Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0018
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 64 1e-10
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 64 1e-10
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 50 2e-06
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 44 2e-04
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 42 4e-04
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 42 6e-04
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 40 0.002
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 38 0.006
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 37 0.018
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 34 0.097
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 31 0.90
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 31 0.90
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 31 1.2
SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2) 30 1.6
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 29 2.8
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 29 4.8
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 6.4
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 8.4
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +3
Query: 39 PKMSIHIKDSDDLKT-RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXX 215
P+ ++ + + D T L AG KLVV DF A+WCGPCK I P + +E
Sbjct: 5 PRGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGL-SEKYKQAVFLK 63
Query: 216 XXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 326
A++ + +MPTF F KN K+DE GA+
Sbjct: 64 IDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGAD 100
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/92 (35%), Positives = 43/92 (46%)
Frame = +3
Query: 51 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 230
I ++D + AG +LVVIDF ATWCGPCK I P ++ +
Sbjct: 11 IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKF-MDVVFLKVDVDQ 69
Query: 231 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 326
A I +MPTF F N K+DE GA+
Sbjct: 70 CQLTAESCGIRAMPTFHFYHNKAKIDELRGAD 101
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 188
+++ IDF ATWCGPC+MIGPK +E+A E
Sbjct: 11 NEVAAIDFTATWCGPCRMIGPKFEEMAKE 39
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 135 WCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEF 314
WC PCK++ P+LD I AE A + +N++PT + +K GK +++F
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKF 61
Query: 315 SG 320
G
Sbjct: 62 EG 63
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 57 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 188
I++ + + + DKLVVIDF A WCGPC+ I PK ++A E
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 129 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 308
A WC PCK++ P+LD I AE A + +N++PT + +K GK ++
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 96 AGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 275
A + V+DF A WCGPC PK +++A + SE NI+S PT
Sbjct: 449 ASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPT 508
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 3/100 (3%)
Frame = +3
Query: 9 SARDRAFV*KPKMS--IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 182
+A D A K +S +H +D + + V DF A WC PC + P+ + A
Sbjct: 270 TAHDIALFAKESVSSNVHALGPEDFPSSVTSPSRPFFV-DFFAPWCPPCMRLLPEYRKAA 328
Query: 183 AE-MXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGK 299
+ +YNI S PT + N +
Sbjct: 329 RSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQ 368
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +3
Query: 45 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 224
+S + D D + AG +++++F A WCG CK + P+ E AAE
Sbjct: 536 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAEALKKNDPPVPLA 594
Query: 225 XXXXXXA-----SEYNINSMPTFVFVKNGKKLDEFSG 320
A S+Y ++ PT +NG+ ++ G
Sbjct: 595 KVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDG 631
Score = 35.5 bits (78), Expect = 0.042
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 191
K V+I+F A WCG CK + PK +E+ ++
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKL 909
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Frame = +3
Query: 69 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM--------XXXXXXXXXXX 224
DD A K V++DF A WC CK + P ++A E+
Sbjct: 140 DDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANN 199
Query: 225 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 326
+YN+ +PT +GK ++EF G N
Sbjct: 200 MATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNN 233
Score = 31.9 bits (69), Expect = 0.52
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 191
++ V++DF A WC C+ + P D A ++
Sbjct: 68 NEYVLVDFYAPWCSDCQRLSPLFDTAALQL 97
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +3
Query: 87 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 266
+A DK V ++F A WCG CK + P D++ + ++S
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHS 456
Query: 267 MPTF-VFVKNGKKLDEFSGANVD 332
PT F K G+ +D G +D
Sbjct: 457 FPTIKYFPKEGEAVDYNGGRTLD 479
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 90 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM---XXXXXXXXXXXXXXXXXASEYNI 260
A A +K V+++F A WCG CK + P+ + A ++ ++ +
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQV 96
Query: 261 NSMPTFVFVKNGKKLDEFSG 320
PT F K+GK E++G
Sbjct: 97 QGYPTIKFFKDGKP-SEYAG 115
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +3
Query: 108 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTF-VF 284
L +++F A WCG C+ + P+ + A E+ AS Y + PT VF
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVF 158
Query: 285 ---VKNGKKLDEFSG 320
+KN ++++ G
Sbjct: 159 AAGIKNSHSVEDYQG 173
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM---XXXXXXXXXXXXXXXXXASEYNINSMP 272
+ L++++F A WCG CK + P+ ++ A E+ A +Y + P
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYP 252
Query: 273 TFVFVKNGKKLDEFSG 320
T + G K E+ G
Sbjct: 253 TLKVFRKG-KATEYKG 267
Score = 34.3 bits (75), Expect = 0.097
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 48 SIHIKDSDDLKTRLAEAGDK------LVVIDFMATWCGPCKMIGPKLDEIAAEM 191
S +K+ DD+ ++ D+ +++++F A WCG CK + P+ + A +M
Sbjct: 54 SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 45 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 188
+S + D D + AG +++++F A WCG CK + P+ E AAE
Sbjct: 11 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 99 GDKLVVIDFMATWCGPCKMIGPKLDEI--AAEMXXXXXXXXXXXXXXXXXASEYNINSMP 272
G+K +++F A WCG CK + P +++ A S +++ P
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFP 97
Query: 273 TF-VFVKNGKKLDEFSG 320
T F K +E++G
Sbjct: 98 TIKYFPKGSTTPEEYNG 114
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 34.3 bits (75), Expect = 0.097
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 87 LAEAGDKLVVIDFMATWCGPCKMIGP 164
L E+ K+ +IDF A+WC PC++ P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEM--XXXXXXXXXXXXXXXXXASEYNINSMPTFVF 284
V++ F A WCG CK PK ++ A + +N PT +
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRY 226
Query: 285 VKNGKKLDEFSGANV 329
GK + E+ G V
Sbjct: 227 YLYGKFVVEYDGDRV 241
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 78 KTRLAEAGD----KLVVIDFMATWCGPCKMIGPKLDEIAAEM 191
K L +AG+ K++ + F A WC PC+ P L + E+
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEEL 54
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 191
+++++DF A WC C + PK ++ A ++
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 188
+K+V I F A+WC PC+ P L + E
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEE 182
>SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2)
Length = 389
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 184 AAISSSLGPIILHGPHQVAMKSITTSLSPASASLVFRSSESL 59
+A SS + P++ H H V+ + ++ P S++ S E L
Sbjct: 338 SAQSSPINPVVYHDNHDVSTSGVKSATCPVCESVIHGSGEEL 379
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKLDE 176
K+V + F A WC PC+ PKL E
Sbjct: 30 KIVGLYFSAHWCPPCRGFTPKLVE 53
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 96 AGD---KLVVIDFMATWCGPCKMIGPKL 170
AGD K+V I F A WC PC+ P+L
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTPEL 195
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Frame = +3
Query: 108 LVVIDFMATWCGPCKMIGPKLD----EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 275
++++DF A WC C+ + P+L+ +AA+ + I P+
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPS 98
Query: 276 FVFVKNGKKLDEFSGANVD 332
K GK ++ G D
Sbjct: 99 VKLFKFGKYAGDYIGQRTD 117
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKL 170
K V++ F A WCG CK P+L
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPEL 234
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 39 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 182
P +H++D DD + + V++ F A WCG CK + P+ + A
Sbjct: 81 PSEVVHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKPEYVDAA 125
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 113 DELVACFRQPCLQVVGIFDVNGHLGFLYKCT 21
+EL +C R PC D+N L Y C+
Sbjct: 167 EELNSCLRSPCQNQATCLDINAGLRDAYNCS 197
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 506 KHKKLISSNSLQTLKTFFIHLLKT 435
K KL+SSNS+ LK +HLL++
Sbjct: 810 KEGKLVSSNSMSKLKQKVVHLLES 833
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,013,197
Number of Sequences: 59808
Number of extensions: 348296
Number of successful extensions: 895
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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