Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0028
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.50 
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.50 
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.50 
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.50 
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    27   0.50 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    27   0.50 
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    26   0.87 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   1.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.1  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   8.1  

>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 329 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 424
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 329 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 424
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 329 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 424
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 329 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 424
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 98  DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 129


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 329 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 424
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 116 DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 147


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 329 DQAPEDGLTCGTPSIRTAYPEDG*TSASSSGC 424
           DQ   D +T GT S++ +YP D  T+ +  GC
Sbjct: 116 DQFGLDFMTSGTLSLQGSYPTDHCTNDAFYGC 147


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 25.8 bits (54), Expect = 0.87
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 448 PTRHQFYLHAKLDLTEG 498
           P +H F++H K DLT+G
Sbjct: 59  PGKHGFHIHEKGDLTDG 75


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 407 ASSSGCPLTCSSTNRRGISSTCTP 478
           A +S CP+ CSS   R  S  C P
Sbjct: 57  AQASTCPVPCSSIWSRPSSMRCAP 80


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 347 GLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRG 457
           G  C  PS+ +  P    + +SSS    + SST+  G
Sbjct: 776 GSRCSKPSVTSTTPPTPASLSSSSSSSSSASSTSLCG 812


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 451 TRHQFYLHAKLDLT-EGRLVVAD 516
           TRH FY H K+ ++ + +L+  D
Sbjct: 829 TRHPFYFHYKVGVSKDDKLLAGD 851


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,800
Number of Sequences: 2352
Number of extensions: 11662
Number of successful extensions: 42
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)