Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0027
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 109 2e-24
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 109 2e-24
05_01_0043 - 295041-295173,296252-296537,296616-296697 109 2e-24
01_07_0267 + 42410174-42410252,42410679-42411097 105 3e-23
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 60 4e-20
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 56 2e-08
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 36 0.040
04_01_0244 - 3194141-3195091,3195301-3195312 33 0.22
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382... 32 0.50
07_01_0469 - 3552409-3553368 31 1.1
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 30 1.5
09_06_0081 + 20745627-20748144,20748211-20748308 29 2.6
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 2.6
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 29 2.6
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 3.5
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 29 3.5
10_07_0029 + 12031711-12032464,12044289-12044386 29 4.6
09_06_0223 + 21659549-21659729,21659888-21659979 29 4.6
07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520 29 4.6
04_04_1125 + 31085106-31085714 29 4.6
03_01_0570 - 4205739-4205776,4205846-4205897,4205939-4206067,420... 29 4.6
05_03_0591 + 15892772-15893412,15893478-15893910 28 6.1
03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826 28 6.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.1
06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587... 28 8.1
02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785... 28 8.1
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 8.1
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 109 bits (263), Expect = 2e-24
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+L
Sbjct: 71 IIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKL 130
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIFAE L LYGLIV I L
Sbjct: 131 FVGMILILIFAEALALYGLIVGIIL 155
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 73 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 252
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 14 FGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73
Query: 253 IYL 261
+ +
Sbjct: 74 VII 76
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 109 bits (263), Expect = 2e-24
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+L
Sbjct: 71 IIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKL 130
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIFAE L LYGLIV I L
Sbjct: 131 FVGMILILIFAEALALYGLIVGIIL 155
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 73 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 252
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 14 FGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73
Query: 253 IYL 261
+ +
Sbjct: 74 VII 76
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 109 bits (262), Expect = 2e-24
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+L
Sbjct: 72 IIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKL 131
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIFAE L LYGLIV I L
Sbjct: 132 FVGMILILIFAEALALYGLIVGIIL 156
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 73 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 252
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 15 FGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74
Query: 253 IYL 261
+ +
Sbjct: 75 VII 77
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 105 bits (253), Expect = 3e-23
Identities = 54/85 (63%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
++AV+I + A Y + G +HL AGLA G LAAG AIG+VGDAGVR AQQP+L
Sbjct: 71 IIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGVVGDAGVRANAQQPKL 130
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIFAE LGLYGLIV I L
Sbjct: 131 FVGMILILIFAEALGLYGLIVGIIL 155
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1
Query: 64 YKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 243
+ GFI GA LA+ FS + A + G +P L + I+ ++ A VLG+YGL
Sbjct: 13 FLGFI--GAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVLGIYGL 70
Query: 244 IVAIYL 261
I+A+ +
Sbjct: 71 IIAVII 76
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 60.1 bits (139), Expect(2) = 4e-20
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 162
++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 73 IIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 124
Score = 56.0 bits (129), Expect(2) = 4e-20
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +1
Query: 157 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 261
+R AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 155 LRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 189
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 73 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 252
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 16 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 75
Query: 253 IYL 261
+ +
Sbjct: 76 VII 78
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +1
Query: 61 LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYG 240
L G+ +GL VGF+ L G +GI+G + AQ LFV +++I IF LGL+G
Sbjct: 100 LRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFG 159
Query: 241 LIVAIYL 261
+IV I +
Sbjct: 160 VIVGIIM 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 73 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 252
F +G +++G S L A + I I G + + + PR+ ++ +IF E + +YG+IVA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 253 IYL 261
I L
Sbjct: 80 IIL 82
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 35.5 bits (78), Expect = 0.040
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -2
Query: 216 ENKNKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFVKGVV 52
E +KN DE P LS+T C H+ YG+ G + + ++ VD P+V G+V
Sbjct: 880 EKCSKNEHDEAPLGLSNT---CKEHE-YGDKGPENLTKPGEPASSVDVPYVNGIV 930
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 233 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 84
R T+A +RI++ P N P PA+P +P A PAA P AP
Sbjct: 196 RKTTTAPVRIQLAPRNP----PPPAAPAAPPVPPAVPAAPAPAPVHMSAP 241
>07_03_1215 +
24937016-24937229,24937418-24937623,24938135-24938207,
24938619-24938812
Length = 228
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 137 PMAKPAARPENPTAKPAPKWM 75
P AKPAA+P+ P KP P+ M
Sbjct: 91 PAAKPAAKPKKPPVKPLPEMM 111
>07_01_0469 - 3552409-3553368
Length = 319
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 233 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 84
R +T+A +RI++ P N PA+P +P A PA P P P P
Sbjct: 192 RKSTTAPVRIQLAPRNP----PPSAAPAAPPVPPAAPAV-PAAPALAPVP 236
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 34 ALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILI 207
AL+ P P+ +G + LG + V +GL +V A VRG GM+L+
Sbjct: 333 ALEAP---PMPRGSVGLGMAVRVAMAGLGTNRVAAVVSAAAVRGHNAGGGALEGMVLV 387
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 212 IRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPA 87
+R R PT+ A PR P P A PAA P P+ P+
Sbjct: 701 LRARRAPTSPPAA-ATPRAPTPPAAAAAAPAAPPALPSGLPS 741
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 164 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 66
P PA MP P P PT P P W PL
Sbjct: 132 PPPPARTPMPTPTPTPTP-TPTRPPVPVWAAPL 163
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 30 WCPPGASQLPPLQRVHPLG 86
W PPG +LPPL +H G
Sbjct: 44 WAPPGEPRLPPLLLIHGFG 62
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 170 AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 66
A P P P P PAA P P PAP+ P+
Sbjct: 219 APPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPM 253
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 28 AGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 162
+GA EP P+ + G A+ F G AG A+G+VG++G R
Sbjct: 9 SGAAAEPPPTPVAR----YDRGGALIFGGRFAGVAVGVVGESGSR 49
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 233 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTA 96
R T+A +RI++ P N PA+P +P A PAA+ P +
Sbjct: 192 RKTTTAPVRIQLAPRNP----PPAAAPAAPPVPPAVPAAQAPAPAS 233
>09_06_0223 + 21659549-21659729,21659888-21659979
Length = 90
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 370 YRRRPSLCASSDSDNEHRGSEHGRRE 293
++RR S DNE +G +HGRRE
Sbjct: 35 WQRRKRDTNGSGKDNEGKGGQHGRRE 60
>07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520
Length = 568
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -2
Query: 351 CARLQTQIMSIEA--RSTGDGSGVCSGR 274
C+R++TQ+ ++A R+TG G G +GR
Sbjct: 529 CSRMKTQMSKMKAARRATGGGGGAAAGR 556
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 164 PRTPASPTMPMAKPAARPENPTAK 93
P TPA+PT P PA P PT K
Sbjct: 89 PATPATPTTP-PTPAPAPSTPTGK 111
>03_01_0570 -
4205739-4205776,4205846-4205897,4205939-4206067,
4206183-4206258,4206360-4206412,4206494-4206555,
4206624-4206734,4206813-4206979,4207089-4207268,
4207598-4207687,4207773-4207921,4208367-4208501,
4208575-4208630,4208790-4208823,4209409-4209519
Length = 480
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 298 VARAPSLYAHYLSLKTRTGM---VVAGSGSTLH-RVSEHPSTLVYYICSLLVFTYLQTGA 465
+ R+P + H LSL + GM +VA GS H + E+PS ++ + S+ + L+
Sbjct: 21 IGRSPRMQYHSLSLANQAGMEVDIVANGGSDPHLLLRENPSIHIHEMKSVQLTGILKISG 80
Query: 466 A 468
A
Sbjct: 81 A 81
>05_03_0591 + 15892772-15893412,15893478-15893910
Length = 357
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 289 CVFRAFILCTGRWRR*VRKDPILQRK 212
C RA ++C RWRR + DP QR+
Sbjct: 28 CAVRASLVCK-RWRRLLTDDPCFQRR 52
>03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826
Length = 196
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 76 IHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 180
+HL G+AVG GL G + GD R A+ P
Sbjct: 160 VHLDVGVAVGDQGLEVGLL--VAGDEAERAQARAP 192
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 164 PRTPASPTMPMAKPAARPENPTAKPAPKWM 75
P PA P P AA NP A P P M
Sbjct: 727 PSAPAPPLPPPLPAAANKRNPPAPPPPPLM 756
>06_01_0785 -
5873244-5873357,5873458-5873562,5874333-5874424,
5874525-5874594,5875080-5875202,5875287-5875372,
5875547-5875648,5875874-5876096,5876217-5876282,
5876407-5876497,5876574-5876701,5877734-5877749,
5878171-5878318,5878440-5878511,5878586-5878690,
5879122-5879291,5880093-5880424
Length = 680
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = -3
Query: 254 MATISP*RPNTSAKIRIRIIPTNNLG--C*AVPR--------TPASPTMPMAKPAARPEN 105
+A+ISP R + SA +R +P L + PR T ASP A E
Sbjct: 5 LASISPARLSASASHLLRALPRIRLRRPLASAPRMSSSSSSTTAASPAAAAADGGGTGEK 64
Query: 104 PTAKPAPKWMNPL 66
P A P W +P+
Sbjct: 65 PVAAPYGSWRSPI 77
>02_05_0544 +
29876337-29876524,29876850-29876882,29878390-29878577,
29879755-29879811,29879909-29880061,29880812-29881278,
29881477-29881635,29881718-29881834,29881966-29882117,
29883436-29883530,29883619-29884525,29884604-29884688,
29884775-29884843,29885045-29885224,29885367-29885495
Length = 992
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = -1
Query: 529 KVFSKNIQIHVSRCGAAAATRLHRSGDM*KRAGNKCNIQEWKGAPKPYARWTR--YRRRP 356
KVFS N Q H + + + + H+S M G + G+PKPY+ + R P
Sbjct: 593 KVFSNNNQPHGAAFQHSHSYQDHKSEHMSSSPGTLTGPEFLWGSPKPYSEHAQSPIWRPP 652
Query: 355 SL--CASSDSDNEHRGSEHGRREWCVF 281
++ S++ ++ +G +G R+ +F
Sbjct: 653 AIGHAIPSNTRSQGQGLLYGGRQASLF 679
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 132 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 28
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,438,356
Number of Sequences: 37544
Number of extensions: 513905
Number of successful extensions: 1926
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1919
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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