Y ++ +V YVLP G +S+WG TVITN+++ +P G
Sbjct: 100 ARGVFYGAYLKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVITNMMTVVPG-G 158
Query: 438 TILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
++ GGF + + TL R + Q GS+NP
Sbjct: 159 ARALDWFQGGFVISSLTLKRVFVLHFILPFVILGLALVHVLILHQNGSSNP 209
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 104 bits (250), Expect = 1e-21
Identities = 58/141 (41%), Positives = 78/141 (55%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ IQIITG+FL YT ++ A+Y + +I R + G R +HA GAS F+ YLHI
Sbjct: 34 IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
RG+ Y L + YVLP GQ+S+WGATVITNLLS+IP
Sbjct: 94 LRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLLSSIP---- 149
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
+ V I GG+ V + T+ RF+
Sbjct: 150 VAVIWICGGYTVSDPTIKRFF 170
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 101 bits (243), Expect = 1e-20
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+CL++QIITGLFL ++YTA+ AF + +ICR+VNYG +IR HANGAS FFIC+Y+HI
Sbjct: 39 VCLLLQIITGLFLAMHYTADTTSAFSSIAHICRDVNYGWVIRYTHANGASMFFICLYIHI 98
Query: 261 GRGIYYESFNLK 296
RG+YY S+ K
Sbjct: 99 ARGLYYGSYLFK 110
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 100 bits (240), Expect = 2e-20
Identities = 43/69 (62%), Positives = 58/69 (84%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+CLIIQI+TG+FL ++YT ++++AF V +I R+VNYG +IR LHAN ASFFFI +YLHI
Sbjct: 38 VCLIIQILTGVFLAMHYTPSVDLAFISVEHIMRDVNYGWLIRYLHANTASFFFIFVYLHI 97
Query: 261 GRGIYYESF 287
GRG+YY S+
Sbjct: 98 GRGLYYGSY 106
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 100 bits (239), Expect = 3e-20
Identities = 60/172 (34%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS FF +Y+H+
Sbjct: 54 IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLFFAALYIHM 113
Query: 261 GRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG+YY S+ + V L Y L GQ+S+W A VIT L S +P++
Sbjct: 114 FRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVITGLFSVVPFV 173
Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
G + + GGFA + AT+ RF+ + GS NP
Sbjct: 174 GEKIRIWVLGGFAPNAATVNRFFVLHFTLPFVILAVVGLHVWALHRQGSGNP 225
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 100 bits (239), Expect = 3e-20
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Frame = +3
Query: 93 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS F+ IY+H+ G
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAASVVFLVIYIHMFTG 112
Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
IYY S+ + + + Y+LP GQ+S+W A VITNL IP++G
Sbjct: 113 IYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQVITNLFGGIPFIGDD 172
Query: 444 LVN*I*GGFAVDNATLTRFY 503
LV I G F V + TLTRF+
Sbjct: 173 LVVWIRGNFYVSDPTLTRFF 192
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 98.7 bits (235), Expect = 9e-20
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS FFI +YLH+
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLFFIGVYLHMF 113
Query: 264 RGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
RG+ Y S + V + YVLP GQ+SFWGA VI +L AIP +G
Sbjct: 114 RGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVIISLFGAIPVIG 173
Query: 438 TILVN*I*GGFAVDNATLTRFY 503
L I G + + TL RF+
Sbjct: 174 NGLDEWIMGDYLPSDVTLNRFF 195
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 98.7 bits (235), Expect = 9e-20
Identities = 59/166 (35%), Positives = 83/166 (50%)
Frame = +3
Query: 93 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
IQII+GL L+ +Y ++ F + I ++V G IR +H++G S F +YLHI RG+
Sbjct: 39 IQIISGLILSWFYFIDLSGGFKSLILIMQDVWGGWFIRFIHSSGVSLFMFIMYLHILRGL 98
Query: 273 YYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN 452
Y SF V YVLP G +S+WG TV+TN+LSAIP +G LV
Sbjct: 99 IYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTNMLSAIPMVGVYLVE 158
Query: 453 *I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
I GG + +TL RF++ + GS+NP
Sbjct: 159 TIWGGSSAGVSTLVRFFSFHYLLSLFIMVFILIHLILLHECGSSNP 204
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 97.9 bits (233), Expect = 2e-19
Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
+ I +GLFL I YT +I AF V I R V G IR+LH G + F C+Y+HIGR
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVTMLFACLYIHIGR 112
Query: 267 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
++Y S+ + + L YVLP GQ+S+WGATVI N + AIP +G
Sbjct: 113 SLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVILNAVHAIPLIGQ 172
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
L + GG + N L R +
Sbjct: 173 PLSELLLGGDTLGNVALHRLF 193
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 95.5 bits (227), Expect = 8e-19
Identities = 56/141 (39%), Positives = 79/141 (56%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ + IQ+ +GL L Y++ +A+ V I R V G ++R++H+N ASF F +++H
Sbjct: 33 ILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFFLMFMHF 91
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
RGI SF L + YVLP GQ+SFWGATVI NLLS +PY G
Sbjct: 92 FRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPWGQMSFWGATVIINLLSILPY-GK 150
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
+LV + GGF V AT + F+
Sbjct: 151 MLVVWLWGGFYVSAATCSFFF 171
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 93.9 bits (223), Expect = 3e-18
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +3
Query: 93 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
+QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS FF YLHI R +
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFACYLHIFRAM 100
Query: 273 YYESFNLKY--V*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
YY + Y + + Y L GQ S+W ATVIT AIP++G L
Sbjct: 101 YYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAATVITGFTRAIPWVGDTL 160
Query: 447 VN*I*GGFAVDNATLTRFY 503
+ + GG+A TL RFY
Sbjct: 161 YSFLVGGYAPGTPTLGRFY 179
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 93.5 bits (222), Expect = 3e-18
Identities = 50/118 (42%), Positives = 63/118 (53%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ IQI+TG+FL Y+ I A+Y + +I R + G R +HA GAS F YLHI
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHI 259
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG+ Y L + YVLP GQ+S+WGATVITNLLS IP L
Sbjct: 260 LRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSGIPAL 317
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 93.1 bits (221), Expect = 4e-18
Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 20/89 (22%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYR--------------------VNYICRNVNYG*I 200
LCLI QIITGLFL ++YTA+ +AF V +ICR+VNYG +
Sbjct: 3 LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWL 62
Query: 201 IRTLHANGASFFFICIYLHIGRGIYYESF 287
+R LHANGASFFFICIYLHIGRG+YY SF
Sbjct: 63 LRNLHANGASFFFICIYLHIGRGMYYGSF 91
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 93.1 bits (221), Expect = 4e-18
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97
Query: 261 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWG 392
+G+YY S+ V L Y GQ+S WG
Sbjct: 98 AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWG 143
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 91.9 bits (218), Expect = 1e-17
Identities = 44/78 (56%), Positives = 53/78 (67%)
Frame = +3
Query: 357 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 536
YVLP GQ+SFWGATVITNL+SA+PY+GT++V + GGFAVDNATLTRF++
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIA 192
Query: 537 XXXXXXXXXXXQTGSNNP 590
QTGSNNP
Sbjct: 193 AMVILHLLFLHQTGSNNP 210
Score = 36.7 bits (81), Expect = 0.41
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +2
Query: 29 T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 208
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 209 ITC*WSFIFFYLHLFTYRTRNL 274
ITC YL + + + N+
Sbjct: 84 ITCKRGINLLYLFMSSRWSSNM 105
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 88.6 bits (210), Expect = 9e-17
Identities = 54/170 (31%), Positives = 79/170 (46%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ LI+QI++GL LT +Y E AF ++ + +G +R H+ G SF+F +++HI
Sbjct: 29 ILLILQILSGLLLTFFYVPCKEGAFESLSRLVTETQFGWFVRLYHSVGVSFYFFFMFIHI 88
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+G++Y S + + YVLP GQ+SFWGATVI+NLL
Sbjct: 89 IKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATVISNLLEWFGKAKV 148
Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
I GGF V TL RF+ + GS+NP
Sbjct: 149 ITF----GGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLHREGSSNP 194
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/78 (56%), Positives = 50/78 (64%)
Frame = +3
Query: 357 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 536
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 537 XXXXXXXXXXXQTGSNNP 590
+TGSNNP
Sbjct: 192 GATVLHLLFLHETGSNNP 209
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 84.2 bits (199), Expect = 2e-15
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = +3
Query: 78 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
A CLIIQI+TG+ L ++Y+ N+ AF + +I R+VN G ++R LH+N AS FF +YLH
Sbjct: 37 ACCLIIQIVTGVTLAMHYSPNVLEAFNSIEHIMRDVNNGWLVRYLHSNTASAFFFLVYLH 96
Query: 258 IGRGIYYESF 287
IGRG+YY S+
Sbjct: 97 IGRGMYYGSY 106
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 84.2 bits (199), Expect = 2e-15
Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ IQI+ G+ L + + A+Y V +I R + G R +HA GASF FI YLHI
Sbjct: 34 IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93
Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL-G 437
RG+ Y L + YVLP GQ+SFW TVITNLL YL
Sbjct: 94 LRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTVITNLL----YLFR 149
Query: 438 TILVN*I*GGFAVDNATLTRFY 503
T ++ GG+ V + TL RF+
Sbjct: 150 TCFMD--CGGYLVSDPTLKRFF 169
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 83.8 bits (198), Expect = 3e-15
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L +++Q+I+G FL +Y + AF V I + +G +IR +H +G S FI +Y H+
Sbjct: 43 LMIVLQLISGFFLMAHYVPTSQDAFASVQGIMYDTKWGWLIRYMHVDGVSLIFILLYTHM 102
Query: 261 GRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG+ Y S + V + YVLP G +S+W VIT+++ A+P +
Sbjct: 103 FRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWAGEVITSIMHALPVV 162
Query: 435 GTILVN*I*GGFAVDNATLTR 497
G L GG + +ATL R
Sbjct: 163 GPSLTTLTRGGPGIGSATLQR 183
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 82.2 bits (194), Expect = 8e-15
Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HANGAS F I ++L I
Sbjct: 30 ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLXI 89
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
RG ++ ++V GQ+SFWG + AI +
Sbjct: 90 FRGXXXXXYSSXXEFVRCXGVVXXXXMIVXAXXGXXPXXGQMSFWGXXXXXSXXXAIXXV 149
Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
G V GF+VD TL + Q GSNNP
Sbjct: 150 GDTXVTXXXXGFSVDXXTLNXXXSLHHXLPLILVGASLLHLAALHQYGSNNP 201
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 80.2 bits (189), Expect = 3e-14
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
C ++Q+ TG +T YY + AF V YI N+G +IR++H AS + + LH+
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVF 102
Query: 264 RGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
R F + + Y LP QI +W ++T + AIP +G
Sbjct: 103 RVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIG 162
Query: 438 TILVN*I*GGFAVDNATLTRFYT 506
+ LV + G +V +TLTRFY+
Sbjct: 163 SPLVELLRGSASVGQSTLTRFYS 185
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 76.6 bits (180), Expect = 4e-13
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 93 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
IQ++TG+ L IYY + + AF V I +V +G +IR HA G++ + LH+ +
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSNMMVAVLLLHMLSVL 109
Query: 273 YYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
+ S+ + L Y+LP Q+SFW TV TN AIP +G L
Sbjct: 110 FMGSYKRPRELNWLTGFILFNLVLGISLTGYLLPWSQLSFWATTVATNSAGAIPVIGGYL 169
Query: 447 VN*I*GGFAVDNATLTRFY 503
V + GG V TL RF+
Sbjct: 170 VEFLRGGKLVGPPTLGRFF 188
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 74.5 bits (175), Expect = 2e-12
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
+IIQ+ +G+ L+++Y + + + N+ Y IIR +H S F +Y+HIGR
Sbjct: 32 MIIQVFSGIVLSLFYDVLGNFSMLMM-WTDDNI-YCWIIRYIHIWCVSIIFFLVYVHIGR 89
Query: 267 GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
+YY S+ + V Y+LP Q+S+W ATV+T+++ ++P +G ++
Sbjct: 90 SLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVLTSIILSVPVVGGLI 149
Query: 447 VN*I*GGFAVDNA-TLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
+ + GGF+V TL R + Q+GS +P
Sbjct: 150 FSYVVGGFSVTLIDTLVRVFPVHISLGFILLGLIVLHLFYLHQSGSTSP 198
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 71.7 bits (168), Expect = 1e-11
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L ++Q +TGLFL +YY E AF V I V +G IR+LH A+ + ++LH+
Sbjct: 40 LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHM 99
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
R Y SF + L Y+LP Q+S+W + + ++P +
Sbjct: 100 LRVYYTGSFKKPRELNWLAGCFLLVLSLGLAFTGYLLPYEQLSYWASVIGAETAGSLPVV 159
Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
G + + GG V L+RFY
Sbjct: 160 GATMKIMMQGGIKVTAEMLSRFY 182
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/73 (49%), Positives = 42/73 (57%)
Frame = +3
Query: 372 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 551
GQ+ FWGATVITN LS IPY G +VN I GGF+V + TLTRFYT
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 552 XXXXXXQTGSNNP 590
+TGS+NP
Sbjct: 65 HLVFLHRTGSSNP 77
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 70.1 bits (164), Expect = 4e-11
Identities = 34/61 (55%), Positives = 37/61 (60%)
Frame = +3
Query: 210 LHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFW 389
LHANGASFFFICIYLHIGRG+YY S+ K YVLP GQ+SFW
Sbjct: 48 LHANGASFFFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFW 107
Query: 390 G 392
G
Sbjct: 108 G 108
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/75 (49%), Positives = 44/75 (58%)
Frame = +3
Query: 366 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 545
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +ATL RFYT
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 546 XXXXXXXXQTGSNNP 590
QTGS NP
Sbjct: 62 LIHLVFLHQTGSTNP 76
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 69.3 bits (162), Expect = 6e-11
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS FFI +YLH+
Sbjct: 38 MMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHV 97
Query: 261 GRGIYYES 284
RG+YY S
Sbjct: 98 LRGMYYGS 105
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 68.1 bits (159), Expect = 1e-10
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N SFFF+ ++LHI +
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHILKA 97
Query: 270 IYYESFNLKYV 302
+++ S+ LK V
Sbjct: 98 LFFFSYRLKMV 108
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 64.9 bits (151), Expect = 1e-09
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = -2
Query: 244 QIKKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDP 65
Q+KKN+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P
Sbjct: 1 QMKKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEP 60
Query: 64 IFHQEEILDGLGKSINELLMI 2
FH E+L+G GKS + L I
Sbjct: 61 KFHHTEMLEGAGKSTSASLSI 81
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
+++ ITGL L IYY+ + A+ + I +V G ++R +H GA F + LH+ R
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVILHMLRT 145
Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
+ S+ +++ Y+LP Q++FW T+ +++ A P +G
Sbjct: 146 YFTASYKAPRQFIWFTGMILLFMTLLLSFSGYLLPWDQLAFWAVTIGSSMADAAPGVGPA 205
Query: 444 LVN*I*GGFAVDNATLTRFY 503
+ + GG + L RFY
Sbjct: 206 IGRLLRGGAEIGAGALLRFY 225
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 63.3 bits (147), Expect = 4e-09
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L ++Q++TG+ L +YY +E A+ V +I V G +R++H A+ I + LH
Sbjct: 42 LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVVLHF 101
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
R ++ ++ ++ + Y+LP Q+ +W A + T +L +IP +
Sbjct: 102 LRVVFTGAYKPPRQFNWVVGVLLLLLVILFCFTGYLLPLDQVGYWAAIIGTKILGSIPIV 161
Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
G L+ G + + TL RF+
Sbjct: 162 GDQLLLLGQAGTKITDHTLMRFF 184
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S FF+ + LH+
Sbjct: 35 IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHM 94
Query: 261 GRGIYYESFNLKYV 302
+ ++Y SF LK V
Sbjct: 95 LKALFYFSFRLKKV 108
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 60.1 bits (139), Expect = 4e-08
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L ++ +TG++L YY ++ A+ + + +V +G R LH A I ++LH+
Sbjct: 64 LMFLMLTVTGVWLMFYYVPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVWLHM 123
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
R Y S+ ++ + Y+LP Q+++W V +N+ P +
Sbjct: 124 TRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLLPWDQLAYWAIQVGSNMAKVTPVI 183
Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
GT + + G+ + ATL R+YT
Sbjct: 184 GTYVQRALLDGYDIGPATLVRWYT 207
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 59.7 bits (138), Expect = 5e-08
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASFFFICIYL 254
LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS + +
Sbjct: 50 LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMVVLVGA 109
Query: 255 HIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 428
H+ + + ++ + + L Y+LP + ++WG V TN++ +P
Sbjct: 110 HLLQVFLWGAYKRPREIMWLVGVILLALTMTAAFTGYLLPWDERAYWGTIVGTNMIGLVP 169
Query: 429 YLGTILVN*I*GGFAVDNATLTRFY 503
+G +L + I GG + TL+ F+
Sbjct: 170 VVGPLLKSAIRGGSGLGALTLSHFF 194
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 58.8 bits (136), Expect = 9e-08
Identities = 33/64 (51%), Positives = 35/64 (54%)
Frame = +3
Query: 399 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTG 578
VITNLLSAIPYLG L + GGFAVDNATLTRF+ QTG
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 579 SNNP 590
S NP
Sbjct: 61 SPNP 64
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 58.4 bits (135), Expect = 1e-07
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH A + + LH +
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLHHFMAQAMIVLLALHFLQV 104
Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
+ ++ ++ Y+LP Q +W V T L+ IP +G
Sbjct: 105 VIDGAYKAPREFNFWTGLILMKIVLGLSLTGYLLPWDQKGYWATKVATTLMGLIPAIGGD 164
Query: 444 LVN*I*GGFAVDNATLTRFY 503
L + GG +ATLTRF+
Sbjct: 165 LQKVVVGGTDYGHATLTRFF 184
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
+ +Q +TG+ L YY + A+ V YI +G +IR +H A+F I +H+ R
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLMAVIGMHMAR 115
Query: 267 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+ ++ + + Y+L Q FW + V + S P+LG
Sbjct: 116 TFFSGAYKAPREMNWIVGVILLLLVIGLAFTGYLLRWDQDGFWASVVGIKIGSYSPFLGP 175
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
+ + + GG V ATL+RF+
Sbjct: 176 YITHFLLGGDVVGPATLSRFF 196
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 58.0 bits (134), Expect = 2e-07
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +3
Query: 78 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
A L++ +++GL L + ++E A+ V I V +G IR++H A ++LH
Sbjct: 68 AALLLLLVVSGLPLLFLHVPSVERAYGSVKDIEYVVTFGSWIRSVHRIAAHLMVAAVFLH 127
Query: 258 IGR----GIYYESF----NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 413
+ R G Y + ++ + Y+LP Q+++W TV TN+
Sbjct: 128 LVRVFLTGAYKNGTGRGQHREWNWVLGVVMFLVTLFLSFTGYLLPWDQLAYWAVTVGTNI 187
Query: 414 LSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
SA+P +G + + GG +D TL RFY
Sbjct: 188 ASAVPLVGAEVRELLLGGRNIDQPTLIRFY 217
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 57.6 bits (133), Expect = 2e-07
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR- 266
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS + ++LH R
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVMMFLHTLRV 112
Query: 267 ---GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
G Y + L ++ Y+LP + + V + A P +G
Sbjct: 113 FFQGAYKKPRELNWI--VGVLIFFVMLGLGFTGYLLPWDMKALFATKVGLQIAEATPLIG 170
Query: 438 TILVN*I*GGFAVDNA-TLTRFY 503
T + + G + A TLTRF+
Sbjct: 171 TQVKTLLAGHPDIVGAQTLTRFF 193
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 56.8 bits (131), Expect = 4e-07
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +2
Query: 107 WIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL*IF 286
W +N L + + L + Y P+ KL L+ S WS +L T+R+R LL +
Sbjct: 5 WPTISNTLLTGHLLRLLLNCTYHPRRKLRLDYSLSPRQWSLYALHLPFPTHRSRPLLWLI 64
Query: 287 *LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN 439
+ + +Y Y ++N FH L +R NI LG N N+K I NP++RN
Sbjct: 65 SPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNSNHKPTISNPVYRN 115
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 56.8 bits (131), Expect = 4e-07
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVN------YG*IIRTLHANGASFFFICI 248
+ +Q++TG+F I Y + + VN ++R +H GAS FIC+
Sbjct: 47 MALQLVTGIFCAIEYLNLTKKHLFHVNVGVGEPGPIMDGLVSDLLRFMHLWGASLVFICL 106
Query: 249 YLHIGRGIYYESFNLKYV-*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAI 425
HIGRG+YY S++ V Y+LP Q+S+W VI+ + ++
Sbjct: 107 LGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGVVISTIFLSL 166
Query: 426 PYLGTILVN*I*GGFAVDNATLTRFY 503
P +G L + + G + + +R +
Sbjct: 167 PVIGPHLYSFLLGSYDFGDGIXSRVF 192
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +3
Query: 150 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 296
AF V YI VNYG I R H NGAS FF+ +YLHI +G++ S+ LK
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMSYRLK 50
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 55.6 bits (128), Expect = 8e-07
Identities = 39/112 (34%), Positives = 57/112 (50%)
Frame = +2
Query: 53 LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 232
+MK + + N ++ I +N L++ + NS L +LP+ KLWLN T
Sbjct: 1 MMKLWLSPRHLLNFTDSNRPIPSNTLYTXHNNSILLCNPHLPRRKLWLNYPIYTRKRGIN 60
Query: 233 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 388
FYL ++ RTR +L I L M + + I NS+ HRLC T+R NI L
Sbjct: 61 IFYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
++Q++TG+ L + Y + A+ + + +++ G IR LH G++F + +H+ +
Sbjct: 49 LLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWGSNFMIAVVLVHMAQV 108
Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
+ ++ + + V+ Q ++WG + +++S +P LG
Sbjct: 109 FLFGAYKYPRELTWILGVFLLLVTLAMGFTGQVMRFDQDAYWGLGIGASIVSRVPLLGPW 168
Query: 444 LVN*I*GGFAVDNATLTRFY 503
LV + GG + ATL+RF+
Sbjct: 169 LVTLVLGGPIIAGATLSRFF 188
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
I + TG L YY + +AF + Y+ +V +G ++R +H GA I + LH+ R
Sbjct: 82 ITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGAHLMVIMVELHMFRV 141
Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
S+ ++ + Y+LP Q+ FW TV TN+ A P LG
Sbjct: 142 FLTGSYKKPREFNWVVGVLLLVLTLLLSFTGYLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 54.4 bits (125), Expect = 2e-06
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
IIQI+TGL L YY AF +I V +G +IR +HA A+ + +++H+
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHMFST 177
Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
+ +S+ + + + Y+LP +++F+ V T + P G
Sbjct: 178 FFMKSYRKPRELLWVSGFILLVLTLGFGFTGYLLPWNELAFFATQVGTEVPKVAPG-GAF 236
Query: 444 LVN*I*GGFAVDNATLTRFYT 506
LV + GG V TLTR ++
Sbjct: 237 LVEILRGGPDVSGETLTRMFS 257
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 209
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 53.2 bits (122), Expect = 4e-06
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
L ++++++TG L Y+ + A+ V+YI V+ G +R LH A + I +HI
Sbjct: 46 LMMLVEMVTGALLMTVYSPSEASAWGSVHYIETQVDLGWFVRGLHHYTAHMMIVAIVVHI 105
Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
I + +++ LP Q +W + T + +P +
Sbjct: 106 FLVIISAGYRKPKEFIYWTSLLIGGVIIGLTITGNPLPWDQKGYWSYQIETGIAGTMPVI 165
Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
G+ L + + GG N TLTR YT
Sbjct: 166 GSTLRSLVVGGSEFGNLTLTRLYT 189
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 52.8 bits (121), Expect = 6e-06
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Frame = +3
Query: 93 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN-GASFFFICIYLHIGRG 269
IQII+G+ L +YY + V+ + N + H GA+FF +YLH+ G
Sbjct: 50 IQIISGMVLILYYNLQSQ-TLLTVHLLDNGRNSLRMALQAHTRTGANFFMAIVYLHMFTG 108
Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL---LSAIPYL 434
IYY ++ + V + Y+LP GQ+S+WG V T + L+ P L
Sbjct: 109 IYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGFIVTTEIPGSLADAPIL 168
Query: 435 GTI-------LVN*I*GGFAVDNATLTRFY 503
I +V + GG+ V + TL R +
Sbjct: 169 KPIFKAIAETIVLWMKGGYVVTDVTLGRVF 198
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 52.4 bits (120), Expect = 8e-06
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
++Q TG+ L Y A+ + YI + G ++R LH GAS + + LH+ +
Sbjct: 49 MVQAFTGILLAFNYAPTPGEAYNSLRYILTELTAGRLMRGLHHWGASMIIVVVVLHMVQV 108
Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
Y ++ + + Y+LP ++WG V T + + P +G
Sbjct: 109 FLYGAYKKPREATWMVGVVLFLVTLAYGLTGYLLPWDNRAYWGTVVATKIAAQAPVVGPY 168
Query: 444 LVN*I*GGFAVDNATLTRFY 503
L + G +V T RFY
Sbjct: 169 LSRLLGGEGSVGVVTFARFY 188
>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
N-terminal domain - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 358
Score = 51.2 bits (117), Expect = 2e-05
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Frame = +3
Query: 78 ALCLIIQI-ITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYL 254
+L L++ + ++G FL YY+ A+ V++ +V +G I+R +H + + + L
Sbjct: 44 SLVLVVMLFLSGAFLMFYYSPTPGAAYDSVDFAQFSVPFGDIVRGVHYYAWNLLLVVLGL 103
Query: 255 HIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 428
H+ ++ ++V + +LP Q +W V +++S+IP
Sbjct: 104 HLAGTFLTAAYQAPRQFVWISGVLIMLVVPLFIITGDLLPWDQKGYWTTQVRNSIISSIP 163
Query: 429 YLGTILVN*I*GGFAVDNATLTRFY 503
+G + + + GG TLTRFY
Sbjct: 164 VVGDLTLRLLQGGPRTGIVTLTRFY 188
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
L++QI+TG+ L + Y A+ + Y+ +G ++R +H A+ + + +H+ +
Sbjct: 51 LMLQIVTGVCLAMIYQPTAADAYASLEYLNYEAPFGWLLRAIHYWSATGMVVMLMVHMTQ 110
Query: 267 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+F + + VL S+WG +V + +P+ G
Sbjct: 111 VFLMGAFKYPRELTWIVGVGLLTTTLVLAFTGQVLRYDGDSYWGVSVAVSAAGRVPFAGP 170
Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
+V+ I GG + + TL+RF+T
Sbjct: 171 SIVHLILGGEYIGSETLSRFFT 192
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 83 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYR 262
+ N N +W + + LH ++ N F +LP+CKL L +S TC W + +L+L +YR
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWRILLLHLYLSSYR 66
Query: 263 TRNLL 277
+R +L
Sbjct: 67 SRPIL 71
>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
Cytochrome b6 - Halobacterium salinarium (Halobacterium
halobium)
Length = 270
Score = 50.0 bits (114), Expect = 4e-05
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYY-------TANIE---IAFYRVNYICRNVNYG*IIRTLHANGAS 230
L ++ I+G L YY T ++ +A+ V I ++N+G +R+LH A
Sbjct: 87 LSYVVAAISGALLGFYYSPSAAAATCGVDGSTVAYCAVAGIMTDLNFGFFLRSLHRWAAQ 146
Query: 231 FFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 398
++LH+ R G Y E + + L Y+LP Q+++W
Sbjct: 147 VMTAAVFLHMLRVYFTGSYKEPREVNW--LIGIVLLSLTMVFGYTGYLLPWDQLAYWAGQ 204
Query: 399 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
+ + +IP +G + + GGF++ ATL R Y
Sbjct: 205 IGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQRMY 239
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 49.6 bits (113), Expect = 5e-05
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
+I + TG+ L YY + A+ R+ + V +G +R +H A ++LH+ R
Sbjct: 81 VILVATGILLMFYYVPSTTQAYDRMLDLRGTVAFGTFLRNMHRWSAHGMVAIVFLHMCRV 140
Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
+ S+ ++ + Y+LP Q++FW TV T++ P +G
Sbjct: 141 FFTGSYKKPREFNWVLGVVLFLLTLFLSFTGYLLPWDQLAFWAITVGTSIAGYAPVVGQD 200
Query: 444 LVN*I*GGFAVDNATLTRFY 503
+ + G V L RFY
Sbjct: 201 IKFLLLGDATVGQEALLRFY 220
>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
protein - Plesiocystis pacifica SIR-1
Length = 587
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +3
Query: 96 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 275
Q++ G+ L YY+ + A+ YI V G +R LH +G+S + LH+ + +
Sbjct: 47 QVVLGILLATYYSPSATDAWASTAYIQDQVAGGWFLRGLHHHGSSAMVVVTLLHLMQVVL 106
Query: 276 YESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 449
++ + Y+LP Q +W V T ++ +P G +
Sbjct: 107 AGAYRAPREVNWWTGLAMGGLVLAFALTGYLLPWDQKGYWATQVATGIMGTVPG-GEPMQ 165
Query: 450 N*I*GGFAVDNATLTRFY 503
+ + GG N T+TRFY
Sbjct: 166 HALQGGDQYGNLTITRFY 183
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 47.2 bits (107), Expect = 3e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3
Query: 219 NGASFFFICIYLHIGRGIYYESFNL 293
NGAS FF+C+++HIGRG+YY SF L
Sbjct: 21 NGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 46.4 bits (105), Expect = 5e-04
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +3
Query: 384 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXX 548
FWG +VI NLL+ IP++G VN GGF V ATLTRFYT
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 549 XXXXXXXQTGSNNP 590
+ GS+NP
Sbjct: 62 LHLVFLHEGGSSNP 75
>UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome b/b6-like
protein - Planctomyces maris DSM 8797
Length = 478
Score = 45.2 bits (102), Expect = 0.001
Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Frame = +3
Query: 81 LC-LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
LC ++Q++TG+ L + Y E + + YI G ++R +H GAS + +H
Sbjct: 46 LCAFVVQVLTGISLAMSYVPGGENTYESLVYITNTAPLGSLVRGMHYYGASAMVMLAVIH 105
Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
+ + + ++ + + +L W TV + P
Sbjct: 106 MVQVYMHATYKYPREMNWMSGVVLLFVVLGMAFTGQLLRWDANGVWSVTVAAEMAGRTPI 165
Query: 432 LGTILVN*I*GGFAVDNATLTRFY 503
+G L + I GG V +T+TRF+
Sbjct: 166 IGPTLAHFILGGETVGGSTITRFF 189
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 357 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
Y+LP Q+S+W T++TN+L +P +G L + GG V+ TL+ FY
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFY 93
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 44.4 bits (100), Expect = 0.002
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
++ ++ FL + + I I +Y + V++ +IR+ H S F +Y+HI
Sbjct: 17 VVCVVHDFFLVVLFV-QIGILYYFYEILI--VDF--VIRSTHICFTSLLFFLLYIHIFIK 71
Query: 270 -----IYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
I +++ L +V YVLP +S+WG TV +N+L+ +P +
Sbjct: 72 CIVLIILFDTHILVWV--VGFVIYIFIVIIGFIGYVLPCTMMSYWGLTVFSNILATVPVI 129
Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
GT L I G +++ TL + +
Sbjct: 130 GTWLCYWIWGSEYINDFTLLKLH 152
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 44.4 bits (100), Expect = 0.002
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +3
Query: 87 LIIQIITGLFLT-IYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
+ +QI+ G+ L+ ++ I + I + G IIR+LH S + +Y+HI
Sbjct: 40 IALQILVGICLSWFFFRCIIPQNWIFTLLIHLEFDLGFIIRSLHIIFTSLLYFLLYIHII 99
Query: 264 RGIY----YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
+ I+ ++S L + Y LP +S+WG TV +N+L+ IP
Sbjct: 100 KVIFLCLIFDSSMLVW--FFGFLIFIFILIIAFIGYTLPCTSMSYWGLTVFSNILATIPL 157
Query: 432 LGTILVN*I*GGFAVDNATLTRFYT 506
+G + I +++ TL + ++
Sbjct: 158 IGIYICQWIWCSEFINDFTLLKLHS 182
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 396 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 506
TVITNLLS+IP G ++V I GG++V N TL RF++
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFS 37
>UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep:
Cytochrome b - Laniarius aethiopicus
Length = 98
Score = 41.9 bits (94), Expect = 0.011
Identities = 29/96 (30%), Positives = 46/96 (47%)
Frame = +2
Query: 68 IPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLH 247
+P M N++N + ++ L S++ S ++PK + + N TC S YLH
Sbjct: 3 LPARPMLNHTNCHRTTTSHALXSRHYPSLFLRSPHMPKRTIRMTNPKPTCKRSLPILYLH 62
Query: 248 LFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHR 355
L T+ TR LL + + + +Y NSNCF R
Sbjct: 63 LPTHWTRILLWLISKQRNLKRRSYPTPNPNSNCFRR 98
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 408 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 506
N+LSAIP++G V + GGF+V+NATL RF++
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFS 60
>UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter
violaceus|Rep: Cytochrome b6 - Gloeobacter violaceus
Length = 217
Score = 41.5 bits (93), Expect = 0.014
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
L++ ++TG+ L + ++ A+ I ++G +R LH +S +C
Sbjct: 50 LVLALLTGVLLGANFVPSLG-AYDSTRQITYQTSFGWAVRGLHWWASSLTLVCSLAFTAL 108
Query: 267 GIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
+Y F K++ Y LP Q ++W + NLL+ +P LG
Sbjct: 109 AYWYGYFRGPAKWMWWTGLVMGLMLLGANVTGYYLPLDQNAYWRLMIEANLLADVPVLGA 168
Query: 441 ILVN*I*GGFAVDNATLTRFY 503
+ + G V +A++ R +
Sbjct: 169 AVKYFLLNGSGVSDASIARIH 189
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.025
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 87 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 191
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7;
Desulfuromonadales|Rep: Cytochrome b/b6 - Geobacter
sulfurreducens
Length = 206
Score = 40.7 bits (91), Expect = 0.025
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 2/137 (1%)
Frame = +3
Query: 99 IITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYY 278
I++G+ L YY + AF + ++ V G +R LH + F ++LHI R +
Sbjct: 39 IVSGVLLLFYYQPTPDRAFDSILFLESTVVGGKYLRALHRLASHGFLCLMFLHILRVVLT 98
Query: 279 ESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN 452
+F + + Y+LP Q++FW LL+ P G +
Sbjct: 99 GAFRPPRELTWVVGVGLLGLSVFEAYTGYLLPMDQLAFWATRTGMELLATFPGGGWLRAV 158
Query: 453 *I*GGFAVDNATLTRFY 503
+ G ++ +L RFY
Sbjct: 159 LVPDGVG-ESLSLLRFY 174
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 39.1 bits (87), Expect = 0.076
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
I+++ITG + +YYT + + Y+ V YG + +LH+ GA + +H+ R
Sbjct: 90 ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFLLLVHMTRN 147
Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY-LGT 440
+ ++ + + + Y LP IS+ T NL S +P+ LG
Sbjct: 148 FFVGAYRQPREIMWIVGAGLAGLTLTEAYLGYSLPYNLISWVATTTGLNLFSYMPFNLGY 207
Query: 441 IL 446
++
Sbjct: 208 LI 209
>UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep:
Cytochrome b - Thermoplasma volcanium
Length = 537
Score = 39.1 bits (87), Expect = 0.076
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +3
Query: 90 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
+ +++TG+ L YY + A+ +V YG II T H GA +Y+H+ R
Sbjct: 49 LYEVVTGIILLFYYQPSN--AYTSTETFLHSVPYGEIILTTHLYGAYIMIALVYIHLLRN 106
Query: 270 IYYESF 287
I+ ++
Sbjct: 107 IFVGAY 112
>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
Cytochrome b - Lyristes plebejus
Length = 132
Score = 38.7 bits (86), Expect = 0.10
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 428 LFRNYISKLNLRGICCR*CYINPILHISFFITVHY 532
L YISKLNL ICC N IL +FF T+HY
Sbjct: 14 LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48
>UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep:
Cytochrome b - Sulfolobus acidocaldarius
Length = 563
Score = 38.7 bits (86), Expect = 0.10
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 99 IITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 275
IITGLFL +YY A+ I +V YG ++ H G+ + Y+H+ R Y
Sbjct: 51 IITGLFLLLYYQP--AFAYQSTQTIINSVPYGSVLLFSHLYGSYIMILLAYIHMFRNFY 107
>UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla
cristata|Rep: Cytochrome b - Pseudourostyla cristata
Length = 393
Score = 37.9 bits (84), Expect = 0.18
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +3
Query: 81 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
+ +++Q+++G FL YY + + + +G + +H G F+ YLHI
Sbjct: 42 IAIVLQVLSGFFLGWYYIPEPGLVVELREEMFNDTRFGAEVFYMHVRGVDTIFVLSYLHI 101
Query: 261 GRGIYYESF 287
+ IY +++
Sbjct: 102 LKKIYLKNY 110
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 37.5 bits (83), Expect = 0.23
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 225 ASFFFICIYLHIGRGIYYESFNLKYV 302
AS FFI +YLHI RG+YY S+ ++V
Sbjct: 23 ASMFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep:
Cytochrome b - Gallus gallus (Chicken)
Length = 113
Score = 35.5 bits (78), Expect = 0.94
Identities = 28/103 (27%), Positives = 55/103 (53%)
Frame = +2
Query: 53 LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 232
+MK+R+P S + ++ N + ++ LHS++ S L +LP+ + L + I
Sbjct: 1 MMKFRLPISSLPHDPNPHRPTTSHALHSRHIPSLLLRSPHLPERTIRLTHPESPRKRRLI 60
Query: 233 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLC 361
+L+L ++RTR +L + L+ + + + +T+S HRLC
Sbjct: 61 LLHLYLPSHRTRPILRLLPLQGNLKHRSNPPPHTHS---HRLC 100
>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
Length = 112
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 395 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 511
N ++KS IC P++ + +NL + CR + N ILH+S
Sbjct: 2 NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -2
Query: 424 IADNRFVITVAPQKDI*PQGKT 359
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus
tetradactylus|Rep: Cytochrome b - Petrodromus
tetradactylus (Four-toed elephant shrew)
Length = 82
Score = 33.9 bits (74), Expect = 2.9
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 98 NYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL 277
N W I ++ LH ++ + L S +LP KL + N C S YL +++ RTR LL
Sbjct: 8 NPNWPIPSHALHLRHPHRILLSNPHLPGRKLRMTNPLYPCQRSLPILYLPIYSRRTRYLL 67
>UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 358
Score = 33.9 bits (74), Expect = 2.9
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 113 IFNNILH--SKY*NSFL*SKLYLPKCKLWLNNSNITC*WSF--IFFYLHLFTYRTRNLL* 280
IFN +LH + Y N + KLYL L+ N S I +SF IFF+L +F Y + +
Sbjct: 281 IFNTVLHWINIYLNFTMSKKLYLKYKTLYKNISFIFSYFSFDEIFFFLLIF-YSSFFITS 339
Query: 281 IF*LKICMINWNYNFI 328
L +C+ + YNFI
Sbjct: 340 SL-LSLCLFYYIYNFI 354
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 33.5 bits (73), Expect = 3.8
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 396 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 506
+V TN LS +PYLG L+ I GG V ++ RF++
Sbjct: 3 SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFS 39
>UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep:
Cytochrome b - Halobacterium mediterranei (Haloferax
mediterranei)
Length = 485
Score = 33.1 bits (72), Expect = 5.0
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 21/161 (13%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYY---TANIEI--------------AFYRVNYICRNVNYG*IIRTL 212
C ++ ++TG+FL +++ T++++ AF V +I ++ +G IR +
Sbjct: 54 CFLLLVLTGMFLGMFFEPSTSDVKYEGSVAKFQGEEVPEAFASVLHITYDIPFGMFIRRM 113
Query: 213 HANGASFFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQI 380
H A F I LH+ R G Y +V Y LP +
Sbjct: 114 HHWAAHLFVASIGLHMLRVFFTGAYRNPREPNWV--VGTALAGLSMGAAYTGYALPFDEF 171
Query: 381 SFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
+ + NL ++IP +G ++ GG +AT+ R Y
Sbjct: 172 AATATGIGYNLATSIPLVGEVIGKAFFGGEFPSSATIPRLY 212
>UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;
n=4; Magnetospirillum|Rep: Cytochrome b subunit of the
bc complex - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 524
Score = 32.7 bits (71), Expect = 6.6
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 105 TGLFLTIYYTANIEIAFYRVNYICRNVNY-G*IIRTLHANGASFFFICIYLHIGR 266
+GL+L + Y + A+ + YI R Y G +IR+LH G+ + + LH+ R
Sbjct: 48 SGLYLFVPYDTSAVRAWNSIEYISREQWYWGGLIRSLHRYGSDAMVLTMMLHLVR 102
>UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1;
Guillardia theta|Rep: Putative U5 snRNP-specific protein
- Guillardia theta (Cryptomonas phi)
Length = 1436
Score = 32.7 bits (71), Expect = 6.6
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Frame = +2
Query: 89 NNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTR 268
N S FNN+ HSK + FL K+ L+ + C +++ F ++ Y +
Sbjct: 1224 NKSGLKNFYFNNVKHSKVEDKFL--KITKLHKNLFYKSDKKKC-LNYLLFIFYI--YNWK 1278
Query: 269 NLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN-YI 445
NL L IC I NY F Y+ + L+ FL RN K II F N Y
Sbjct: 1279 NLYLNEKLNIC-IKQNY-FYYSGFLYYDYNIKKLKK--FLAFFRNSKIIIIREKFINLYS 1334
Query: 446 SKLNLRGIC 472
S+++L C
Sbjct: 1335 SEISLSNSC 1343
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 6.6
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 186 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 43
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
>UniRef50_Q7M2C0 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 255
Score = 32.3 bits (70), Expect = 8.7
Identities = 30/117 (25%), Positives = 44/117 (37%)
Frame = +3
Query: 84 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
CL II LF Y +I FY + + +IR H ++F LHI
Sbjct: 39 CLFSMIIFVLFYM--YRTDILFYFYEILIVG-------VIRRSHICLHHYYFFFFMLHIF 89
Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
+ + Y YVLP +S+WG TV +N+L+ + L
Sbjct: 90 KLHSINNIWHTYFVCGRFCNIYIYSRIGFIGYVLPCTMMSYWGLTVFSNILATVQLL 146
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,473,621
Number of Sequences: 1657284
Number of extensions: 7677970
Number of successful extensions: 15020
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 14362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14928
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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