Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0020
(696 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 350 2e-95
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 345 8e-94
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 310 2e-83
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 246 3e-64
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 241 1e-62
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 224 1e-57
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 203 4e-51
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 190 4e-47
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 167 3e-40
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 164 2e-39
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 157 2e-37
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 157 2e-37
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 155 1e-36
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 154 2e-36
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 153 5e-36
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 141 2e-32
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 137 3e-31
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 130 4e-29
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 119 8e-26
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 112 7e-24
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 111 2e-23
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 111 2e-23
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 69 3e-22
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 101 1e-20
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 101 1e-20
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 101 2e-20
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 93 4e-18
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 93 4e-18
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 93 8e-18
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 90 4e-17
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 90 6e-17
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 90 6e-17
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 86 9e-16
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 86 9e-16
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 85 1e-15
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 85 2e-15
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 83 5e-15
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 80 6e-14
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 79 1e-13
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 73 9e-12
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 71 4e-11
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 70 6e-11
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 67 4e-10
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 66 6e-10
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 66 1e-09
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 65 1e-09
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 64 2e-09
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 64 4e-09
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 62 1e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30; ... 61 2e-08
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 59 9e-08
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 56 6e-07
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 56 6e-07
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 51 2e-05
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 46 7e-04
UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila melanogaster... 39 0.13
UniRef50_Q08XA8 Cluster: Secretion protein HlyD, putative; n=2; ... 36 0.72
UniRef50_Q22AV5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.95
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 35 1.7
UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.7
UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.7
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 35 2.2
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 35 2.2
UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;... 33 5.1
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 5.1
UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI0000F1F0E1 Cluster: PREDICTED: hypothetical protein;... 33 8.8
UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;... 33 8.8
UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;... 33 8.8
UniRef50_A3S1A6 Cluster: Putative 4-amino-4-deoxy-L-arabinose tr... 33 8.8
UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella ... 33 8.8
UniRef50_Q5BC61 Cluster: Putative uncharacterized protein; n=2; ... 33 8.8
UniRef50_A7EUH2 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 8.8
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 350 bits (861), Expect = 2e-95
Identities = 163/211 (77%), Positives = 189/211 (89%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 242
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 243 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
SPFS+GLV++QV+D+G+I+ PE+LDI E L
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETL 211
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 345 bits (847), Expect = 8e-94
Identities = 161/214 (75%), Positives = 190/214 (88%), Gaps = 3/214 (1%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 242
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 243 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
MRKAI+ HL+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL---LNM 593
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGASEATL LNM
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNM 180
Query: 594 LNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
LNISPFSYGL+++QVYD+G++++PE+LDI + L
Sbjct: 181 LNISPFSYGLIIQQVYDNGSVYSPEVLDITEDAL 214
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 310 bits (761), Expect = 2e-83
Identities = 140/211 (66%), Positives = 177/211 (83%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 242
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 243 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
+RKA++ HL+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGASEATLL ML I
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKI 180
Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
PF+YGL + QVYDSG++FAP ILDI +DL
Sbjct: 181 FPFTYGLKIVQVYDSGSVFAPSILDITEDDL 211
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 246 bits (603), Expect = 3e-64
Identities = 118/213 (55%), Positives = 158/213 (74%), Gaps = 2/213 (0%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 242
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 243 MRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAP 416
M+++++ H +N N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 417 LSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 596
+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 597 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
I PFSYGLVV+ VYD+G++F+PE+LD+ + L
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQL 213
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 241 bits (590), Expect = 1e-62
Identities = 117/208 (56%), Positives = 154/208 (74%), Gaps = 2/208 (0%)
Frame = +3
Query: 78 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 257
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 258 KDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 431
+ H D N A LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 432 PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPF 611
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PF
Sbjct: 127 QPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPF 186
Query: 612 SYGLVVKQVYDSGTIFAPEILDIKPEDL 695
SYGLVV+ VYD+G++F PE+L++ +DL
Sbjct: 187 SYGLVVESVYDNGSVFNPEVLNLTEDDL 214
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 224 bits (548), Expect = 1e-57
Identities = 105/211 (49%), Positives = 148/211 (70%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 242
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 243 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
+RKAIK+ + P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL L I
Sbjct: 128 VIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKI 187
Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
+PF YG V+ VYD+G ++ + LD+ D+
Sbjct: 188 NPFKYGAVIDVVYDNGIVYDAKALDLTESDI 218
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 203 bits (495), Expect = 4e-51
Identities = 105/212 (49%), Positives = 139/212 (65%), Gaps = 1/212 (0%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 242
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 243 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPGAIAPL 419
+R A+K +L P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 420 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 599
V IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV AS ATLL N
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFN 180
Query: 600 ISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
++P SYG+ V+ VYD G I+ ++LDI ED+
Sbjct: 181 MNP-SYGVDVRTVYDDGVIYDAKVLDITDEDI 211
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 190 bits (462), Expect = 4e-47
Identities = 93/194 (47%), Positives = 127/194 (65%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 269
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 270 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 449
D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 450 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV 629
+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGASEATLL LNI PF+YGL
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEP 188
Query: 630 KQVYDSGTIFAPEI 671
K +YD+G ++P I
Sbjct: 189 KIIYDAGACYSPSI 202
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 167 bits (405), Expect = 3e-40
Identities = 87/229 (37%), Positives = 139/229 (60%), Gaps = 18/229 (7%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGS-SIVLMGKNT 239
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 240 MMRKAIKDHLDNN-----------------PALEKLLPHIKGNVGFVFTRGDLVEVRDKL 368
+++ A++ + P +E L+ +KGN+G +FT DL +++D +
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 369 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILK 548
+ +APAR G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIIT 180
Query: 549 PGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
G+KVG++EA LL LNI+PFSY L V V+D+G ++ P +LDI E +
Sbjct: 181 EGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGVLDITSESI 229
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 164 bits (399), Expect = 2e-39
Identities = 88/214 (41%), Positives = 130/214 (60%), Gaps = 17/214 (7%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 269
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 270 DN-----------------NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPAR 398
P LE L+P ++GNV +F ++ EV + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 399 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEA 578
G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SEA
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEA 182
Query: 579 TLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 680
LL L + PFS+GL VK VYD+G++++ E+L +
Sbjct: 183 VLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLKL 216
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 157 bits (382), Expect = 2e-37
Identities = 87/201 (43%), Positives = 121/201 (60%)
Frame = +3
Query: 78 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 257
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 258 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 437
+ LD++ L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI
Sbjct: 69 -NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEP 126
Query: 438 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 617
T GP++ F+ AL I TKI+KG IEI+N V+++K GD V S ATLL L I PF Y
Sbjct: 127 MLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFY 186
Query: 618 GLVVKQVYDSGTIFAPEILDI 680
+ +YD G I+ +L+I
Sbjct: 187 AMSALNLYDDGEIYDAAVLEI 207
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 157 bits (382), Expect = 2e-37
Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 18/229 (7%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGSSIVLMGKNT 239
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 240 MMRKAIKDHLDNNPA-----------------LEKLLPHIKGNVGFVFTRGDLVEVRDKL 368
+ +K + + P L+ L + G VGF+FT + +++ +
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 369 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILK 548
ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +LK
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLK 180
Query: 549 PGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
G KVG S+A LL L PF YG+ V YD+G+I + + + D+
Sbjct: 181 TGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDI 229
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 155 bits (375), Expect = 1e-36
Identities = 82/211 (38%), Positives = 129/211 (61%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 242
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 243 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
+R+AI D P L + +KG+V FVF +G+ +++ + EN +A A+ G +A
Sbjct: 85 IRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRD 142
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKVG S+A LL MLNI
Sbjct: 143 VWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNI 202
Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
PF Y + + Q+Y+ G I+ ++DI ED+
Sbjct: 203 KPFCYKMTMHQIYEDGVIYDSSLIDIGEEDI 233
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 154 bits (374), Expect = 2e-36
Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 9/206 (4%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 269
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 270 DNNPA--LEKLLPH-------IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
++ A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V S ATLL L+I
Sbjct: 128 VIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDI 187
Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDI 680
SPF Y + V+ V+D G +F E L I
Sbjct: 188 SPFYYQVEVQSVWDRGMLFLREDLSI 213
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 153 bits (370), Expect = 5e-36
Identities = 85/220 (38%), Positives = 122/220 (55%), Gaps = 16/220 (7%)
Frame = +3
Query: 75 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 254
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 255 IK---------DHLD-------NNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 386
++ D P L L+PH+K + +VF + ++ K+ V
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 387 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 566
APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V + G K+G
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIG 186
Query: 567 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 686
SE +LL +NI PFSYG+ YD+G I E+L I P
Sbjct: 187 NSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISP 226
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 141 bits (341), Expect = 2e-32
Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI-VLMGKNTMMRKAIKDH 266
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
+ P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 447 GLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 626
+ P AL+I KI KGTIEI + ++ G KVGASEA +LN+L I PF Y L
Sbjct: 131 SMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLK 190
Query: 627 VKQVYDSGTIFAPEILDIKPEDL 695
++ +YD G ++ P IL I E L
Sbjct: 191 IEALYDHGNMYDPSILAITEEVL 213
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 137 bits (331), Expect = 3e-31
Identities = 68/196 (34%), Positives = 114/196 (58%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 269
KS F K L ++ + +V +N+ S+Q+++ + L +SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 270 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 449
N+ ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 450 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV 629
+ P+ FQ+L+IPTKI KG IEII + +L+ G K+ +EATLL LNI PF + +
Sbjct: 129 ISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKI 188
Query: 630 KQVYDSGTIFAPEILD 677
Y++G + P +L+
Sbjct: 189 ISFYENGKSYDPSVLN 204
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 130 bits (313), Expect = 4e-29
Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 3/208 (1%)
Frame = +3
Query: 66 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG-SSIVLMGKNT 239
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 240 MMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPL 419
+MR A+++ LD P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP
Sbjct: 72 LMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPE 131
Query: 420 SVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 596
+V+P T P S Q +P +I G + I D ++K G+++ A +L L
Sbjct: 132 DIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKL 191
Query: 597 NISPFSYGLVVKQVYDSGTIFAPEILDI 680
I P G+ + + GT+F + L I
Sbjct: 192 EIEPMEVGVDIVAIVAEGTLFERDDLAI 219
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 119 bits (286), Expect = 8e-26
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Frame = +3
Query: 81 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNTMMRKAI 257
A WK ++ +L+ YP +V ++ + + Q+R +R ++ + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 258 KDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 431
K P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 432 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
PA T L P QAL IP +I KG + I D +LK G+ + A +LN L I P
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQP 184
Query: 609 FSYGLVVKQVYDSGTIFAPEILDIKPED 692
GL V VY+ G ++ P++L I ++
Sbjct: 185 LEVGLDVLAVYEDGIVYTPDVLAIDEQE 212
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 112 bits (270), Expect = 7e-24
Identities = 62/186 (33%), Positives = 97/186 (52%)
Frame = -2
Query: 680 DVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*N 501
D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T N
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGN 180
Query: 500 LGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLNEVSAGEHEA 321
LG + +SLEER L W GV G N D WGN T + WS + V D+ + GE E
Sbjct: 181 LGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDET 240
Query: 320 NVALDVWQQFLEGWIVVQVVFDGFAHHCVFSHEHDTGXXXXXXXXXXXXXXHVIGTHDET 141
NV LD QQ W V D + H V +H+ ++ H++ T++E
Sbjct: 241 NVTLDERQQLFVVWEVRDETSDSSSDHGVLTHQDNSSASQVLSDFVHLLGRHIVNTNNED 300
Query: 140 FWVLVQ 123
V Q
Sbjct: 301 RLVFFQ 306
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 111 bits (267), Expect = 2e-23
Identities = 59/196 (30%), Positives = 105/196 (53%)
Frame = +3
Query: 108 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 287
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 288 EKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 467
+ ++ N+G +FT +L + + + + + G IA +++I L P +T
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQT 130
Query: 468 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 647
FFQAL IPT+ISK +IEII D+ ++ + S+ LL L+I P YG+ +K+++ S
Sbjct: 131 PFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSS 190
Query: 648 GTIFAPEILDIKPEDL 695
+IL + +L
Sbjct: 191 KGEINLKILQMNNNNL 206
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 111 bits (266), Expect = 2e-23
Identities = 57/208 (27%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Frame = +3
Query: 72 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 251
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 252 AIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 431
A+++ D L+ L +++G VG V T + + +L +K AP G +AP +V+
Sbjct: 70 ALEEAGD---GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVV 126
Query: 432 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
P +TG+ P Q + +I +G+I++++D + + G+ V + +L+ L I P
Sbjct: 127 PEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEP 186
Query: 609 FSYGLVVKQVYDSGTIFAPEILDIKPED 692
GL ++ V+ G +F PE L+I ++
Sbjct: 187 KEVGLDLRGVFSEGVLFTPEELEIDVDE 214
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 68.9 bits (161), Expect(2) = 3e-22
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +3
Query: 246 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 383
++AI+ HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 59.3 bits (137), Expect(2) = 3e-22
Identities = 40/72 (55%), Positives = 45/72 (62%)
Frame = +3
Query: 480 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 659
ALSIP KISKGTIEIINDV ILK GDK ++QVY G+IF
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDK----------------------IEQVY--GSIF 773
Query: 660 APEILDIKPEDL 695
+P+ILDIKPEDL
Sbjct: 774 SPDILDIKPEDL 785
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 101 bits (243), Expect = 1e-20
Identities = 61/139 (43%), Positives = 72/139 (51%)
Frame = -3
Query: 517 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 338
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 337 RVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMSTILEPRSEXXXXXXXCEPTLS 158
V TKPTLPL GN+FS++G + LMAL +VF P+ T P + E TLS
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLS 120
Query: 157 APTMKHFGYSSKSWMILTK 101
PT YSSK + L K
Sbjct: 121 TPTTNKDLYSSKYSLNLAK 139
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 101 bits (243), Expect = 1e-20
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 3/207 (1%)
Frame = +3
Query: 81 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 260
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 261 DHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 434
+ + NP KL+ ++ V T + ++ L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 435 AHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPF 611
+ +TG+ P S +A+ IP I KG I I D + K GD + A +L+ L I P
Sbjct: 131 SGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLSALGIKPV 190
Query: 612 SYGLVVKQVYDSGTIFAPEILDIKPED 692
+ GL V VY+ G I+ ++L I E+
Sbjct: 191 TVGLNVLGVYEEGVIYTSDVLRIDEEE 217
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 101 bits (241), Expect = 2e-20
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 1/205 (0%)
Frame = +3
Query: 81 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 260
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 261 DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAH 440
+ + +E L +++G VFT+ + ++ L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 441 NTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 617
+T P Q + IP KI KG+I + +D I+ G+++ + A +L L I P
Sbjct: 123 DTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEV 182
Query: 618 GLVVKQVYDSGTIFAPEILDIKPED 692
G+ + V + TI+ ++L I E+
Sbjct: 183 GIDLLAVCEGDTIYTADVLAIDEEE 207
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 93.5 bits (222), Expect = 4e-18
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 266
WK ++ +L+ ++ I + + + Q R LRG +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALR-R 79
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
+ + ++ ++ G GF+FT + ++ +++N V+ A+PG + +++PA NT
Sbjct: 80 IYGDSVNAEIEKYLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNT 139
Query: 447 GLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
G+ P S F L IPT+I G I + D + KPGD V A LL ++N+ P L
Sbjct: 140 GINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVKPVYESL 199
Query: 624 VVKQV 638
VK V
Sbjct: 200 KVKAV 204
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 93.5 bits (222), Expect = 4e-18
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 266
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNE- 69
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
L + A L H +G +FT + ++ L + K + A+PG AP +VIP T
Sbjct: 70 LGGSVAT--LNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 447 GLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
P Q + IP I G ++I ++K G+ + A L L + P GL
Sbjct: 128 SFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGL 187
Query: 624 VVKQVYDSGTIFAPEILDIKPE 689
+++ Y TIF P++L I E
Sbjct: 188 ILQAAYYRETIFTPDLLAIDEE 209
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 92.7 bits (220), Expect = 8e-18
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Frame = +3
Query: 147 IVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGF 326
+V +++ + Q+ +R LR S K+ + RKA+ + P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 327 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 500
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 501 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 680
I +GTI I+ D +K G+ +G A LL L+I P + ++ + G I++ E L +
Sbjct: 134 IDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVIALESALEEGVIYSREDLAV 193
Query: 681 KPE 689
E
Sbjct: 194 DVE 196
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 90.2 bits (214), Expect = 4e-17
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 3/206 (1%)
Frame = +3
Query: 81 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 260
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 261 DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPA 437
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 NA---GIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 438 HNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPF 611
+TG+ GP S F L + TK+ G + ++ D + KPGD + A +L L I P
Sbjct: 130 GDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPV 188
Query: 612 SYGLVVKQVYDSGTIFAPEILDIKPE 689
L +K Y G + E L + E
Sbjct: 189 YVKLKIKVAYHEGLVIPAESLKLDLE 214
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 89.8 bits (213), Expect = 6e-17
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 4/202 (1%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 269
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 270 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 449
+ P ++ ++ KG V +FT ++ L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 450 L--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
+ GP T F +A IPTKI +GTI I D + G+ + A +L L+I P G+
Sbjct: 130 IAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLDIKPVEAGI 188
Query: 624 VVKQVYDSGTIFAPE--ILDIK 683
+ + G +A E I+D++
Sbjct: 189 TLFTALEDGLKYAEEEMIIDVE 210
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 89.8 bits (213), Expect = 6e-17
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGS-SIVLMGKNTMMRKAIKDH 266
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
+E + H++G +FT + E+ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 447 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
G+ P S F L IPT++ +G+I I D + KPGD + A LL+ L + P L
Sbjct: 134 GIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLGLKPIESKL 193
Query: 624 VVKQVYDSGTIFAPEILDI 680
+K +Y G + +P+ +++
Sbjct: 194 QIKTIYLDGKVVSPKDVEL 212
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 85.8 bits (203), Expect = 9e-16
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 266
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 447 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
L P Q L IP+ I G + + ++ G+ V A +L L I P + GL
Sbjct: 126 SLRPGPVVGELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVSPELADMLAKLEIYPITEGL 185
Query: 624 VVKQVYDSG--TIFAPEILDI 680
+ VYDSG +F+ ++L +
Sbjct: 186 DLCAVYDSGESVLFSSDVLHV 206
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 85.8 bits (203), Expect = 9e-16
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 266
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
++ P + + L + +FT ++ L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 447 GLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
P Q+ IP I G + + + K G+ V AT+L+ L I P GL
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGL 190
Query: 624 VVKQVYDSGTIFAPEILDI 680
++ YD GTI+ PE+L +
Sbjct: 191 DLRAAYDDGTIYEPELLAV 209
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 85.4 bits (202), Expect = 1e-15
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 266
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
+ E+LL G +FT + E+ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 447 GLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
GL P S F L IPT+I +I I D + KPGD + A+LL L+I+ +
Sbjct: 132 GLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKI 191
Query: 624 VVKQVYDSGTIFAPE--ILDIK 683
+K YD G I + +LD++
Sbjct: 192 NIKAAYDHGIIILRDQLVLDLE 213
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 84.6 bits (200), Expect = 2e-15
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Frame = +3
Query: 117 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKL 296
+LL +YP F+ + S+ + + R LR ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 297 LPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSF 473
++G VGF FT + EV + EN V+ A+PG AP +V+PA T P S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISK 146
Query: 474 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
F L IPT++ +G I I D + K G ++ A +L ++ I P
Sbjct: 147 FGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEP 191
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 83.4 bits (197), Expect = 5e-15
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Frame = +3
Query: 108 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 287
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+ D L +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGDYL- 75
Query: 288 EKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 467
KL ++ + + + + + + KV +P +P ++P+ VV+ T + P
Sbjct: 76 -KLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPL 134
Query: 468 -SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 644
+ Q +P I KG + + ++K G+ V A L L+I P GL VK + D
Sbjct: 135 MAELQMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLD 194
Query: 645 SGTIFAPEILDIKPE 689
SG I PE L I E
Sbjct: 195 SGVILTPETLAIDTE 209
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 79.8 bits (188), Expect = 6e-14
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Frame = +3
Query: 54 LSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGS-SIVLMG 230
+S RE WK ++ + L E ++ + + + R R + +
Sbjct: 8 VSTYHREKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVI 67
Query: 231 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAI 410
KN ++RKA + P +++ + G+ F+FT + ++ K+ + + APA+PG +
Sbjct: 68 KNNLVRKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDV 125
Query: 411 APLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 587
A +V+PA +TGL P S F L I T + GTI I D + KPGD + A+LL
Sbjct: 126 AQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLL 185
Query: 588 NMLNISPFSYGLVVKQVY 641
L I+P + +K Y
Sbjct: 186 QKLGITPMELKMKIKGAY 203
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 78.6 bits (185), Expect = 1e-13
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 266
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
L ++L ++ G + V+T + ++ L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 447 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
P FQ + IP I G + I + ++K G+K+ A A L L I P GL
Sbjct: 135 SFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISAKLAEALTRLEIMPIDVGL 194
Query: 624 VVKQVYDSGTIFAPEILDIKPEDL 695
+ + ++ PE L + EDL
Sbjct: 195 NLMAAVEGHMLYKPEDLGM-DEDL 217
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 72.5 bits (170), Expect = 9e-12
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 266
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
L ++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 447 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 623
P Q+ IP I G + I V + K GD + A +L ++ I P GL
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVITPKVAEVLKLMEIYPKLVGL 190
Query: 624 VVKQVYDSGTIFAPEILDIKPE 689
++ Y +F E L + E
Sbjct: 191 ELRAAYSDRLVFTAEDLAVDTE 212
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 70.5 bits (165), Expect = 4e-11
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Frame = +3
Query: 18 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 197
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 198 SLRGSSIVLMGKNTMMRKAIKDHLDNNPALE--KLLPHIKGNVGFVFTRGDLVEVRDKLL 371
S++G + + MGKN +MR A+ + + + +L +KG G +FT +VR L
Sbjct: 69 SMKGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALA 128
Query: 372 ENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSF-----FQALSIPTKISKGTIEIINDV 536
AR G +A ++VIP L +K SF + L +PT + I ++ D
Sbjct: 129 SVARPCLARGGDVATKTIVIP--QGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDH 186
Query: 537 HILKPGDKVGASEATLL 587
+ K GD + +++A LL
Sbjct: 187 VLCKEGDVLTSAQARLL 203
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 69.7 bits (163), Expect = 6e-11
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 3/190 (1%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI--KD 263
K +I + L++Y + N+ + +QQIR G S + +G N +M AI +
Sbjct: 23 KDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLGNNKVMMIAIGRDE 82
Query: 264 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 443
L KL P + G G +FT EV++ AR G A S+V+
Sbjct: 83 ESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTGQTATESLVLKGGP 142
Query: 444 TGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 620
P L +P K+ +G I ++ D + +PGD + A A LL + + +
Sbjct: 143 LPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPGDTLSAEAAQLLKLFGVQSAKFK 202
Query: 621 LVVKQVYDSG 650
+ + + SG
Sbjct: 203 MDLTAHWTSG 212
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 66.9 bits (156), Expect = 4e-10
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Frame = +3
Query: 147 IVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGF 326
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 327 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 500
+ T ++ ++ +E+KV P + G IAP +VIP T + GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTK 142
Query: 501 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 608
++ G IEI+ D ++K G+ V A +L L I P
Sbjct: 143 VTSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKP 178
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 66.5 bits (155), Expect = 6e-10
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Frame = +3
Query: 87 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD- 263
WK+ ++ +L ++ + +Q++R L +++ K ++ +A+K
Sbjct: 17 WKTLMLRELEELFSKHRVVLFADLTGTPTFVVQRVRKKLWKKYPMMVAKKRIILRAMKAA 76
Query: 264 --HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 437
LD+N L+ L ++G + VF G+ ++ ++ + KV P +PG A + IP
Sbjct: 77 GLELDDN-LLDDL---VRGQMLLVFADGNPFKIVKEVEKEKVAMPVKPGDKAETEIRIPE 132
Query: 438 HNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 614
T L P S F L I ++ G I I + + KPGD + A LL L I P
Sbjct: 133 GMTNLTPGPILSVFGKLRIQYQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIE 192
Query: 615 YGLVVKQVYDSGTIFAPEIL 674
G+ VK D G + ++L
Sbjct: 193 KGVRVKFAIDGGVLITEDLL 212
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 65.7 bits (153), Expect = 1e-09
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Frame = +3
Query: 36 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 215
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 216 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 389
+ GKN +M+ + + P L KL + G VG +FT EV +
Sbjct: 65 RFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVE 124
Query: 390 PARPGAIAPLSVVIPAHN-TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 566
AR G +A +V +PA ++L +PTK+ KG + + +D + + G +
Sbjct: 125 YARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLT 184
Query: 567 ASEATLLNMLNISPFSYGLVVK 632
+A +L ++ + L +K
Sbjct: 185 PEQARILKLVGKPMAKFRLTMK 206
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 65.3 bits (152), Expect = 1e-09
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Frame = +3
Query: 36 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 215
R +L+++ ++ K T K+N ++ +D+Y FI N+ S + IR + +S
Sbjct: 6 RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64
Query: 216 IVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 389
GKN ++ A+ + A L K +KG G +FT EV + E +
Sbjct: 65 RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEED 124
Query: 390 PARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 566
AR G +A +VV+P + + L +PTK+ KG I + + K G+ +
Sbjct: 125 YARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLT 184
Query: 567 ASEATLLNMLNISPFSYGLVVK 632
+A +L + + L+ K
Sbjct: 185 VEQAKILKHFEVKMSQFRLIFK 206
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 64.5 bits (150), Expect = 2e-09
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 3/216 (1%)
Frame = +3
Query: 15 CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 194
C + K R +L+R R+ K ++ + +D Y FI N+ + +++ +R
Sbjct: 6 CAMPKSKRDRKVSLTRTPRKGLEA-KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVR 64
Query: 195 ISLRGSSIVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 368
+ + S I GKN +M A+ + + L ++ H++G VG +FT EV +
Sbjct: 65 NAWKHSRI-FFGKNKVMMVALGREPSSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWF 123
Query: 369 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHIL 545
K AR G A +V + P + L +PT + KG + +++D +
Sbjct: 124 SSFKEVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVC 183
Query: 546 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 653
K GD + +A +L + + + +K +++S T
Sbjct: 184 KEGDILTPEQARVLKLFGYEMAEFKVTIKFLWNSET 219
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 63.7 bits (148), Expect = 4e-09
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 5/184 (2%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI-KDH 266
K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N + A+ K H
Sbjct: 17 KKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTH 75
Query: 267 LDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 443
D+ P L L ++KG +FT+ E+R++L + RPGA A +V I +
Sbjct: 76 KDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGP 135
Query: 444 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI--SPFS 614
P + L +P K+ +G + + D + D + + +L + I S F
Sbjct: 136 LPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSEDVLSPEQCRILKLFQIEMSEFR 195
Query: 615 YGLV 626
GL+
Sbjct: 196 VGLL 199
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +3
Query: 168 GSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRG 341
G + + R S +V + K + + + H + NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 342 DLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 452
DL EV ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +3
Query: 213 SIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 392
S+ M K+++ +A K NP L+P + GNVG +FT+GDL E +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKT---GNPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 393 ARPGAIAPLSVVIPAHNTGL 452
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +3
Query: 276 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 452
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30;
Metazoa|Rep: mRNA turnover protein 4 homolog - Homo
sapiens (Human)
Length = 239
Score = 61.3 bits (142), Expect = 2e-08
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +3
Query: 90 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 257
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 258 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 437
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 438 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 614
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 615 YGLVVKQVYDSGTIFAPEILDIKPE 689
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 59.3 bits (137), Expect = 9e-08
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Frame = +3
Query: 27 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 206
K RS TL++ ++ K+ F + Q LD + +I N+ + +++IR +
Sbjct: 3 KSRRSKVLTLAQTEKKGHEG-KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWK 61
Query: 207 GSSIVLMGKNTMMRKAI-----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLL 371
GS I MGK +M KA+ ++H +N L KLL G VG +FT EV
Sbjct: 62 GSRI-FMGKTKVMAKALGHTPEEEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YF 116
Query: 372 ENKVQAP-ARPGAIAPLSVVIPA----HNTGLGPEKTSFF---------QALSIPTKISK 509
E+ VQ AR GA+AP + VIPA G P + + L +PT +
Sbjct: 117 ESFVQNDFARAGAVAPFTHVIPAGPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKN 176
Query: 510 GTIEIINDVHILKPGDKVGASEATLLNMLNI--SPFSYGLV 626
G + ++ D + G ++ + + LL + I + F GL+
Sbjct: 177 GVVTLLADFPLCTEGQQLDSRQTRLLKLFGITAAEFKVGLL 217
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 56.4 bits (130), Expect = 6e-07
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Frame = +3
Query: 27 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 206
K R+ +L++ ++D+ WKS ++ L E ++ +N+ + +++R +
Sbjct: 3 KSKRAKVVSLTQTKKKDRE-WKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATE 61
Query: 207 GSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 380
++ +G N ++R A+ ++ + L +KG+ G +FT +V
Sbjct: 62 ATTTFFVGSNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFA 121
Query: 381 VQAPARPGAIAPLSVVI---PAHN-TGLGPEKT--SFFQALSIPTKISKGTIEIINDVHI 542
V+ AR GA+A +V + P H +G E T + +PTK+++G IE+ + +
Sbjct: 122 VKDYARTGALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVIELEANHTL 181
Query: 543 LKPGDKVGASEATLLNM 593
K G + A LL +
Sbjct: 182 CKEGQHISPQGAILLRL 198
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 56.4 bits (130), Expect = 6e-07
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +3
Query: 27 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 206
K R+ L+++ ++++ K F I + + Y CF+ DN+ + ++ +R L
Sbjct: 3 KSKRAKVYNLTQVTKKNREQ-KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELN 61
Query: 207 GSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 380
I GK + +A+ ++ A L+KL ++ G+VG +FT D E++D +
Sbjct: 62 DCRI-FFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLT 120
Query: 381 VQAPARPGAIAPLSVVIPA 437
AR G++A ++ IP+
Sbjct: 121 QVDFARAGSVATRTITIPS 139
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 51.2 bits (117), Expect = 2e-05
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Frame = +3
Query: 27 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 206
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 207 GSSIVLMGKNTMMRKAIKD--HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 380
G+ GK +M KA+ + + L ++ +KG +G FT + E +
Sbjct: 63 GTGRFFFGKGKVMAKALGETPETEYQDGLSQIAKRLKGQIGLFFTSHPVDETVEWFDSWH 122
Query: 381 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSF----------------FQALSIPTKISKG 512
AR GA + + + +PA GP T F +AL + T + +G
Sbjct: 123 KPEYARMGAKSTMDITLPA-----GPLLTPFTEPPSGDPFPHSMEPQLRALGLTTSLVRG 177
Query: 513 TIEIINDVHIL-KPGDKVGASEATLLNMLNI 602
I +N+ H+L G+K+ + + +L +L I
Sbjct: 178 -IPSLNNPHVLCVKGEKLSSEKCRILKLLAI 207
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 47.6 bits (108), Expect = 3e-04
Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Frame = +3
Query: 36 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 215
R+ +L+R ++ K K+N K+ EYP +I+G ++ + ++++R +GS
Sbjct: 6 RAKVVSLTRTDKKTKED-KANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKGSK 64
Query: 216 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 389
I GK ++ A+ + + + + + G+VG +FT EV D + +
Sbjct: 65 I-FFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVD 123
Query: 390 PARPGAIAPLSVVIPAH--NTGLGPEKT------SFFQALSIPTKISKGTIEIINDVHIL 545
AR G+ A ++ +P P T + L +PT++ +G ++ + +
Sbjct: 124 FARGGSKATETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNYVVC 183
Query: 546 KPGDKVGASEATLLNMLNISPFSYGLV 626
K G + +++A +L + + ++ L+
Sbjct: 184 KEGQTLTSNQAQILKHILVHMAAFRLI 210
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 46.4 bits (105), Expect = 7e-04
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = -3
Query: 475 KKEVFSGPR--PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 302
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 301 GNSFSRAG--LLSRWSLMALRIIVFFPMSTILEPRS 200
G + G + S SLM I F +S I +PR+
Sbjct: 66 GTRLRKTGFPVFSARSLMD-NNISFRKISIIFKPRT 100
>UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila
melanogaster|Rep: CG3557-PA - Drosophila melanogaster
(Fruit fly)
Length = 271
Score = 38.7 bits (86), Expect = 0.13
Identities = 29/78 (37%), Positives = 40/78 (51%)
Frame = +1
Query: 157 PITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSP 336
P A + CS S S P S +W C+KPS T +P+R CC + +A L CSP
Sbjct: 77 PAPCAPSPCS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKPTR-CCASPKAPLVPCSP 131
Query: 337 AETSLRSVTNCWRTKSKL 390
+T S C++T S+L
Sbjct: 132 MDTPKSS---CFKTASRL 146
>UniRef50_Q08XA8 Cluster: Secretion protein HlyD, putative; n=2;
Cystobacterineae|Rep: Secretion protein HlyD, putative -
Stigmatella aurantiaca DW4/3-1
Length = 395
Score = 36.3 bits (80), Expect = 0.72
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 333 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKG 512
T+ VEV ++ K +A RPGA+ L A G K+ F A ++ +K +G
Sbjct: 283 TQSRTVEVLADIIPGKAEATLRPGALVELDFAAAAAEGDDG--KSLFLPAQAVSSKGQQG 340
Query: 513 TIEIINDVHILKPGDKV 563
+ ++ D +LK KV
Sbjct: 341 YVWVVQDGRVLKRDVKV 357
>UniRef50_Q22AV5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 232
Score = 35.9 bits (79), Expect = 0.95
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 27 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 206
K RS L+++ ++D K K+ + + +Y ++ +N+ + ++I+
Sbjct: 3 KSKRSKVVALTKV-KKDATGHKQKIQNKLNECVQKYDNIYVFSHENMTTIPFREIQAQWS 61
Query: 207 GSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKL 368
S L GKN +M+ + D+ L L IKG+ G +FT EV+ +L
Sbjct: 62 DSRFFL-GKNKVMQIVLGKDSDSEQLDNLHYLTEQIKGDCGLLFTNKTYEEVKKQL 116
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 35.1 bits (77), Expect = 1.7
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Frame = -3
Query: 664 GAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLMISIVPFEI-LVGI 488
G ++ +Y LT YE GE +N SEA LSP +++ + + +I +
Sbjct: 178 GTLMLLNNYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRIAARIPDKLPQAQIDRLNA 237
Query: 487 ERAWKKEVFSGPRPVLWAGMTTDNGAMAPGR--AGAWTLFSNSLSRTSTRSPRVNTKPT 317
A K V S P + A + G + PGR A TL + V PT
Sbjct: 238 MAAQKAAVASDPSIQVLA-LPFRKGEIVPGRHQRVALTLTEKETQQLLAACKNVKATPT 295
>UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 115
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 231 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 347
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 69 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 106
>UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 367
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 231 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 347
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 321 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 358
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 34.7 bits (76), Expect = 2.2
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Frame = +3
Query: 195 ISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDK 365
I L + L+ + ++ L N AL+KL LPH ++GN+GF+ + + ++ D
Sbjct: 372 IGLLQKLVYLLLSANQLSGSVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDL 431
Query: 366 LLENKVQAPARPGAIAPLSV----VIPAHN--TGLGPEKTSFFQALSI 491
+L++ A P + LS I HN G PEK S +L +
Sbjct: 432 ILDHNSFVGALPDHLGNLSARLISFIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 117 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGS--SIVLMGKNTMMRKAIKDHLD 272
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H D
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQHSD 219
>UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 170
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 247 AKPSKTTWTTIQPSRNCCHTSRATLASCSP---AETSLRSVTNCWRTKS 384
A T WTT + T+ AT A+ + A ++ ++TN WRTKS
Sbjct: 102 ASTISTRWTTTAATTTTTATTAATTAAAATSTSASNAISTITNAWRTKS 150
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 264 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 359
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 418
Score = 33.5 bits (73), Expect = 5.1
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 24 LKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRIS- 200
+K ++PYA L+ + DKA + + +++LL YP +V D + + I+
Sbjct: 295 IKQAKTPYAALAHQFKTDKAKYDDSSMGLLVKLLGIYPPGTVVQLDTGQFALVISVNINK 354
Query: 201 LRGSSIVLMGKNTMMRKAIKDHLDNNPALE 290
L ++++ + +A+ L+ NP L+
Sbjct: 355 LLAPNVLIYDSSIPKEQAVILDLNENPELK 384
>UniRef50_UPI0000F1F0E1 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 491
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 446
+ NNP + L +++GN+G++ V+V + ++ K++ A P PL + + ++
Sbjct: 307 VSNNPEGKWLARNLRGNIGYI--SNSCVDVDYEEVKRKIRGQAAPPFSPPLGLPVNDDSS 364
Query: 447 GLGPEKTSFF 476
P +SF+
Sbjct: 365 SNDPMDSSFY 374
>UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;
n=1; Aspergillus niger|Rep: hypothetical protein
An18g01440 - Aspergillus niger
Length = 693
Score = 32.7 bits (71), Expect = 8.8
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = -3
Query: 526 MISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTST 347
+ S++P + WKKE+FS P + G T + + P +W+ + SLS T+T
Sbjct: 338 VFSLIPQHGKYAYKATWKKEIFSSPFEKV--GETVSSTFLDPVVPSSWS-GNRSLSNTTT 394
Query: 346 RSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMSTILEPR 203
P + L C G S + + ++ ++++ T+ PR
Sbjct: 395 FDPSGAPRMIARLWCKVPPIDPGKASSFQIFSI-LLIWTVNVTLATPR 441
>UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;
Enterobacteriaceae|Rep: Putative fimbrial adhesin
protein - Escherichia coli
Length = 174
Score = 32.7 bits (71), Expect = 8.8
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +3
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 587
+ PLS A T LGP+ T L KIS+G E++ D + G V +
Sbjct: 10 LLPLSFSSFAATTDLGPKGT-----LKFTLKISQGACELVKDSVEVDMGTAVLKKPVRIG 64
Query: 588 NMLNISPFSYGL 623
+N +PFS GL
Sbjct: 65 TEINPTPFSIGL 76
>UniRef50_A3S1A6 Cluster: Putative 4-amino-4-deoxy-L-arabinose
transferase and related glycosyltransferase of PMT
family protein; n=1; Prochlorococcus marinus str. MIT
9211|Rep: Putative 4-amino-4-deoxy-L-arabinose
transferase and related glycosyltransferase of PMT
family protein - Prochlorococcus marinus str. MIT 9211
Length = 555
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +3
Query: 201 LRGSSIVLMG--KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEV 356
LR +++ L+G +NT +R ++ +L N +K L +KGN F+ ++ L+E+
Sbjct: 479 LRSNTVYLIGVNRNTKVRTLMEFYLPNYQDYQKSLDQVKGNSYFMVSKDALLEL 532
>UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 934
Score = 32.7 bits (71), Expect = 8.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 194 YLATWLQYRAHGKKHNDAQSHQRPPGQQSSP 286
+ TWLQ+ HN Q HQ+PP + P
Sbjct: 149 HAVTWLQWEEIKALHNSEQPHQKPPARSMRP 179
>UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 545
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +3
Query: 390 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 569
P++PGA+ L ++ + G P +F+ + S+PT +I++ H+L + +
Sbjct: 264 PSQPGALPALPTLLAPNPDGSKPMLVNFYPSGSVPTTPVTFASQILSSNHVLLGRNLAAS 323
Query: 570 SEATLLNM 593
S A ++++
Sbjct: 324 SGARVISI 331
>UniRef50_Q5BC61 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 389
Score = 32.7 bits (71), Expect = 8.8
Identities = 31/108 (28%), Positives = 47/108 (43%)
Frame = +3
Query: 99 YFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNN 278
Y + ++L YP + A Q++Q+ R SLR ++ L R H +N
Sbjct: 244 YLSEALELAYSYPSPLVTAAIPDLYQRVQETRHSLREATATLRACTNRDR-----HSHSN 298
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
+LE L N+ LV +RD LLE +A +RP + LS
Sbjct: 299 QSLESLTGDSGPNLLLQGAEQTLVVLRD-LLERLARAASRPEGSSALS 345
>UniRef50_A7EUH2 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 272
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 200 ATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLRV 331
+TW ++A GK N+A + + PG+ P E + WLR+
Sbjct: 63 STWRTFKAVGKSENNAINFENRPGKLKKPSENTRI-PSRSWLRI 105
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,805,663
Number of Sequences: 1657284
Number of extensions: 17149155
Number of successful extensions: 52269
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 49853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52208
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -