Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0020
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    25   3.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   5.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.2  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   9.2  

>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 225 MGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 329
           M +NT ++ A+  HL NNP  ++ L  +K  V  V
Sbjct: 102 MFQNTTLQ-AVLSHLRNNPITDEHLAKVKRGVEIV 135


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 167 GLATDAADPYLATWLQYRAHGKKHNDAQSHQR 262
           G ATD  +  LA   Q + H  +H   Q HQ+
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQ 324


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 212 QYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQ 310
           Q + H ++     SHQ+   Q  S +    THQ
Sbjct: 249 QQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQ 281


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 212 QYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQ 310
           Q + H ++     SHQ+   Q  S +    THQ
Sbjct: 249 QQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQ 281


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 212 QYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQ 310
           Q + H ++     SHQ+   Q  S +    THQ
Sbjct: 201 QQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQ 233


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 369 TVCHGPQRGLRG*TRSQRCP*CVATVSRGLDC 274
           T+C G   G+    ++Q C  C A V  GL+C
Sbjct: 12  TLC-GEVTGVSYRGQAQTCRNCAAPVHHGLNC 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,545
Number of Sequences: 2352
Number of extensions: 16253
Number of successful extensions: 49
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)