Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0028
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 52 3e-07
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 52 3e-07
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 30 0.86
Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 29 1.5
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.6
AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lecti... 28 4.6
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 27 6.1
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 27 6.1
AY652946-1|AAT73713.1| 708|Caenorhabditis elegans guanylate cyc... 27 6.1
AF038609-4|AAU87824.1| 708|Caenorhabditis elegans Guanylyl cycl... 27 6.1
Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 51.6 bits (118), Expect = 3e-07
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Frame = +1
Query: 217 LEIKVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRI--PG 390
L I V NA+G E E+V L++ E DYFGL+ WL+ + P
Sbjct: 47 LNIVVPRNAVGSELYEEVFYSLDL-EERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPP 105
Query: 391 GRLDLRVKFWV--PPHLLINEPTRHQFYLHAKLDLTEGRL 504
L RVKF+ P L E TR+QF+L K D++ GRL
Sbjct: 106 FTLRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRL 145
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 51.6 bits (118), Expect = 3e-07
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Frame = +1
Query: 217 LEIKVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRI--PG 390
L I V NA+G E E+V L++ E DYFGL+ WL+ + P
Sbjct: 63 LNIVVPRNAVGSELYEEVFYSLDL-EERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPP 121
Query: 391 GRLDLRVKFWV--PPHLLINEPTRHQFYLHAKLDLTEGRL 504
L RVKF+ P L E TR+QF+L K D++ GRL
Sbjct: 122 FTLRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRL 161
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 51.2 bits (117), Expect = 4e-07
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 205 NSVILEIKVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPG----RWLNLRNPLD 372
+S +++ N++G LEKV LEI E DYFGL +WL+ L
Sbjct: 37 DSTSYHFEIEKNSLGIVLLEKVFNYLEI-IEKDYFGLVFIAVDNSSAQQKKWLDPSKNLR 95
Query: 373 PHRI-PGGRLDLRVKFWV-PPHLLINEPTRHQFYLHAKLDLTEGRL 504
I P L RVKF+V P+ L +E TR QFY + +L EGRL
Sbjct: 96 KQMICPPYHLFFRVKFYVRDPNRLRDEFTRFQFYQQVRQNLEEGRL 141
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 51.2 bits (117), Expect = 4e-07
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 205 NSVILEIKVDPNAIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPG----RWLNLRNPLD 372
+S +++ N++G LEKV LEI E DYFGL +WL+ L
Sbjct: 37 DSTSYHFEIEKNSLGIVLLEKVFNYLEI-IEKDYFGLVFIAVDNSSAQQKKWLDPSKNLR 95
Query: 373 PHRI-PGGRLDLRVKFWV-PPHLLINEPTRHQFYLHAKLDLTEGRL 504
I P L RVKF+V P+ L +E TR QFY + +L EGRL
Sbjct: 96 KQMICPPYHLFFRVKFYVRDPNRLRDEFTRFQFYQQVRQNLEEGRL 141
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 48.4 bits (110), Expect = 3e-06
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Frame = +1
Query: 241 AIGQECLEKVCEKLEIGAEADYFGLRVCPGSGPGRWLNLRNPLDPHRIPGGRLDLR---- 408
AIGQ L++VC L + E DYFGL +G WL+ R +I G D +
Sbjct: 65 AIGQTLLDEVCRHLNL-LECDYFGLSFIDINGNHCWLD-REKTILRQITNGSTDAKFYFV 122
Query: 409 VKFWVP-PHLLINEPTRHQFYLHAKLDLTEGRLVVAD 516
VKF+ P P L E TR+ F + K DL G L +D
Sbjct: 123 VKFYTPNPIDLEEEYTRYLFTMQIKRDLALGELHCSD 159
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 30.3 bits (65), Expect = 0.86
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Frame = +2
Query: 278 NWRSVPRQTISVCA---CAQDQAPEDGLTCGT--PSIRTAYPEDG*TSASSSGCPLTCSS 442
N +Q IS CA CAQ + +CG P I P+ + S C TC +
Sbjct: 104 NCNQCQQQCISSCATPICAQSCNNQCSSSCGNSAPQIVVLQPQQNQCGSCQSSCQQTCPT 163
Query: 443 TNRRGISSTCTP 478
N S C P
Sbjct: 164 CN---CQSACAP 172
>Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical
protein ZK909.2c protein.
Length = 548
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 377 CGSRGFRKLSHLPGPDPGHTRRPK*SASAPISNFSH 270
CGS+ ++ G D + R+P S SAP+S H
Sbjct: 192 CGSKDDTDAENMEGLDDDYLRQPTTSTSAPVSPIDH 227
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 376 HRIPGGRLDLRVKFWVPPHLLINEPT 453
H+IPGG++D+ V+ WV I++ T
Sbjct: 80 HKIPGGQVDVEVEVWVQEITTISDIT 105
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 302 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 466
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1204 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1258
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 302 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 466
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1217 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 302 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 466
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1205 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1259
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 302 TISVCACAQDQAPEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 466
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1217 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
>AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lectin
protein 85 protein.
Length = 280
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 338 PEDGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSS 442
P +T S T YP G T S+SG P++ S+
Sbjct: 246 PASSMTDSPASGATGYPASGATDYSASGAPVSAST 280
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
F39B2.4b protein.
Length = 1589
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 221 KSRWTQMRLVKSALRRYARNW 283
K W +RLV LRRY NW
Sbjct: 1274 KDLWYTLRLVMPYLRRYYENW 1294
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
F39B2.4a protein.
Length = 1587
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 221 KSRWTQMRLVKSALRRYARNW 283
K W +RLV LRRY NW
Sbjct: 1272 KDLWYTLRLVMPYLRRYYENW 1292
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 221 KSRWTQMRLVKSALRRYARNW 283
K W +RLV LRRY NW
Sbjct: 1272 KDLWYTLRLVMPYLRRYYENW 1292
>AY652946-1|AAT73713.1| 708|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 708
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 186 HFGQHFERKYVKFNKSGRKIFSLMNLTHVTIVYLTRANI--YLKKSFLIR 43
H G + R+Y NK K+ LM L + + LT N+ YL F+ +
Sbjct: 246 HIGIYLLREYGLENKKTLKVSDLMQLVQPSDIQLTYKNVLSYLNTLFIFQ 295
>AF038609-4|AAU87824.1| 708|Caenorhabditis elegans Guanylyl cyclase
protein 37 protein.
Length = 708
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 186 HFGQHFERKYVKFNKSGRKIFSLMNLTHVTIVYLTRANI--YLKKSFLIR 43
H G + R+Y NK K+ LM L + + LT N+ YL F+ +
Sbjct: 246 HIGIYLLREYGLENKKTLKVSDLMQLVQPSDIQLTYKNVLSYLNTLFIFQ 295
>Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical
protein F46B3.2 protein.
Length = 190
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +1
Query: 142 FIKFYVFSFEMLTKMWLVSQPNSVILEIKVDPNAIGQECLEKVCEKLEIGAEADYFGLRV 321
F K VF F K +L + K DPN C VC E D + ++
Sbjct: 39 FTKLQVFQFRSCDKSFLAKKKKYTCGLCKKDPNVCSDTC--TVCPMDMSPCETDQY-QKI 95
Query: 322 CP 327
CP
Sbjct: 96 CP 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,293,496
Number of Sequences: 27780
Number of extensions: 271302
Number of successful extensions: 731
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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