Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0024
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D84296-1|BAA12303.1| 1715|Homo sapiens TPRDIII protein. 33 1.3
D84295-1|BAA12302.1| 1792|Homo sapiens possible protein TPRDII p... 33 1.3
D84294-1|BAA12301.1| 2025|Homo sapiens TPRDI protein. 33 1.3
D83327-1|BAA23666.1| 1941|Homo sapiens DCRR1 protein. 33 1.3
D83077-1|BAA11769.1| 2025|Homo sapiens TPRD protein. 33 1.3
X59617-1|CAA42180.1| 792|Homo sapiens large subunit ribonucleot... 32 2.3
X59543-1|CAA42118.1| 792|Homo sapiens M1 subunit of ribonucleot... 32 2.3
BC006498-1|AAH06498.1| 792|Homo sapiens ribonucleotide reductas... 32 2.3
AK222786-1|BAD96506.1| 792|Homo sapiens ribonucleoside-diphosph... 32 2.3
AF107045-1|AAD37491.1| 792|Homo sapiens ribonucleotide reductas... 32 2.3
BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle glycop... 30 9.1
BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle glycop... 30 9.1
BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle glycop... 30 9.1
BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle glycop... 30 9.1
>D84296-1|BAA12303.1| 1715|Homo sapiens TPRDIII protein.
Length = 1715
Score = 32.7 bits (71), Expect = 1.3
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 454 IQKTCSELIKAGLKLSIESKRKMSGSDTDVSVKRLKKEESDEDYDSSHTQQAKNEGNNRT 633
+++ CS L K LK + KRK+ + K+L +E +ED S+ KNE T
Sbjct: 443 LKQKCSSLEKLRLKEDKKLKRKIQKKE----AKKLAQERMEEDLRESN--PPKNEEQKET 496
Query: 634 TDSHQELCDLLD 669
D+ Q C LD
Sbjct: 497 VDNVQR-CQFLD 507
>D84295-1|BAA12302.1| 1792|Homo sapiens possible protein TPRDII
protein.
Length = 1792
Score = 32.7 bits (71), Expect = 1.3
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 454 IQKTCSELIKAGLKLSIESKRKMSGSDTDVSVKRLKKEESDEDYDSSHTQQAKNEGNNRT 633
+++ CS L K LK + KRK+ + K+L +E +ED S+ KNE T
Sbjct: 520 LKQKCSSLEKLRLKEDKKLKRKIQKKE----AKKLAQERMEEDLRESN--PPKNEEQKET 573
Query: 634 TDSHQELCDLLD 669
D+ Q C LD
Sbjct: 574 VDNVQR-CQFLD 584
>D84294-1|BAA12301.1| 2025|Homo sapiens TPRDI protein.
Length = 2025
Score = 32.7 bits (71), Expect = 1.3
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 454 IQKTCSELIKAGLKLSIESKRKMSGSDTDVSVKRLKKEESDEDYDSSHTQQAKNEGNNRT 633
+++ CS L K LK + KRK+ + K+L +E +ED S+ KNE T
Sbjct: 753 LKQKCSSLEKLRLKEDKKLKRKIQKKE----AKKLAQERMEEDLRESN--PPKNEEQKET 806
Query: 634 TDSHQELCDLLD 669
D+ Q C LD
Sbjct: 807 VDNVQR-CQFLD 817
>D83327-1|BAA23666.1| 1941|Homo sapiens DCRR1 protein.
Length = 1941
Score = 32.7 bits (71), Expect = 1.3
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 454 IQKTCSELIKAGLKLSIESKRKMSGSDTDVSVKRLKKEESDEDYDSSHTQQAKNEGNNRT 633
+++ CS L K LK + KRK+ + K+L +E +ED S+ KNE T
Sbjct: 669 LKQKCSSLEKLRLKEDKKLKRKIQKKE----AKKLAQERMEEDLRESN--PPKNEEQKET 722
Query: 634 TDSHQELCDLLD 669
D+ Q C LD
Sbjct: 723 VDNVQR-CQFLD 733
>D83077-1|BAA11769.1| 2025|Homo sapiens TPRD protein.
Length = 2025
Score = 32.7 bits (71), Expect = 1.3
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 454 IQKTCSELIKAGLKLSIESKRKMSGSDTDVSVKRLKKEESDEDYDSSHTQQAKNEGNNRT 633
+++ CS L K LK + KRK+ + K+L +E +ED S+ KNE T
Sbjct: 753 LKQKCSSLEKLRLKEDKKLKRKIQKKE----AKKLAQERMEEDLRESN--PPKNEEQKET 806
Query: 634 TDSHQELCDLLD 669
D+ Q C LD
Sbjct: 807 VDNVQR-CQFLD 817
>X59617-1|CAA42180.1| 792|Homo sapiens large subunit ribonucleotide
reductase protein.
Length = 792
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 100 YKDIMNATSMSSTIPTIKCEDTSPSPVALGSDGESGTYNLSVNVNLSAAMINMLTAEGTN 279
YKD N S + TIKC + V S E NL+ S A+ +T+E T
Sbjct: 407 YKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA-----SLALNMYVTSEHTY 461
Query: 280 TTLRTPEIVNDVITMTNPLDQYNY 351
+ E+ V+ N + NY
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINY 485
>X59543-1|CAA42118.1| 792|Homo sapiens M1 subunit of ribonucleotide
reductase protein.
Length = 792
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 100 YKDIMNATSMSSTIPTIKCEDTSPSPVALGSDGESGTYNLSVNVNLSAAMINMLTAEGTN 279
YKD N S + TIKC + V S E NL+ S A+ +T+E T
Sbjct: 407 YKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA-----SLALNMYVTSEHTY 461
Query: 280 TTLRTPEIVNDVITMTNPLDQYNY 351
+ E+ V+ N + NY
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINY 485
>BC006498-1|AAH06498.1| 792|Homo sapiens ribonucleotide reductase
M1 polypeptide protein.
Length = 792
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 100 YKDIMNATSMSSTIPTIKCEDTSPSPVALGSDGESGTYNLSVNVNLSAAMINMLTAEGTN 279
YKD N S + TIKC + V S E NL+ S A+ +T+E T
Sbjct: 407 YKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA-----SLALNMYVTSEHTY 461
Query: 280 TTLRTPEIVNDVITMTNPLDQYNY 351
+ E+ V+ N + NY
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINY 485
>AK222786-1|BAD96506.1| 792|Homo sapiens ribonucleoside-diphosphate
reductase M1 chain variant protein.
Length = 792
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 100 YKDIMNATSMSSTIPTIKCEDTSPSPVALGSDGESGTYNLSVNVNLSAAMINMLTAEGTN 279
YKD N S + TIKC + V S E NL+ S A+ +T+E T
Sbjct: 407 YKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA-----SLALNMYVTSEHTY 461
Query: 280 TTLRTPEIVNDVITMTNPLDQYNY 351
+ E+ V+ N + NY
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINY 485
>AF107045-1|AAD37491.1| 792|Homo sapiens ribonucleotide reductase
M1 subunit protein.
Length = 792
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 100 YKDIMNATSMSSTIPTIKCEDTSPSPVALGSDGESGTYNLSVNVNLSAAMINMLTAEGTN 279
YKD N S + TIKC + V S E NL+ S A+ +T+E T
Sbjct: 407 YKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA-----SLALNMYVTSEHTY 461
Query: 280 TTLRTPEIVNDVITMTNPLDQYNY 351
+ E+ V+ N + NY
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINY 485
>BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 535 TDVSVKRLKKEESDEDY----DSSHTQQAKNEGNNRTTDSHQELCDLLDSMYTG 684
T S R + EE D+DY ++ + + +EG++ T+ H E ++ + Y G
Sbjct: 42 TQRSYSRFQDEEDDDDYYPAGETYNGEANDDEGSSEATEGHDEDDEIYEGEYQG 95
>BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 535 TDVSVKRLKKEESDEDY----DSSHTQQAKNEGNNRTTDSHQELCDLLDSMYTG 684
T S R + EE D+DY ++ + + +EG++ T+ H E ++ + Y G
Sbjct: 42 TQRSYSRFQDEEDDDDYYPAGETYNGEANDDEGSSEATEGHDEDDEIYEGEYQG 95
>BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 535 TDVSVKRLKKEESDEDY----DSSHTQQAKNEGNNRTTDSHQELCDLLDSMYTG 684
T S R + EE D+DY ++ + + +EG++ T+ H E ++ + Y G
Sbjct: 42 TQRSYSRFQDEEDDDDYYPAGETYNGEANDDEGSSEATEGHDEDDEIYEGEYQG 95
>BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 535 TDVSVKRLKKEESDEDY----DSSHTQQAKNEGNNRTTDSHQELCDLLDSMYTG 684
T S R + EE D+DY ++ + + +EG++ T+ H E ++ + Y G
Sbjct: 42 TQRSYSRFQDEEDDDDYYPAGETYNGEANDDEGSSEATEGHDEDDEIYEGEYQG 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.309 0.125 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,079,410
Number of Sequences: 237096
Number of extensions: 1909881
Number of successful extensions: 3581
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3574
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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