Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0026
(455 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 5.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 5.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 5.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 5.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 5.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 5.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 5.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 20 9.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 9.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 9.5
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 20 9.5
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 358 DENNSDSGSKSNAP 399
+ NNS SG SN P
Sbjct: 185 NNNNSKSGQSSNPP 198
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 358 DENNSDSGSKSNAP 399
+ NNS SG SN P
Sbjct: 185 NNNNSKSGQSSNPP 198
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 358 DENNSDSGSKSNAP 399
+ NNS SG SN P
Sbjct: 185 NNNNSKSGQSSNPP 198
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 358 DENNSDSGSKSNAP 399
+ NNS SG SN P
Sbjct: 185 NNNNSKSGQSSNPP 198
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 358 DENNSDSGSKSNAP 399
+ NNS SG SN P
Sbjct: 141 NNNNSKSGQSSNPP 154
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 358 DENNSDSGSKSNAP 399
+ NNS SG SN P
Sbjct: 185 NNNNSKSGQSSNPP 198
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 358 DENNSDSGSKSNAP 399
+ NNS SG SN P
Sbjct: 185 NNNNSKSGQSSNPP 198
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 48 NKYINVNVVSGEHINS 95
N+Y N NVV+ H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 48 NKYINVNVVSGEHINS 95
N+Y N NVV+ H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 48 NKYINVNVVSGEHINS 95
N+Y N NVV+ H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 7.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 48 NKYINVNVVSGEHINS 95
N+Y N NVV+ H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.2 bits (40), Expect = 9.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 26 SSIYSMCE*IYKCQCSF 76
S + +MC Y+ +CSF
Sbjct: 175 SGLIAMCGMYYRDECSF 191
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 9.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 26 SSIYSMCE*IYKCQCSF 76
S + +MC Y+ +CSF
Sbjct: 408 SGLIAMCGMYYRDECSF 424
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 9.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 26 SSIYSMCE*IYKCQCSF 76
S + +MC Y+ +CSF
Sbjct: 408 SGLIAMCGMYYRDECSF 424
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 168 KHYVTLSCKSSTHFFNK 218
KHY SC+ FF +
Sbjct: 96 KHYGVYSCEGCKGFFKR 112
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,767
Number of Sequences: 336
Number of extensions: 1937
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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