Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0016
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   2.4  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   2.4  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    24   5.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   7.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.7  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 13  PGCRNSARGYHESTRHSSC 69
           P CR+ A+G H    H +C
Sbjct: 76  PACRDCAKGNHTDCYHPAC 94


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 446 WVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQRMPL 568
           W ST    V   +LP  + +  ET D+       +YQR+ L
Sbjct: 174 WRSTPIRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSL 214


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 449 VSTSDSDVRCWKLPPLSTLTSETY-DQNSYNTNNVYQRMPLHNIP 580
           ++  D+D +   +PP ST +  T  D ++ +T    +R P+H  P
Sbjct: 66  ITDGDADDQVTIVPPSSTASPTTAGDGDANDTQQASKRPPVHIPP 110


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 597 LIAGPPGMLCNGI 559
           +I GPPGM+ NG+
Sbjct: 265 VIGGPPGMVNNGL 277


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 193 CLRKFGRHNKIVV 231
           CL+KF RHN + V
Sbjct: 706 CLKKFYRHNNVEV 718


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,152
Number of Sequences: 2352
Number of extensions: 16776
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)