Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0019
(517 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 27 0.28
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 26 0.87
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 25 1.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 1.5
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 24 2.6
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 24 2.6
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 24 2.6
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 24 2.6
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 24 2.6
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 4.6
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 4.6
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 6.1
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 6.1
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 23 8.1
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 8.1
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 27.5 bits (58), Expect = 0.28
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 208 PPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP 309
PP IP P P G PP G RPP
Sbjct: 86 PPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 25.8 bits (54), Expect = 0.87
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 229 PSEPNQEPPNYGEQDRFPPNHNGYR-PPNGQN 321
P Q+ PN Q PP H G + PPN QN
Sbjct: 195 PPGVTQQQPNMMHQQP-PPLHQGQQAPPNSQN 225
Score = 25.0 bits (52), Expect = 1.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 178 GQFGVNQQRPPPNHEQIP--SEPNQEPPN 258
G GV QQ+P H+Q P + Q PPN
Sbjct: 194 GPPGVTQQQPNMMHQQPPPLHQGQQAPPN 222
Score = 24.6 bits (51), Expect = 2.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 205 PPPNHEQIPSEPNQEPPNYGEQDRFPPN 288
PP +Q P+ +Q+PP + + PPN
Sbjct: 195 PPGVTQQQPNMMHQQPPPLHQGQQAPPN 222
Score = 23.8 bits (49), Expect = 3.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 199 QRPPPNHEQIPSEPNQEPPNYGEQDRFPP 285
Q+PPP H+ + PN + + G Q P
Sbjct: 208 QQPPPLHQGQQAPPNSQNASSGLQSPLYP 236
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 101 PLRIPVISPPLHSLTTNRTKITDFFSHG 18
P +P+++P SL TN T +HG
Sbjct: 189 PAPVPIVTPVPRSLRTNNVLNTSIPNHG 216
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.0 bits (52), Expect = 1.5
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 202 RPPP-NHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP 309
RPPP H+Q P + PN G PP RPP
Sbjct: 163 RPPPIAHQQAPFAMDPARPNPG----MPPGPQMMRPP 195
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 2.6
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -3
Query: 185 NCPCTLKLKACDSPPRTAPCT 123
NC CT C +P A C+
Sbjct: 17 NCECTTDTTGCKAPSNDAVCS 37
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 2.6
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -3
Query: 185 NCPCTLKLKACDSPPRTAPCT 123
NC CT C +P A C+
Sbjct: 17 NCECTTDTTGCKAPSNDAVCS 37
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 2.6
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -3
Query: 185 NCPCTLKLKACDSPPRTAPCT 123
NC CT C +P A C+
Sbjct: 17 NCECTTDTTGCKAPSNDAVCS 37
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 2.6
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -3
Query: 185 NCPCTLKLKACDSPPRTAPCT 123
NC CT C +P A C+
Sbjct: 17 NCECTTDTTGCKAPSNDAVCS 37
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 24.2 bits (50), Expect = 2.6
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -3
Query: 185 NCPCTLKLKACDSPPRTAPCT 123
NC CT C +P A C+
Sbjct: 593 NCECTTDTTGCKAPSNDAVCS 613
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.4 bits (48), Expect = 4.6
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = +1
Query: 178 GQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNGY 327
G+ G Q P + +P P E + D+ G P G GY
Sbjct: 435 GEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGY 484
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 23.4 bits (48), Expect = 4.6
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 229 PSEPNQ--EPPNYGEQDRFPPNHNGYRPPNGQNG 324
P E Q E P Q + PP G+ P G G
Sbjct: 698 PGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKG 731
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.0 bits (47), Expect = 6.1
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 196 QQRPPPNHEQIPSEPNQEP-PNYGEQD 273
Q +P HE IP EP QEP Y E++
Sbjct: 1034 QLKPLKLHE-IPEEPPQEPLKEYTEEE 1059
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.0 bits (47), Expect = 6.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 226 IPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
IP P Q+P + ++ G +PP G G
Sbjct: 2980 IPPAPEQQPVRHQQRPSLISMLTGVQPPGGFPG 3012
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +1
Query: 193 NQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNG 297
NQ+ N +P + Q P + + ++P NG
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNG 282
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 313 RSEVCIRCGWVG 278
R +CIRCG VG
Sbjct: 681 RQNMCIRCGVVG 692
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,902
Number of Sequences: 2352
Number of extensions: 11076
Number of successful extensions: 36
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -