Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0024
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 1.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.7
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 4.9
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 6.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 8.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 8.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 8.5
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 8.5
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 316 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 347
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 316 SNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 347
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 54 SYQNKIK*KNNKTGSLQGYNERNEHELYYTDN 149
S N + N + YN+ N ++LYY N
Sbjct: 83 SNNNPLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 253 NMLTAEGTNTTLRTPEIVNDVITMTNPLDQYN 348
N L + N + +ND+ + N LD YN
Sbjct: 377 NDLDTKKWNNKISALRALNDLYNVKNTLDSYN 408
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 153 FNCRYSRAHARCVHYILVRSQFCCFFILFYFGN 55
F + R H V+ IL S F ++F+F +
Sbjct: 267 FEMKIKRKHNVFVNNILAASACSLFVVIFHFAH 299
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 553 RLKKEESDEDYDSSHTQ 603
R K+EES+E+Y+ H +
Sbjct: 178 RYKEEESNENYNWEHKE 194
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/37 (21%), Positives = 19/37 (51%)
Frame = +1
Query: 541 VSVKRLKKEESDEDYDSSHTQQAKNEGNNRTTDSHQE 651
++ +KKE D +YD T+ + ++ ++ +E
Sbjct: 287 ITTPEIKKEVEDMEYDDIKTELSTGMNDDIPPETEEE 323
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 587 IAVTRNKPKMKGTTGRPIAIRNCVI 661
IA R +KG +G+P++I +I
Sbjct: 146 IAFDRYNVIVKGLSGKPLSINGALI 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 556 LKKEESDEDYDSSHTQQAKNE 618
++K +S DYDS++ + KN+
Sbjct: 312 IEKGQSIWDYDSTYIPKVKNK 332
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 587 IAVTRNKPKMKGTTGRPIAIRNCVI 661
IA R +KG +G+P++I +I
Sbjct: 112 IAFDRYNVIVKGLSGKPLSINGALI 136
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 587 IAVTRNKPKMKGTTGRPIAIRNCVI 661
IA R +KG +G+P++I +I
Sbjct: 22 IAFDRYNVIVKGLSGKPLSINGALI 46
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.309 0.125 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,572
Number of Sequences: 438
Number of extensions: 3666
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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