Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0027
(694 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 160 1e-41
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.90
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.1
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 3.6
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 22 6.4
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 21 8.4
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 21 8.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.4
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 21 8.4
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 160 bits (389), Expect = 1e-41
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 10 VVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 189
VVAVLIAG L+EP Y L+KGF+HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF
Sbjct: 70 VVAVLIAGGLEEPKGYTLFKGFVHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 129
Query: 190 VGMILILIFAEVLGLYGLIVAIYLY 264
VGMILILIFAEVLGLYGLIVAIYLY
Sbjct: 130 VGMILILIFAEVLGLYGLIVAIYLY 154
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.6 bits (51), Expect = 0.90
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 377 PPCIGFRS--TLPLLYITFV---PCSFSHISRPVQPCCCGCSASGDVNLYIFT 520
PP +G++ + P +TF P + + I PV+PC C + D +++
Sbjct: 199 PPLVGWKDKRSHPAYNMTFAQNGPFNTTTIFVPVKPCPWICELTNDAGYVVYS 251
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 2.1
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = -2
Query: 267 CVQVDGDDKSVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTS 88
C+ D +S+ TQ+ +++ HSD L S +A I + + E+ ++ T
Sbjct: 328 CLDCDEIRESLDTQFLQVCRSRRHSDSCCLCLDS-MNAVIRN--FNESENRRNSCLGSTE 384
Query: 87 TQVDEPFVKGVVGWLLEGTSN 25
T + + ++ E +SN
Sbjct: 385 TYYSKHNTQQFTQYIPESSSN 405
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 3.6
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 184 LFVGMI-LILIFAEVLGLYGLIVAIY 258
L VG + LILIF V G + VAIY
Sbjct: 26 LLVGFLFLILIFLSVAGNILVCVAIY 51
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1
Query: 34 HQQSGQPRQ 8
HQ+SGQP+Q
Sbjct: 54 HQESGQPKQ 62
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 653 FFCDFYRHISFICA 694
FFCD +S +CA
Sbjct: 57 FFCDMSPSLSLLCA 70
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 651 CSLLSPKIKHMCNKLIKY 598
C+ + K KH NK++ Y
Sbjct: 72 CNKCNEKQKHTANKVVNY 89
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 606 LIYYTYVLFSVTGENISFAISIDISV 683
L T+ L S +GE ++ +ISI IS+
Sbjct: 261 LTVLTFYLPSDSGEKVTLSISILISL 286
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 606 LIYYTYVLFSVTGENISFAISIDISV 683
L T+ L S +GE ++ +ISI IS+
Sbjct: 261 LTVLTFYLPSDSGEKVTLSISILISL 286
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 651 CSLLSPKIKHMCNKLIKY 598
C+ + K KH NK++ Y
Sbjct: 72 CNKCNEKQKHTANKVVNY 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,700
Number of Sequences: 438
Number of extensions: 4512
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -