Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0027
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 119 2e-27
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 119 2e-27
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 119 2e-27
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 119 2e-27
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 105 2e-23
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 105 2e-23
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 63 2e-10
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 32 0.45
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 31 0.78
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 31 0.78
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 2.4
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 29 3.2
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 3.2
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 5.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 5.5
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 7.3
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 7.3
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 7.3
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 7.3
Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 119 bits (286), Expect = 2e-27
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
VVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74 VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 43 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 223 VLGLYGLIVAIYL 261
++G+YGL+VA+ L
Sbjct: 67 IIGIYGLVVAMVL 79
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 119 bits (286), Expect = 2e-27
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
VVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74 VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 43 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 223 VLGLYGLIVAIYL 261
++G+YGL+VA+ L
Sbjct: 67 IIGIYGLVVAMVL 79
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 119 bits (286), Expect = 2e-27
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
VVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74 VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 43 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 223 VLGLYGLIVAIYL 261
++G+YGL+VA+ L
Sbjct: 67 IIGIYGLVVAMVL 79
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 119 bits (286), Expect = 2e-27
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
VVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74 VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 43 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 223 VLGLYGLIVAIYL 261
++G+YGL+VA+ L
Sbjct: 67 IIGIYGLVVAMVL 79
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 105 bits (253), Expect = 2e-23
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
VVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR +QQPR+
Sbjct: 82 VVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRM 141
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 142 FVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 105 bits (253), Expect = 2e-23
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
VVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR +QQPR+
Sbjct: 82 VVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRM 141
Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 142 FVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +1
Query: 61 LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYG 240
L G++ G GL VG S L G A+GIVG A P LFV +++I IFA +GL+G
Sbjct: 139 LASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFG 198
Query: 241 LIVAI 255
+I+ I
Sbjct: 199 MIIGI 203
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 79 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 246
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 247 VA 252
+A
Sbjct: 109 MA 110
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +1
Query: 61 LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYG 240
L G++ G GL VG S L G A+GIVG A P LFV +++I IFA +GL+G
Sbjct: 139 LASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFG 198
Query: 241 LIVAI 255
+I+ I
Sbjct: 199 MIIGI 203
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 79 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 246
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 247 VA 252
+A
Sbjct: 109 MA 110
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 261 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGETGSQTRE 106
++DG++ K + K KNH+D P LL ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 261 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 127
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 261 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 127
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 416 TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 416 TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 416 TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 416 TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 416 TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 416 TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 663 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 562
S+K S+++ K+ H CN + Y V A H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 663 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 562
S+K S+++ K+ H CN + Y V A H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 161 RTPASPTMPMAKPAARPENPTAKPAPK 81
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 161 RTPASPTMPMAKPAARPENPTAKPAPK 81
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 352 GMVVAGSGSTLHRVSEHPSTLVYYICSLL 438
G++V GS S L++ +++ +V Y CSLL
Sbjct: 223 GVIVLGSNSVLYKPNDNLGEVVPYTCSLL 251
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 233 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 90
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 233 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 90
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 167 VPRTPASPTMPMAKPAARPENPTAKPAPK 81
VP P PT P +P RPE P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 164 PRTPASPTMPMAKPAARPENPTAKPAPK 81
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 164 PRTPASPTMPMAKPAARPENPTAKPAPK 81
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 164 PRTPASPTMPMAKPAARPENPTAKPAP 84
P P P P + AA PE+P P P
Sbjct: 187 PAGPPGPAGPAGEDAAAPESPPGPPGP 213
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
PRTP +P + P +P A P A+P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical
protein ZC302.3 protein.
Length = 236
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 240 SVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDAYG--ETGSQTRESYSQTSTQVDEPF 67
S++T+Y + N+N S +L+ A + +AY + R+ + + ++D F
Sbjct: 154 SLQTEYLNYKANRNDSRSPSQLVKKIKDATMKAEAYEFFMDDKRVRKVIGELN-EIDSKF 212
Query: 66 VKGVVGWLLE 37
+ + WLL+
Sbjct: 213 KENIGAWLLQ 222
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -3
Query: 164 PRTPASPTMPMAKPAARPEN--PTAKPAPKWMNP 69
P PA P+MP + A+PE P P P P
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQP 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,516,529
Number of Sequences: 27780
Number of extensions: 410293
Number of successful extensions: 1410
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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