Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0016
(729 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 24 1.7
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 23 2.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 3.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 3.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 3.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 3.9
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 3.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 3.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.2
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 6.8
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 22 6.8
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 6.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.8
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 6.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.0
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.0
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 21 9.0
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.7
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 446 WVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQRMPL 568
W T V +LP + + ET D+ +YQR+ L
Sbjct: 193 WKETPVRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSL 233
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 335 DRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIW 448
++LV + ++ VCE + L L T Q IW
Sbjct: 18 EQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIW 55
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 325 WRPRSPSHYNGITESRKLY 381
W+P +H NGI + KL+
Sbjct: 1132 WQPPPNTHSNGIIQGYKLH 1150
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 325 WRPRSPSHYNGITESRKLY 381
W+P +H NGI + KL+
Sbjct: 1128 WQPPPNTHSNGIIQGYKLH 1146
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTNNVYQ 556
K P + + S Y+ ++YN NN Q
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQ 101
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTNNVYQ 556
K P + + S Y+ ++YN NN Q
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQ 101
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTNNVYQ 556
K P + + S Y+ ++YN NN Q
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQ 101
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTNNVYQ 556
K P + + S Y+ ++YN NN Q
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQ 101
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTNNVYQ 556
K P + + S Y+ ++YN NN Q
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQ 101
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTNNVYQ 556
K P + + S Y+ ++YN NN Q
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQ 101
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 518 YDQNSYNTNNVYQRMPLHNI 577
Y+ N+YN NN Y + +NI
Sbjct: 98 YNNNNYNNNN-YNKKLYYNI 116
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 518 YDQNSYNTNNVYQRMPLHNI 577
Y+ N+YN NN Y + +NI
Sbjct: 98 YNNNNYNNNN-YNKKLYYNI 116
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 226 QFYCAVRTS*DTLSSISAYDQCFNII 149
+FY ++ S DT+SS FN+I
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFNLI 119
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 113 NCSRLMKLKGHCDNV 157
NC L K GHC+ V
Sbjct: 63 NCLSLGKAGGHCEKV 77
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 226 QFYCAVRTS*DTLSSISAYDQCFNII 149
+FY ++ S DT+SS FN+I
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFNLI 124
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTNNVYQRMPLH 571
K P + + S Y+ N+YN N Y+ PLH
Sbjct: 310 KEPKIISSLSNNYNYNNYNNN--YK--PLH 335
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 226 QFYCAVRTS*DTLSSISAYDQCFNII 149
+FY ++ S DT+SS FN+I
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFNLI 124
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 77 KEPKIISSLSNNYNYNNYNNN 97
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 77 KEPKIISSLSNNYNYNNYNNN 97
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 77 KEPKIISSLSNNYNYNNYNNN 97
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 77 KEPKIISSLSNNYNYNNYNNN 97
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 90 NNYNYNNNYNNYNKHN 105
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 310 KEPKIISSLSNNYNYNNYNNN 330
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 310 KEPKIISSLSNNYNYNNYNNN 330
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 310 KEPKIISSLSNNYNYNNYNNN 330
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 310 KEPKIISSLSNNYNYNNYNNN 330
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 482 KLPPLSTLTSETYDQNSYNTN 544
K P + + S Y+ N+YN N
Sbjct: 299 KEPKIISSLSNNYNYNNYNNN 319
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 323 NNYNYNNNYNNYNKHN 338
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 527 NSYNTNNVYQRMPLHN 574
N+YN NN Y HN
Sbjct: 323 NNYNYNNNYNNYNKHN 338
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 164 LVVSRDGTQCVSGSS 208
L R GT C SGSS
Sbjct: 9 LATPRTGTNCSSGSS 23
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,668
Number of Sequences: 438
Number of extensions: 5359
Number of successful extensions: 47
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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