Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0016
(729 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 187 8e-48
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 187 8e-48
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 70 1e-12
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 69 2e-12
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 68 6e-12
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 67 1e-11
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 66 2e-11
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 66 2e-11
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 66 3e-11
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 65 4e-11
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 64 9e-11
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 64 1e-10
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 62 4e-10
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 62 4e-10
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 61 8e-10
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 60 1e-09
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 60 1e-09
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 60 1e-09
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 60 2e-09
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 59 3e-09
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 59 3e-09
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 58 5e-09
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 58 8e-09
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 58 8e-09
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 58 8e-09
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 58 8e-09
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 58 8e-09
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 57 1e-08
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 57 1e-08
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 56 2e-08
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 56 2e-08
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 56 2e-08
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 56 3e-08
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 55 4e-08
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 55 6e-08
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 54 7e-08
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 54 7e-08
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 54 1e-07
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 53 2e-07
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 52 5e-07
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 52 5e-07
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 51 7e-07
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 51 7e-07
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 51 7e-07
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 51 7e-07
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 51 9e-07
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 50 2e-06
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 49 3e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 49 3e-06
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 49 3e-06
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 49 3e-06
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 49 3e-06
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 49 4e-06
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 49 4e-06
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 49 4e-06
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 48 6e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 48 6e-06
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 48 6e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 48 6e-06
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 48 6e-06
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 47 1e-05
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 47 1e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 47 1e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 46 2e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 46 2e-05
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 46 2e-05
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 46 3e-05
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 45 4e-05
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 45 6e-05
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 45 6e-05
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 45 6e-05
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 45 6e-05
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 44 8e-05
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 44 8e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 44 8e-05
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 44 8e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 44 8e-05
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 44 8e-05
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 44 1e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 44 1e-04
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 44 1e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 43 2e-04
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 43 2e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 43 2e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 43 2e-04
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 43 2e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 43 2e-04
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 43 2e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 43 2e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 42 3e-04
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 42 4e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 42 4e-04
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 42 4e-04
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 42 6e-04
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 42 6e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 42 6e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 41 7e-04
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 41 0.001
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 41 0.001
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 41 0.001
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 40 0.001
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 40 0.001
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 40 0.002
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 40 0.002
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 40 0.002
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 40 0.002
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 40 0.002
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 40 0.002
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 40 0.002
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 39 0.003
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 39 0.003
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 39 0.003
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 39 0.004
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 39 0.004
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 39 0.004
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 38 0.005
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 38 0.005
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 38 0.005
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 38 0.005
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 38 0.005
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 38 0.007
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 38 0.007
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 38 0.009
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 38 0.009
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 38 0.009
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 38 0.009
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 37 0.016
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 37 0.016
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 37 0.016
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 36 0.021
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 36 0.021
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.028
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 36 0.036
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 35 0.048
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 35 0.048
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 35 0.048
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 35 0.064
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 35 0.064
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 35 0.064
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 35 0.064
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 35 0.064
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 35 0.064
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 35 0.064
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 34 0.084
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 34 0.084
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 34 0.084
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 34 0.084
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 34 0.084
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 34 0.084
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 34 0.084
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 34 0.11
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 34 0.11
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 34 0.11
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 34 0.11
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 34 0.11
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 34 0.11
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.11
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.15
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 32 0.34
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.45
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 32 0.45
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 32 0.45
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 32 0.45
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.45
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 31 0.59
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 31 0.78
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 31 0.78
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 31 0.78
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 31 0.78
At5g45560.1 68418.m05595 pleckstrin homology (PH) domain-contain... 31 1.0
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 31 1.0
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 31 1.0
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 30 1.4
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 30 1.4
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.4
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 30 1.8
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 30 1.8
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 30 1.8
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 1.8
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 30 1.8
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 2.4
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 2.4
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 29 2.4
At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-contain... 29 2.4
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 29 2.4
At2g19870.1 68415.m02323 tRNA/rRNA methyltransferase (SpoU) fami... 29 2.4
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 3.2
At1g60350.1 68414.m06795 no apical meristem (NAM) protein-relate... 29 3.2
At5g13150.1 68418.m01506 exocyst subunit EXO70 family protein le... 29 4.2
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 29 4.2
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 29 4.2
At3g09300.1 68416.m01104 oxysterol-binding family protein simila... 29 4.2
At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase fa... 29 4.2
At1g33530.1 68414.m04149 F-box family protein contains F-box dom... 29 4.2
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 28 5.5
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 28 5.5
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 28 5.5
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 28 5.5
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 5.5
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 5.5
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 28 5.5
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 28 5.5
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 28 5.5
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 28 5.5
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 28 5.5
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 28 7.3
At5g26290.1 68418.m03143 meprin and TRAF homology domain-contain... 28 7.3
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 28 7.3
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 7.3
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 28 7.3
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 27 9.6
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 27 9.6
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 27 9.6
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 187 bits (455), Expect = 8e-48
Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 15/242 (6%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
MN GT+LVSG TEKVLRVWDPR S+ MKL+GH DNV+ L++ G C+SGSSD I+
Sbjct: 221 MNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIR 280
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETS 403
LW + QQRC+ T VH+++VWAL +FSHV SGGRD+ + +T+L E+ +++C +
Sbjct: 281 LWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRES-VLLCTKEH 339
Query: 404 PILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLT------SETYDQNSYNTNNV----- 550
PI +L IWV+T+DS V W S T S S+N V
Sbjct: 340 PIQQLAL--QDNSIWVATTDSSVERWPAEVQSPKTVFQRGGSFLAGNLSFNRARVSLEGL 397
Query: 551 ----YQRMPLHNIPGGPAIRHFTVLNDKRHVITKDSANNIALFDVLKACKLEDLGQVDYE 718
+ P +PG I +LN+KR ++TKD+A ++ L+D+ + +ED G++ +E
Sbjct: 398 NPAPAYKEPSITVPGTHPIVQHEILNNKRQILTKDAAGSVKLWDITRGVVVEDYGKISFE 457
Query: 719 EE 724
E+
Sbjct: 458 EK 459
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 137 KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH 316
KGH ++V AL ++ GT VSG ++ +++W +R H++ V L+ T
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 317 VISGGRDRLVIITEL 361
+SG D ++ + +L
Sbjct: 270 CLSGSSDSMIRLWDL 284
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +2
Query: 65 LVSGSTEKVLRVW----DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
L +GS + L+ W D CS + H D V ++ + T VS SSD T+K W
Sbjct: 55 LFTGSRDGTLKRWAFDEDATFCSATFE--SHVDWVNDAALAGEST-LVSCSSDTTVKTWD 111
Query: 233 -VSQQRCVSTIRVHSEAVWAL-IATDTFSHVISGGRDRLVIITEL 361
+S C T+R HS+ V L +A + V SGG V I ++
Sbjct: 112 GLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/96 (26%), Positives = 45/96 (46%)
Frame = +2
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENF 379
GSS+ S S + + H E+V+AL DT + ++SGG ++++ + + R
Sbjct: 189 GSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS 248
Query: 380 MIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
M + T + L + + +SDS +R W L
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQR--CVSTIRVHSEAV 283
+C +V VS D + +GS DGT+K W+ + C +T H + V
Sbjct: 39 NCLDVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWV 87
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 187 bits (455), Expect = 8e-48
Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 15/242 (6%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
MN GT+LVSG TEKVLRVWDPR S+ MKL+GH DNV+ L++ G C+SGSSD I+
Sbjct: 221 MNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIR 280
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETS 403
LW + QQRC+ T VH+++VWAL +FSHV SGGRD+ + +T+L E+ +++C +
Sbjct: 281 LWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRES-VLLCTKEH 339
Query: 404 PILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLT------SETYDQNSYNTNNV----- 550
PI +L IWV+T+DS V W S T S S+N V
Sbjct: 340 PIQQLAL--QDNSIWVATTDSSVERWPAEVQSPKTVFQRGGSFLAGNLSFNRARVSLEGL 397
Query: 551 ----YQRMPLHNIPGGPAIRHFTVLNDKRHVITKDSANNIALFDVLKACKLEDLGQVDYE 718
+ P +PG I +LN+KR ++TKD+A ++ L+D+ + +ED G++ +E
Sbjct: 398 NPAPAYKEPSITVPGTHPIVQHEILNNKRQILTKDAAGSVKLWDITRGVVVEDYGKISFE 457
Query: 719 EE 724
E+
Sbjct: 458 EK 459
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 137 KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH 316
KGH ++V AL ++ GT VSG ++ +++W +R H++ V L+ T
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 317 VISGGRDRLVIITEL 361
+SG D ++ + +L
Sbjct: 270 CLSGSSDSMIRLWDL 284
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +2
Query: 65 LVSGSTEKVLRVW----DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
L +GS + L+ W D CS + H D V ++ + T VS SSD T+K W
Sbjct: 55 LFTGSRDGTLKRWAFDEDATFCSATFE--SHVDWVNDAALAGEST-LVSCSSDTTVKTWD 111
Query: 233 -VSQQRCVSTIRVHSEAVWAL-IATDTFSHVISGGRDRLVIITEL 361
+S C T+R HS+ V L +A + V SGG V I ++
Sbjct: 112 GLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/96 (26%), Positives = 45/96 (46%)
Frame = +2
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENF 379
GSS+ S S + + H E+V+AL DT + ++SGG ++++ + + R
Sbjct: 189 GSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS 248
Query: 380 MIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
M + T + L + + +SDS +R W L
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQR--CVSTIRVHSEAV 283
+C +V VS D + +GS DGT+K W+ + C +T H + V
Sbjct: 39 NCLDVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWV 87
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/106 (32%), Positives = 55/106 (51%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVS 199
AG + +P + +GS++K +R+WD + + GH V +L +S DG S
Sbjct: 499 AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMAS 558
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRD 337
G DGTI +W +S RC++ + H+ VW+L + S + SG D
Sbjct: 559 GDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSAD 604
Score = 56.0 bits (129), Expect = 2e-08
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVS 199
+G + AT +PPG ++S S + +R+W + + L+ KGH V S G S
Sbjct: 418 SGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFAS 477
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVH-SEAVWALIATDTFSHVISGGRDRLVIITELRNPEN 376
S D T ++WS+ + + + + H S+ W +++ +G D+ V + +++ E
Sbjct: 478 CSHDRTARIWSMDRIQPLRIMAGHLSDVDW----HPNCNYIATGSSDKTVRLWDVQTGEC 533
Query: 377 FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLT 508
I S +L L + D + + D + W L +T
Sbjct: 534 VRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCIT 577
Score = 54.4 bits (125), Expect = 7e-08
Identities = 38/182 (20%), Positives = 71/182 (39%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+A +P G S S ++ R+W L + GH +V + +GSSD
Sbjct: 465 DAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDW---HPNCNYIATGSSDK 521
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE 394
T++LW V CV H V +L + ++ SG D +++ +L +
Sbjct: 522 TVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMG 581
Query: 395 ETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQRMPLHN 574
S + L ++ + + ++D V+ W + + LT + N + P +
Sbjct: 582 HNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKS 641
Query: 575 IP 580
P
Sbjct: 642 TP 643
Score = 34.3 bits (75), Expect = 0.084
Identities = 29/116 (25%), Positives = 45/116 (38%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
L GH V + S G +S S+D TI+LWS + + H+ VW +
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 314 HVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ S DR I + + I+ S + + + I +SD VR W
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLW 526
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 69.3 bits (162), Expect = 2e-12
Identities = 36/147 (24%), Positives = 64/147 (43%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P +GS ++ +++WD + L GH V+ L VS T S D +K
Sbjct: 179 DPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKC 238
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSP 406
W + Q + + + H V+ L T V++GGRD + + ++R ++ ++
Sbjct: 239 WDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDV 298
Query: 407 ILKLCFTADQQGIWVSTSDSDVRCWKL 487
L D Q I + DS ++ W L
Sbjct: 299 FSVLARPTDPQVI-TGSHDSTIKFWDL 324
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/100 (27%), Positives = 50/100 (50%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
++P V+++G + V RVWD R ++ L H +V +++ Q ++GS D TIK
Sbjct: 262 LHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIK 320
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRL 343
W + + ++TI H + V A+ + +S D +
Sbjct: 321 FWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNI 360
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
L+GH V+++ +GS+D TIK+W V+ T+ H V L ++ +
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 314 HVISGGRDRLV 346
++ S G D+ V
Sbjct: 226 YMFSAGDDKQV 236
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/171 (19%), Positives = 73/171 (42%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P +GS ++ +++WD + L GH + V+ L VS T S D +K
Sbjct: 185 DPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKC 244
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSP 406
W + Q + + + H V+ L T +++GGRD + + ++R + +
Sbjct: 245 WDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNT 304
Query: 407 ILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQR 559
+ + + + D+ ++ W L T+++ T+ + S ++ +
Sbjct: 305 VCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPK 355
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
++P VL++G + V RVWD R ++ L GH + V ++ Q V+GS D TIK
Sbjct: 268 LHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIK 327
Query: 224 LWSVSQQRCVSTIRVHSEAVWAL 292
W + + +ST+ H ++V A+
Sbjct: 328 FWDLRYGKTMSTLTHHKKSVRAM 350
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/118 (22%), Positives = 48/118 (40%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
++GH V+++ +GS+D TIK+W V+ T+ H E V L ++ +
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 314 HVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
++ S G D+ V +L + S + L + DS R W +
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+VS S +K L++WD S + L GH + + + VSGS D T+++W V+
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENF-MIVCEETSPILKLC 421
+C+ + HS+ V A+ S ++S D L I + ++ +E P+ +
Sbjct: 146 KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVR 205
Query: 422 FTADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNS 532
F+ + + I V T D+ +R W + L + T N+
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNA 242
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
NP ++VSGS ++ +R+WD L L H D V A+ +RDG+ VS S DG ++
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 227 WSVSQQRCVSTI 262
W CV T+
Sbjct: 182 WDSGTGHCVKTL 193
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVW------DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
G +L S S +K +R + DP + + GH + + + S D VS S D T
Sbjct: 36 GRLLASASADKTIRTYTINTINDPI-AEPVQEFTGHENGISDVAFSSDARFIVSASDDKT 94
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEE 397
+KLW V + T+ H+ + + + ++SG D V I ++ + ++
Sbjct: 95 LKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAH 154
Query: 398 TSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ P+ + F D I S+ D R W
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDN---VKALVVSRDGTQCVSGSSDGT 217
+P G ++ G+ + LR+W+ + L GH + + + +G + VSGS D
Sbjct: 207 SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNC 266
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
+ +W ++ ++ + + H+E V + T + + SG D+ V I
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G +VSGS + + +W+ + L KL+GH + V + SGS D T+++W+
Sbjct: 255 GKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQ 314
Query: 236 SQQ 244
++
Sbjct: 315 KKE 317
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+++ S +K +++W + S L +GH +V DGTQ VS +DG +KLW+V+
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
C++T H + VWAL + +GG D ++
Sbjct: 616 ECIATYDQHEDKVWALAVGKKTEMIATGGGDAVI 649
Score = 47.6 bits (108), Expect = 8e-06
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Frame = +2
Query: 35 EATMNPPGTVL-VSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDG-TQCVSGSS 208
+ ++ G VL V+GS +K +R+W+ + S + GH ++ A+ ++ + VSGS
Sbjct: 408 DTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSG 467
Query: 209 DGTIKLWS---VSQQ-------RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITE 358
D T+K+WS +S+ + S + H + + ++ S V +G DR I
Sbjct: 468 DRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWR 527
Query: 359 LRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTL 505
L + + + + I + F+ Q + ++ D V+ W + S L
Sbjct: 528 LPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCL 576
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/141 (19%), Positives = 59/141 (41%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+++ +GS ++ +W + ++ LKGH + ++ S ++ S D T+K+W++S
Sbjct: 512 SLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAIS 571
Query: 239 QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKL 418
C+ T H+ +V + +S G D L+ + + E + + L
Sbjct: 572 DGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWAL 631
Query: 419 CFTADQQGIWVSTSDSDVRCW 481
+ I D+ + W
Sbjct: 632 AVGKKTEMIATGGGDAVINLW 652
Score = 46.4 bits (105), Expect = 2e-05
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Frame = +2
Query: 68 VSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL---VVSRDGTQCVSGSSDGTIKLWSVS 238
V+ + E+V RV+D S L GH + V +L V S V+GS D T++LW+ +
Sbjct: 376 VATNLEEV-RVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT 434
Query: 239 QQRCVSTIRVHSEAVWAL-IATDTFSHVISGGRDRLVIITEL-------RNPENF---MI 385
+ C+ H+ + A+ A +FS +SG DR + + L P N +
Sbjct: 435 SKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSV 494
Query: 386 VCEETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPL 496
V I + + + + D W+LP L
Sbjct: 495 VAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDL 531
Score = 46.0 bits (104), Expect = 3e-05
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 7/167 (4%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
++P +L S + +RVWD + KGH V + G + +D +
Sbjct: 68 LSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVL 127
Query: 224 LWSVSQQRCVSTIRVHSEAVWA-LIATDTFSHV-ISGGRDRLVIITEL--RNPEN--FMI 385
+W V C R H V + L D+ ++ ISG D V + +L +N E I
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAI 187
Query: 386 VCEETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLS-TLTSETYD 523
+ + S + + + D ++ + D V W L S T TY+
Sbjct: 188 MEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYE 234
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Frame = +2
Query: 89 VLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRV 268
V+ + D + S ++G D + AL +S D S I++W + +C+ + +
Sbjct: 41 VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKG 100
Query: 269 HSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTAD-QQGI 445
H V + + + + G DR V++ ++ + + F D + I
Sbjct: 101 HEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNI 160
Query: 446 WVSTS-DSDVRCWKLPPLST 502
+S S D+ VR W L +T
Sbjct: 161 LISGSDDATVRVWDLNAKNT 180
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/150 (24%), Positives = 68/150 (45%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
++++G++ V+++WD + GH N A+ G SGSSD +K+W + +
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ C+ T + HS + + T V+SGG D +V + +L + PI L
Sbjct: 132 KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLD 191
Query: 422 FTADQQGIWVSTSDSDVRCWKLPPLSTLTS 511
F + + ++D V+ W L + S
Sbjct: 192 FHPLEFLLATGSADRTVKFWDLETFELIGS 221
Score = 58.0 bits (134), Expect = 6e-09
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P G L SGS++ L++WD R + KGH + + + DG VSG D +K+
Sbjct: 109 HPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKV 168
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSP 406
W ++ + + + H + +L + +G DR V +L E E +
Sbjct: 169 WDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATG 228
Query: 407 ILKLCFTADQQGIWVSTSDS-DVRCWK 484
+ + F D + ++ DS V W+
Sbjct: 229 VRSIKFHPDGRTLFCGLDDSLKVYSWE 255
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/142 (22%), Positives = 57/142 (40%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+ ++G + + +W + LM L GH V ++ ++G+S G IKLW V +
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ V H A+ + SG D + I ++R + I +
Sbjct: 90 AKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIR 149
Query: 422 FTADQQGIWVSTSDSDVRCWKL 487
FT D + + D+ V+ W L
Sbjct: 150 FTPDGRWVVSGGLDNVVKVWDL 171
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G +L S S +K + +W N S + + +GH + L S D S S D T+++W
Sbjct: 55 GNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDA 114
Query: 236 -SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPIL 412
S C+ +R H+ V+ + + ++SG D + I E++ + ++ + PI
Sbjct: 115 RSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPIS 174
Query: 413 KLCFTADQQGIWVSTSDSDVRCW 481
+ F D I ++ D + W
Sbjct: 175 SVHFNRDGSLIVSASHDGSCKIW 197
Score = 60.9 bits (141), Expect = 8e-10
Identities = 23/72 (31%), Positives = 43/72 (59%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
NPP ++VSGS ++ +R+W+ + + +K H + ++ +RDG+ VS S DG+ K+
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 227 WSVSQQRCVSTI 262
W + C+ T+
Sbjct: 197 WDAKEGTCLKTL 208
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +2
Query: 71 SGSTEKVLRVWDPRNCSRLMK-LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQR 247
S S + LR+WD R+ +K L+GH + V + + VSGS D TI++W V +
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 248 CVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC-F 424
CV I+ HS + ++ S ++S D I + + + ++ SP + F
Sbjct: 162 CVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKF 221
Query: 425 TADQQGIWVSTSDSDVR 475
+ + + I V+T DS ++
Sbjct: 222 SPNGKFILVATLDSTLK 238
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Frame = +2
Query: 125 LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATD 304
L L+GH + + S DG S S D T+ LWS + + HS + L +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 305 TFSHVISGGRDRLVIITELRNP-ENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ S D + I + R+P E ++ T+ + + F I + D +R W
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 482 KL 487
++
Sbjct: 156 EV 157
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 2 LVDPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVS-- 175
L+D ++ + A +P G ++ + + L++ + L GH + V + +
Sbjct: 208 LIDDKSPAVSF-AKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFS 266
Query: 176 -RDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGG 331
+G VSGS D + LW + + + + H++AV ++ + + S G
Sbjct: 267 VTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSG 319
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/98 (31%), Positives = 51/98 (52%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N G++L SGS + + +WD S L +L+GH D V LV G + VS S D +++
Sbjct: 115 NKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRV 174
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDR 340
W + Q C+ + H VW++ +V++G D+
Sbjct: 175 WDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQ 212
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/158 (21%), Positives = 71/158 (44%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+++ G + +R+WD + + H V AL ++ G+ SGS D I LW V
Sbjct: 77 SLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVV 136
Query: 239 QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKL 418
+ + +R H + V L+ D ++S +D+ + + +L IV S + +
Sbjct: 137 GESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSV 196
Query: 419 CFTADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNS 532
+++ + ++D ++R + + S+ S D N+
Sbjct: 197 DTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDSNA 234
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/118 (24%), Positives = 52/118 (44%)
Frame = +2
Query: 128 MKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDT 307
+ L GH V + +S DG V+GS D +K+W + C +I H ++V +
Sbjct: 576 LSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRN 635
Query: 308 FSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
++ S G+DRLV + E+ + + + I L + + + D +R W
Sbjct: 636 THYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L S +++++ WD L+ L+GH + L +S G V+GS D +++ W S++
Sbjct: 639 LFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEE 698
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G LVS S +K LRVWD + + GH V ++ + V+GS+D ++ ++V
Sbjct: 160 GKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
Query: 236 SQ 241
+
Sbjct: 220 KE 221
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/151 (15%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Frame = +2
Query: 68 VSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW------ 229
+ G+ VL + D + +++ ++K H + ++ + + V+ S+D +K W
Sbjct: 461 IVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQ 520
Query: 230 ---SVSQQRCVSTIR--VHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE 394
+++ VS ++ ++ V A+ + H+ D V + + + + ++ +
Sbjct: 521 KSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYG 580
Query: 395 ETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
P++ + ++D + I + D +++ W L
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGL 611
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 64.1 bits (149), Expect = 9e-11
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPR-NCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
NP GT++ SGS ++ + +W +C M LKGH + + L + DG+Q VS S D T++
Sbjct: 62 NPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVR 121
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSH-VISGGRDRLVIITELRNPENFMIVCEET 400
W V + + + HS V + T +ISG D + ++R + +
Sbjct: 122 AWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ-RGAIQTFPDK 180
Query: 401 SPILKLCFTADQQGIWVSTSDSDVRCWKL 487
I + F+ I+ D+DV+ W L
Sbjct: 181 YQITAVSFSDAADKIFTGGVDNDVKVWDL 209
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV--- 235
+ +G + ++VWD R M L+GH D + + +S DG+ ++ D + +W +
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPY 254
Query: 236 -SQQRCVSTIRVHSEAVWALIATDTFS----HVISGGRDRLVIITELRNPENFMIVCEET 400
Q RCV H + ++S V +G DR+V I + + + T
Sbjct: 255 APQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHT 314
Query: 401 SPILKLCFTADQQGIWVSTSDSDV 472
+ + F + I +SD ++
Sbjct: 315 GSVNECVFHPTEPIIGSCSSDKNI 338
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWDPRNCS---RLMKL-KGHCDNVKALVV----SRDGTQCV 196
+++P G+ L++ + L VWD R + R +K+ +GH N + ++ S DGT+
Sbjct: 229 SLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVT 288
Query: 197 SGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
+GSSD + +W + +R + + H+ +V + T + S D+ + + E+
Sbjct: 289 AGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +2
Query: 125 LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV-SQQRCVSTIRVHSEAVWALIAT 301
+M L GH V + + GT SGS D I LW V + ++ H A+ L T
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 302 DTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTS-DSDVRC 478
S ++S D+ V ++ + + E +S + C T + +S S D +
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 479 WKL 487
W +
Sbjct: 166 WDM 168
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+ + +P GT + +GS+++++ +WD + + KL GH +V V S SSD
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Query: 215 TIKLWSV 235
I L +
Sbjct: 337 NIYLGEI 343
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/141 (27%), Positives = 69/141 (48%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+VSGS + + VWD + L +LKGH D+ + V G + ++ + DGT+K+W V
Sbjct: 912 IVSGSDDLSVIVWDKQTTQLLEELKGH-DSQVSCVKMLSGERVLTAAHDGTVKMWDVRTD 970
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCF 424
CV+T+ S A+ +L D+ + + GRD + I ++R+ + + T I +
Sbjct: 971 MCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRM 1030
Query: 425 TADQQGIWVSTSDSDVRCWKL 487
D + + D R W +
Sbjct: 1031 VEDT--LITGSDDWTARVWSV 1049
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/95 (27%), Positives = 52/95 (54%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+L + + V +WD R+ ++ KLKGH ++++ + D ++GS D T ++WSVS+
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVED--TLITGSDDWTARVWSVSR 1051
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
C + + H+ V ++ + +I+G D L+
Sbjct: 1052 GSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLL 1086
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Frame = +2
Query: 68 VSGSTEKVLRVWDP--RNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+SGST+ ++++WDP R LKGH V+A +S D + VSGS D ++ +W
Sbjct: 871 ISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRA--ISSDRGKIVSGSDDLSVIVWDKQT 928
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ + ++ H V + + + V++ D V + ++R V +S IL L
Sbjct: 929 TQLLEELKGHDSQV-SCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLE 987
Query: 422 FTADQQGIWVSTS-DSDVRCWKL 487
+ D GI + D+ W +
Sbjct: 988 YD-DSTGILAAAGRDTVANIWDI 1009
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L++GS + RVW S L H V+++ S ++GS+DG ++ W +
Sbjct: 1035 LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEG 1094
Query: 245 --RCVSTIRVHSEAVWALIATDTF 310
+CV I +HS ++ ++ A + +
Sbjct: 1095 GIKCVKNITLHSSSILSINAGENW 1118
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/150 (22%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGH---CDNVKALVVSRDGTQCVSGSSDGTI 220
P G ++ +GS + L VW+P+ C + +KGH + + L ++ + + +SGS DG++
Sbjct: 207 PDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSV 266
Query: 221 KLWSVSQQRCVSTIRVHSEAVWAL---IATDTFSHVISGGRDRLVIITELRNPENFMIVC 391
+ ++ + VS++ H+++V + ++ T +GG D+ +II +L++ +C
Sbjct: 267 HIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQH-STPRFIC 325
Query: 392 EETSPILKLCFTADQQGIWVSTSDSDVRCW 481
E + L + + + ++ V W
Sbjct: 326 EHEEGVTSLTWIGTSKYLATGCANGTVSIW 355
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +2
Query: 2 LVDPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRD 181
++D AGI +P G ++++GS + L +W+ + L GH NV + D
Sbjct: 150 VLDGPGAGIEW-VRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPD 208
Query: 182 GTQCVSGSSDGTIKLWSVSQQRCVSTIR---VHSEAVWALIATDTFSHVISGGRDRLVII 352
G +GS D ++ +W+ + ++ H+E + L S ISG +D V I
Sbjct: 209 GKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHI 268
Query: 353 TEL 361
+
Sbjct: 269 VNI 271
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = +2
Query: 71 SGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRC 250
+G +K L +WD ++ + + H + V +L +G ++GT+ +W C
Sbjct: 304 TGGMDKKLIIWDLQHSTPRFICE-HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNC 362
Query: 251 VSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPEN 376
V T H +AV A+ + ++S D + E +N
Sbjct: 363 VHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQN 404
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
T++ +G + +W N +L GH D+V L S DG SG DG ++++ S
Sbjct: 84 TLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDAS 143
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
L +G + +WD + + GH D V+A+ VS + VS S D T +++ S+
Sbjct: 343 LATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSE 401
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +2
Query: 140 GHCDNVKALVVS-RDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH 316
GH + AL S D T +G D LW + + + H ++V L +
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQL 127
Query: 317 VISGGRDRLVII 352
+ SGG D +V I
Sbjct: 128 LASGGLDGVVQI 139
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 62.1 bits (144), Expect = 4e-10
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS--VS 238
+ S S +K L++W + +K H D V A+ VS +GT +GS+D I++W+
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTG 266
Query: 239 QQR--CVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIV----CEET 400
++R V+T+ H AV AL D S + SG DR +++ E + N+M V
Sbjct: 267 EKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHD 326
Query: 401 SPILKLCFTADQQGIWVSTSDSDVRCWKLPPLST 502
IL L +D + ++D VR W+ P S+
Sbjct: 327 KAILSLFNVSDL--LLSGSADRTVRIWRRGPDSS 358
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVI 322
H D V AL VS DG S S D T+K+W S RC +I+ H +AV A IA T V
Sbjct: 194 HADAVTALAVS-DGF-IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNA-IAVSTNGTVY 250
Query: 323 SGGRDRLV 346
+G DR +
Sbjct: 251 TGSADRRI 258
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQ--CVSGSSDGT 217
+N G+VL SGS ++ + VW+ + S M ++G ++S +SGS+D T
Sbjct: 288 LNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSDLLLSGSADRT 347
Query: 218 IKLW---SVSQQRCVSTIRVHSEAVWALIAT-----DTFSHVISGGRD 337
+++W S C+ + H++ V +L A D +ISG D
Sbjct: 348 VRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLD 395
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Frame = +2
Query: 62 VLVSGSTEKVLRVW---DPRNCSRLMKLKGHCDNVKALVVSR-----DGTQCVSGSSDGT 217
+L+SGS ++ +R+W + S L L GH VK+L R D +SGS DG
Sbjct: 338 LLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGE 397
Query: 218 IKLWSVS 238
+K W VS
Sbjct: 398 VKCWKVS 404
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 60.9 bits (141), Expect = 8e-10
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKG--------HCDNVKALVVSRDGTQC 193
A +P G L S S + + VWD + L+ H D V + SRD
Sbjct: 219 ARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEML 278
Query: 194 VSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPE 373
SGS DG IK+W + C+ HS+ V +L + S ++S D+ I L++ +
Sbjct: 279 ASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGK 338
Query: 374 NFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
TS + FT+D I ++SD V+ W
Sbjct: 339 LLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVW 374
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/104 (25%), Positives = 49/104 (47%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+L SGS + +++W R + + H V +L SRDG+Q +S S D T ++ +
Sbjct: 277 MLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKS 336
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPE 373
+ + R H+ V I T S +I+ D V + + + +
Sbjct: 337 GKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 380
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G+ L+S S ++ R+ ++ L + +GH V + + DG++ ++ SSD T+K+W
Sbjct: 317 GSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDS 376
Query: 236 SQQRCVSTIR 265
C+ T +
Sbjct: 377 KTTDCLQTFK 386
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL-VVSRDGTQCVSGSSDGTIKLWSVSQ 241
+ S + E V++VWD + ++K H V ++ S D T SGS DG++KLWS++Q
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ TI+ + ++T + G D V +LRNP+ + +
Sbjct: 609 GVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYV 668
Query: 422 FTADQQGIWVSTSDSDVRCWKL 487
D + S++D+ ++ W L
Sbjct: 669 RFVDSSTLVSSSTDNTLKLWDL 690
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/51 (21%), Positives = 30/51 (58%)
Frame = +2
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRD 337
+Q S + +G +++W V++ + V+ ++ H + VW++ + +++ G D
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSD 597
Score = 31.5 bits (68), Expect = 0.59
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR-LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G L GS + + +D RN L + GH V + V D + VS S+D T+KLW
Sbjct: 631 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTV-SYVRFVDSSTLVSSSTDNTLKLWD 689
Query: 233 VS 238
+S
Sbjct: 690 LS 691
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL-VVSRDGTQCVSGSSDGTIKLWSVSQ 241
+ S + E V++VWD + ++K H V ++ S D T SGS DG++KLWS++Q
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ TI+ + ++T + G D V +LRNP+ + +
Sbjct: 609 GVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYV 668
Query: 422 FTADQQGIWVSTSDSDVRCWKL 487
D + S++D+ ++ W L
Sbjct: 669 RFVDSSTLVSSSTDNTLKLWDL 690
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/51 (21%), Positives = 30/51 (58%)
Frame = +2
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRD 337
+Q S + +G +++W V++ + V+ ++ H + VW++ + +++ G D
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSD 597
Score = 31.5 bits (68), Expect = 0.59
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR-LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G L GS + + +D RN L + GH V + V D + VS S+D T+KLW
Sbjct: 631 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTV-SYVRFVDSSTLVSSSTDNTLKLWD 689
Query: 233 VS 238
+S
Sbjct: 690 LS 691
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 60.1 bits (139), Expect = 1e-09
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N ++++G++ V+++WD + GH N A+ G SGSSD +++
Sbjct: 16 NSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV 75
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENF-MIVCEETS 403
W ++ C+ T + H+ + + + V+SGG D +V + +L + C E
Sbjct: 76 WDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHE-G 134
Query: 404 PILKLCFTADQQGIWVSTSDSDVRCWKL 487
PI L F + + ++D V+ W L
Sbjct: 135 PIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P G +VSG + V++VWD L + K H +++L +GS+D T+K
Sbjct: 100 SPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKF 159
Query: 227 WSVSQQRCVSTIRVHSEAVWAL 292
W + + T R + V A+
Sbjct: 160 WDLETFELIGTTRPEATGVRAI 181
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/120 (22%), Positives = 48/120 (40%)
Frame = +2
Query: 128 MKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDT 307
M L GH V ++ + + ++G+S G IKLW + + + V H A+
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 308 FSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ SG D + + + R T I + F+ D + + D+ V+ W L
Sbjct: 61 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 120
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P +L +GS ++ ++ WD + + V+A+ DG G DG +K+
Sbjct: 142 HPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG-LKV 200
Query: 227 WS 232
+S
Sbjct: 201 YS 202
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/143 (23%), Positives = 70/143 (48%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P G L + S +K R+WD + L+ +GH +V + +DG S D ++
Sbjct: 348 HPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARV 407
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSP 406
W + R + + H + V+++ + H+ SGG D I +LR ++ I+ +
Sbjct: 408 WDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Query: 407 ILKLCFTADQQGIWVSTSDSDVR 475
+ ++ + Q+G +++T+ D++
Sbjct: 468 VSQVKY-EPQEGYFLATASYDMK 489
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/151 (19%), Positives = 60/151 (39%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+ +P L + S ++ ++W + L +GH D + + G + S D
Sbjct: 303 DVVFSPVDDCLATASADRTAKLWKTDG-TLLQTFEGHLDRLARVAFHPSGKYLGTTSYDK 361
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE 394
T +LW ++ + HS +V+ + + S G D L + +LR + ++
Sbjct: 362 TWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQG 421
Query: 395 ETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
P+ + F+ + + D+ R W L
Sbjct: 422 HIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 11 PRAAGIRHEATMNPP-GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGT 187
P A + + P G L + S + + +W R+ S + L GH V +L ++ D +
Sbjct: 462 PAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSS 521
Query: 188 QCVSGSSDGTIKLWSVS 238
+ S D TIKLW+ S
Sbjct: 522 CIATVSHDRTIKLWTSS 538
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
G +L + S V ++W+ P+ + + LK H + +V S + S+D T KLW
Sbjct: 267 GKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLW 325
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/157 (22%), Positives = 66/157 (42%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
T + ++ +G+ +++WD + L GH N ++ G SGS D +
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 221 KLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEET 400
K+W + ++ C+ T + H+ V L T V+SGG D +V + +L +
Sbjct: 126 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 401 SPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTS 511
I L F + + ++D V+ W L + S
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/149 (22%), Positives = 61/149 (40%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
VLV+G + + +W + ++ L GH + ++ +G++ GTIKLW + +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ V T+ H ++ SG D + I ++R T + L
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 422 FTADQQGIWVSTSDSDVRCWKLPPLSTLT 508
FT D + + D+ V+ W L LT
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWDLTAGKLLT 179
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/102 (23%), Positives = 44/102 (43%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
P G +VSG + +++VWD L + K H +++L +GS+D T+K W
Sbjct: 153 PDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Query: 230 SVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIIT 355
+ + + + V L V+ G ++ L I +
Sbjct: 213 DLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFS 254
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/157 (22%), Positives = 66/157 (42%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
T + ++ +G+ +++WD + L GH N ++ G SGS D +
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 221 KLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEET 400
K+W + ++ C+ T + H+ V L T V+SGG D +V + +L +
Sbjct: 126 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 401 SPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTS 511
I L F + + ++D V+ W L + S
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/149 (22%), Positives = 61/149 (40%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
VLV+G + + +W + ++ L GH + ++ +G++ GTIKLW + +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ V T+ H ++ SG D + I ++R T + L
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 422 FTADQQGIWVSTSDSDVRCWKLPPLSTLT 508
FT D + + D+ V+ W L LT
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWDLTAGKLLT 179
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/102 (23%), Positives = 44/102 (43%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
P G +VSG + +++VWD L + K H +++L +GS+D T+K W
Sbjct: 153 PDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Query: 230 SVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIIT 355
+ + + + V L V+ G ++ L I +
Sbjct: 213 DLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFS 254
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/96 (28%), Positives = 51/96 (53%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L++GS + +VWD + S + L+GH NV A+ + ++GS DGT+++W +
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
R +T+ E VWA+ + V+ G + +++
Sbjct: 262 RLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +2
Query: 35 EATMNPPGT-VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL--VVSRDGTQCVSGS 205
+ T NP T S S ++ +++W+ + L H V + D ++GS
Sbjct: 147 QVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
D T K+W + CV T+ H+ V A+ +I+G D V I
Sbjct: 207 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ- 241
+V+G+ + +RV++ ++ + H D ++ + V +S S D IKLW +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
Query: 242 QRCVSTIRVHSEAVWALI----ATDTFSHVISGGRDRLVIITELRNPE-NFMIVCEETSP 406
C HS V + T+TF+ S DR + I L +P+ NF + +
Sbjct: 132 WACTQIFEGHSHYVMQVTFNPKDTNTFA---SASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
Query: 407 ILKLCFT-ADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNV 550
FT D+ + + D + W S + +T + +++N + V
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV--QTLEGHTHNVSAV 235
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVS-RDGTQCVSGSSDGT 217
++P ++S S + ++++WD + + +GH V + + +D S S D T
Sbjct: 107 VHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRT 166
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWAL--IATDTFSHVISGGRDRLVIITELRNPENFMIVC 391
IK+W++ T+ H + V + ++I+G D + + + +
Sbjct: 167 IKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
Query: 392 EETSPILKLCFTADQQGIWVSTSDSDVRCW 481
T + +CF + I + D VR W
Sbjct: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 57.6 bits (133), Expect = 8e-09
Identities = 34/150 (22%), Positives = 64/150 (42%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
++ +G+ +++WD + L GH N ++ G SGS D +K+W + +
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ C+ T + H+ V L T ++SGG D +V + +L + I L
Sbjct: 226 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 285
Query: 422 FTADQQGIWVSTSDSDVRCWKLPPLSTLTS 511
F + + ++D V+ W L + S
Sbjct: 286 FHPHEFLLATGSADKTVKFWDLETFELIGS 315
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/140 (25%), Positives = 59/140 (42%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P G SGS + L++WD R + KGH V L + DG VSG D +K+
Sbjct: 203 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKV 262
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSP 406
W ++ + + + H + +L + +G D+ V +L E ET+
Sbjct: 263 WDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTG 322
Query: 407 ILKLCFTADQQGIWVSTSDS 466
+ L F D + + +S
Sbjct: 323 VRCLTFNPDGKSVLCGLQES 342
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/142 (23%), Positives = 59/142 (41%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
VLV+G + + +W + ++ L GH + ++ +G++ GTIKLW + +
Sbjct: 124 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 183
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ V T+ H ++ SG D + I ++R T + L
Sbjct: 184 AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 243
Query: 422 FTADQQGIWVSTSDSDVRCWKL 487
FT D + I D+ V+ W L
Sbjct: 244 FTPDGRWIVSGGEDNVVKVWDL 265
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/102 (24%), Positives = 44/102 (43%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
P G +VSG + V++VWD L + K H +++L +GS+D T+K W
Sbjct: 246 PDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFW 305
Query: 230 SVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIIT 355
+ + + + V L V+ G ++ L I +
Sbjct: 306 DLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFS 347
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/96 (28%), Positives = 50/96 (52%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L++GS + +VWD + S + L GH NV A+ + ++GS DGT+++W +
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
R +T+ E VWA+ + V+ G + +++
Sbjct: 262 RLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRN---CSRLMKLKGHCDNVKALVVS-RDGTQCVSGSSD 211
++P ++S S + ++++WD N C+++ + GH V +V + +D S S D
Sbjct: 107 VHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE--GHSHYVMQVVFNPKDTNTFASASLD 164
Query: 212 GTIKLWSVSQQRCVSTIRVHSEAVWAL--IATDTFSHVISGGRDRLVIITELRNPENFMI 385
TIK+W++ T+ H + V + ++I+G D + + +
Sbjct: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
Query: 386 VCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ T + +CF + I + D VR W
Sbjct: 225 LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +2
Query: 35 EATMNPPGT-VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL--VVSRDGTQCVSGS 205
+ NP T S S ++ +++W+ + L H V + D ++GS
Sbjct: 147 QVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
D T K+W + CV T+ H+ V A+ +I+G D V I
Sbjct: 207 DDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 42.3 bits (95), Expect = 3e-04
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS-VSQ 241
+V+G+ + +RV++ ++ + H D ++ + V +S S D IKLW +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
Query: 242 QRCVSTIRVHSEAVWALI----ATDTFSHVISGGRDRLVIITELRNPE-NFMIVCEETSP 406
C HS V ++ T+TF+ S DR + I L +P+ NF + +
Sbjct: 132 WACTQIFEGHSHYVMQVVFNPKDTNTFA---SASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
Query: 407 ILKLCFT-ADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNV 550
FT D+ + + D + W S + +T D +++N + V
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV--QTLDGHTHNVSAV 235
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/96 (28%), Positives = 50/96 (52%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L++GS + +VWD + S + L GH NV A+ + ++GS DGT+++W +
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
R +T+ E VWA+ + V+ G + +++
Sbjct: 262 RLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRN---CSRLMKLKGHCDNVKALVVS-RDGTQCVSGSSD 211
++P ++S S + ++++WD N C+++ + GH V +V + +D S S D
Sbjct: 107 VHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE--GHSHYVMQVVFNPKDTNTFASASLD 164
Query: 212 GTIKLWSVSQQRCVSTIRVHSEAVWAL--IATDTFSHVISGGRDRLVIITELRNPENFMI 385
TIK+W++ T+ H + V + ++I+G D + + +
Sbjct: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
Query: 386 VCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ T + +CF + I + D VR W
Sbjct: 225 LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +2
Query: 35 EATMNPPGT-VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL--VVSRDGTQCVSGS 205
+ NP T S S ++ +++W+ + L H V + D ++GS
Sbjct: 147 QVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
D T K+W + CV T+ H+ V A+ +I+G D V I
Sbjct: 207 DDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 42.3 bits (95), Expect = 3e-04
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS-VSQ 241
+V+G+ + +RV++ ++ + H D ++ + V +S S D IKLW +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
Query: 242 QRCVSTIRVHSEAVWALI----ATDTFSHVISGGRDRLVIITELRNPE-NFMIVCEETSP 406
C HS V ++ T+TF+ S DR + I L +P+ NF + +
Sbjct: 132 WACTQIFEGHSHYVMQVVFNPKDTNTFA---SASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
Query: 407 ILKLCFT-ADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNV 550
FT D+ + + D + W S + +T D +++N + V
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV--QTLDGHTHNVSAV 235
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/96 (28%), Positives = 50/96 (52%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L++GS + +VWD + S + L GH NV A+ + ++GS DGT+++W +
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
R +T+ E VWA+ + V+ G + +++
Sbjct: 262 RLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRN---CSRLMKLKGHCDNVKALVVS-RDGTQCVSGSSD 211
++P ++S S + ++++WD N C+++ + GH V +V + +D S S D
Sbjct: 107 VHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE--GHSHYVMQVVFNPKDTNTFASASLD 164
Query: 212 GTIKLWSVSQQRCVSTIRVHSEAVWAL--IATDTFSHVISGGRDRLVIITELRNPENFMI 385
TIK+W++ T+ H + V + ++I+G D + + +
Sbjct: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
Query: 386 VCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ T + +CF + I + D VR W
Sbjct: 225 LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +2
Query: 35 EATMNPPGT-VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL--VVSRDGTQCVSGS 205
+ NP T S S ++ +++W+ + L H V + D ++GS
Sbjct: 147 QVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
D T K+W + CV T+ H+ V A+ +I+G D V I
Sbjct: 207 DDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Score = 42.3 bits (95), Expect = 3e-04
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS-VSQ 241
+V+G+ + +RV++ ++ + H D ++ + V +S S D IKLW +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENG 131
Query: 242 QRCVSTIRVHSEAVWALI----ATDTFSHVISGGRDRLVIITELRNPE-NFMIVCEETSP 406
C HS V ++ T+TF+ S DR + I L +P+ NF + +
Sbjct: 132 WACTQIFEGHSHYVMQVVFNPKDTNTFA---SASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
Query: 407 ILKLCFT-ADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNV 550
FT D+ + + D + W S + +T D +++N + V
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV--QTLDGHTHNVSAV 235
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 57.6 bits (133), Expect = 8e-09
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+VS S +K ++VW+ NC L GH V + VS DG+ C SG DG + LW +++
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 226
Query: 245 RCVSTIRVHS 274
+ + ++ +S
Sbjct: 227 KKLYSLEANS 236
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 6/157 (3%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+ ++ G +SGS + LR+WD + GH +V ++ S D Q VS S D
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR 127
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS------HVISGGRDRLVIITELRNPEN 376
TIKLW+ + C TI E ++ FS ++S D+ V + L N +
Sbjct: 128 TIKLWNTLGE-CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 377 FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ T + + + D D V W L
Sbjct: 187 RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +2
Query: 62 VLVSGSTEKVLRVW-----DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
++VS S +K + +W D +L GH V+ +V+S DG +SGS DG ++L
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
W ++ H++ V ++ + ++S RDR +
Sbjct: 90 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 129
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
++P G++ SG + V+ +WD +L L+ + + AL S + + + G IK
Sbjct: 202 VSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPNRYWLCAATEHG-IK 259
Query: 224 LWSVSQQRCVSTIRVHSEA 280
+W + + V ++V +A
Sbjct: 260 IWDLESKSIVEDLKVDLKA 278
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/100 (28%), Positives = 53/100 (53%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P G + S S +K +R+W+ + +GH V + S D +SGS D T+K+
Sbjct: 369 SPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKI 428
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
W + ++ + H++ V+A+ + V+SGG+DR++
Sbjct: 429 WEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVL 468
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
++ + + +L+SGS + L++W+ R L GH D V A+ S DG + VSG D
Sbjct: 406 YQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKD 465
Query: 212 GTIKLW 229
+KLW
Sbjct: 466 RVLKLW 471
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +2
Query: 29 RHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMK-LKGHCDNVKALVVSRDGTQCVSGS 205
R+ T LVSGS + + +W+P + K L GH V + S DG S S
Sbjct: 320 RYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASAS 379
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
D +++LW+ + V+ R H V+ + + ++SG +D + I E+R +
Sbjct: 380 FDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQD 439
Query: 386 VCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
+ + + ++ D + + D ++ WK
Sbjct: 440 LPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 83 EKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTI 262
+ V R+ CS+ + GH + V + S DG Q SGS D T++LW + + + T
Sbjct: 90 QAVFRIRPVNRCSQT--IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTC 147
Query: 263 RVHSEAVWALIATDTFSHVISGGR 334
+ H V + + H++SG +
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGSK 171
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
+ +P G L SGS + +R+WD + L KGH + V + S DG VSGS G I
Sbjct: 116 SFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEI 175
Query: 221 KLWS 232
W+
Sbjct: 176 CCWN 179
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
++ P V+ S + R+WD ++ L GH V + DG +GS D TIK
Sbjct: 207 LSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIK 265
Query: 224 LWSVSQQRCVSTIRVHSEAVWAL 292
+W +Q + + ++ H + +L
Sbjct: 266 MWETTQGKLIRELKGHGHWINSL 288
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE-ETSPILKLC 421
RC TI H+EAV + + + SG D V + +L E + C+ + +L +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT-ETPLFTCKGHKNWVLTVA 158
Query: 422 FTADQQGIWVSTSDSDVRCW 481
++ D + + + ++ CW
Sbjct: 159 WSPDGKHLVSGSKSGEICCW 178
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCS-RLMKLKGHCDNVKALV-----VSRDGTQCVSGSS 208
+P G LVSGS + W+P+ L GH + + +S + V+ S
Sbjct: 160 SPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSK 219
Query: 209 DGTIKLWSVSQQRCVSTIRVHSEAV 283
DG ++W ++ ++ + + H+ AV
Sbjct: 220 DGDARIWDITLKKSIICLSGHTLAV 244
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L++GS + +VWD + S + L+GH NV A+ + ++GS DGT+++W +
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTY 261
Query: 245 RCVSTIRVHSEAVWAL 292
R +T+ E VWA+
Sbjct: 262 RLENTLNYGLERVWAI 277
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +2
Query: 35 EATMNPPGT-VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL--VVSRDGTQCVSGS 205
+ T NP T S S ++ +++W+ + L H V + D ++GS
Sbjct: 147 QVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGS 206
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
D T K+W + CV T+ H+ V A+ +I+G D V I
Sbjct: 207 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRI 255
Score = 37.9 bits (84), Expect = 0.007
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 7/169 (4%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ- 241
+V+G+ + +RV++ ++ + H D ++ + V +S S D IKLW +
Sbjct: 72 VVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
Query: 242 QRCVSTIRVHSEAVWALI----ATDTFSHVISGGRDRLVIITELRNPE-NFMIVCEETSP 406
C HS V + T+TF+ S DR + I L +P+ NF +
Sbjct: 132 WLCTQIFEGHSHYVMQVTFNPKDTNTFA---SASLDRTIKIWNLGSPDPNFTLDAHLKGV 188
Query: 407 ILKLCFT-ADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNV 550
FT D+ + + D + W S + +T + +++N + V
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV--QTLEGHTHNVSAV 235
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 56.0 bits (129), Expect = 2e-08
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G L +G ++ + +WD R + GH + V L ++ SGS D T+K+W+V
Sbjct: 234 GRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNV 293
Query: 236 SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENF-MIVCEETSPIL 412
+ ++ H + A+ A ++ GRDR ++ ++ PE+ MI S +
Sbjct: 294 EDKAFITENHGHQGEILAIDALRK-ERALTVGRDRTMLYHKV--PESTRMIYRAPASSLE 350
Query: 413 KLCFTADQQGIWVSTSDS-DVRCW 481
CF +D + ++S SD+ V W
Sbjct: 351 SCCFISDNE--YLSGSDNGTVALW 372
Score = 38.3 bits (85), Expect = 0.005
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 19/157 (12%)
Frame = +2
Query: 95 RVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTI---- 262
RV +P + + H +V ++ +S D ++ S S DGTI W VS + I
Sbjct: 144 RVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSD 203
Query: 263 ---------------RVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEE 397
+ HS AL + ++ +GG DR V I ++R E+
Sbjct: 204 EILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGH 263
Query: 398 TSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLT 508
+ + LCF ++ + D V+ W + + +T
Sbjct: 264 RNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFIT 300
Score = 37.5 bits (83), Expect = 0.009
Identities = 31/97 (31%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Frame = +2
Query: 71 SGSTEKVLRVWDPRNCSRLMKL-----KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
SG T+K + D S MKL K H AL VS DG +G D + +W V
Sbjct: 192 SGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDV 251
Query: 236 SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
+ V H V L S + SG DR V
Sbjct: 252 RTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTV 288
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+VS S +K ++VW+ +NC L GH + + VS DG+ C SG DG I LW +++
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 245 RCVSTIRVHS 274
+ + ++ S
Sbjct: 226 KKLYSLEAGS 235
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+ ++ G +SGS + LR+WD + GH +V ++ S D Q VS S D
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDR 127
Query: 215 TIKLWSVSQQRCVSTIRV---HSEAVWAL-IATDTF-SHVISGGRDRLVIITELRN 367
TIKLW+ + C TI H E V + + +T ++S D+ V + L+N
Sbjct: 128 TIKLWNTLGE-CKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Score = 47.6 bits (108), Expect = 8e-06
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRN-CS-RLMKLKGHCDNVKALVVSRDGT--QCVSGSSDGTIKLWS 232
+VS S ++ +++W+ C + + GH + V + S + VS S D T+K+W+
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 233 VSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPIL 412
+ + +++ HS + + + S SGG+D ++++ +L + + E S I
Sbjct: 180 LQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK-LYSLEAGSIIH 238
Query: 413 KLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNN 547
LCF+ ++ + +T +S +R W L S + D S N
Sbjct: 239 SLCFSPNRYWLCAATENS-IRIWDLESKSVVEDLKVDLKSEAEKN 282
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +2
Query: 62 VLVSGSTEKVLRVW-----DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
++V+ S +K + +W D +L GH V+ +V+S DG +SGS DG ++L
Sbjct: 30 IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
W ++ H++ V ++ + ++S RDR +
Sbjct: 90 WDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Score = 35.1 bits (77), Expect = 0.048
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQC-VSGSSDGTIKLWSVSQQRC---VSTIRV--HSEAVWALI 295
++ H D V A+ D + V+ S D +I LW +++ V+ R+ HS V ++
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV 70
Query: 296 ATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVR 475
+ +SG D + + +L E T +L + F+ D + I ++ D ++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 476 CW 481
W
Sbjct: 131 LW 132
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/83 (19%), Positives = 40/83 (48%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVS 199
+G + ++P G++ SG + V+ +WD +L L+ + +L S +
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCFS-PNRYWLC 250
Query: 200 GSSDGTIKLWSVSQQRCVSTIRV 268
+++ +I++W + + V ++V
Sbjct: 251 AATENSIRIWDLESKSVVEDLKV 273
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+VS S +K ++VW+ +NC L GH + + VS DG+ C SG DG I LW +++
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 245 RCVSTIRVHS 274
+ + ++ S
Sbjct: 226 KKLYSLEAGS 235
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRN-CS-RLMKLKGHCDNVKALVVSRDGT--QCVSGSSDGTIKLWS 232
+VS S ++ +++W+ C + + GH + V + S + VS S D T+K+W+
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 233 VSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPIL 412
+ + +T+ HS + + + S SGG+D ++++ +L + + E S I
Sbjct: 180 LQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK-LYSLEAGSIIH 238
Query: 413 KLCFTADQQGIWVSTSDSDVRCWKLPPLSTL 505
LCF+ ++ + +T +S +R W L S +
Sbjct: 239 SLCFSPNRYWLCAATENS-IRIWDLESKSVV 268
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+ ++ G +SGS + LR+WD + GH +V ++ S D Q VS S D
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDR 127
Query: 215 TIKLWSVSQQRCVSTIRV---HSEAVWAL-IATDTF-SHVISGGRDRLVIITELRN 367
TIKLW+ + C TI H E V + + +T ++S D+ V + L+N
Sbjct: 128 TIKLWNTLGE-CKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +2
Query: 62 VLVSGSTEKVLRVW-----DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
V+V+ S +K + +W D ++ GH V+ +V+S DG +SGS DG ++L
Sbjct: 30 VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRL 89
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
W ++ H++ V ++ + ++S RDR +
Sbjct: 90 WDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Score = 35.5 bits (78), Expect = 0.036
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQC-VSGSSDGTIKLWSVSQQRC---VSTIRV--HSEAVWALIATD 304
H D V A+ D + V+ S D +I LW ++++ V+ R+ HS V ++ +
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 305 TFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+SG D + + +L E+ T +L + F+ D + I ++ D ++ W
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/87 (19%), Positives = 42/87 (48%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVS 199
+G + ++P G++ SG + V+ +WD +L L+ + +L S +
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCFS-PNRYWLC 250
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEA 280
+++ +I++W + + V ++V +A
Sbjct: 251 AATENSIRIWDLESKSVVEDLKVDLKA 277
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVW--DPRNCSRL--MKLKGHCDNVKALVVSRDGTQCV- 196
H N GT L SGS ++ R+W +P S+ ++LKGH D+V L + V
Sbjct: 24 HSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVA 83
Query: 197 SGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELR 364
+ S D +++LW +C + + E + D +HV G RD + I ++R
Sbjct: 84 TASGDKSVRLWDARSGKCTQQVELSGENINITYKPDG-THVAVGNRDDELTILDVR 138
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 137 KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
+GH V ++ + +GT+ SGS D T ++W++
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/147 (21%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRN--CSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+VS + ++ +++WD C+ + +C+ A+ +S DG SG DG ++LW +
Sbjct: 331 VVSAAYDRTIKLWDLHKGYCTNTVLFTSNCN---AICLSIDGLTVFSGHMDGNLRLWDIQ 387
Query: 239 QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPIL-- 412
+ +S + HS AV ++ + + +++ GRD + + + R E + + +
Sbjct: 388 TGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASN 447
Query: 413 --KLCFTADQQGIWVSTSDSDVRCWKL 487
+ C + D + ++D V W L
Sbjct: 448 WSRSCISPDDDYVAAGSADGSVHVWSL 474
Score = 44.8 bits (101), Expect = 6e-05
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G + SG + LR+WD + L ++ GH V ++ +SR+G + ++ D ++
Sbjct: 369 GLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDT 428
Query: 236 SQQRCVSTIRVHSEAV---W--ALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEET 400
T+R + W + I+ D +V +G D V + L I+ E+T
Sbjct: 429 RTLEICGTLRASGNRLASNWSRSCISPDD-DYVAAGSADGSVHVWSLSKGNIVSILKEQT 487
Query: 401 SPIL 412
SPIL
Sbjct: 488 SPIL 491
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
+++ ++ L VWD + L GH D V A+ VS+ VS + D TIKLW + +
Sbjct: 288 VIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK 347
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
C +T+ S ++ D + V SG D + + +++ + V +S + +
Sbjct: 348 GYCTNTVLFTSNCNAICLSIDGLT-VFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVS 406
Query: 422 FTADQQGIWVSTSDS 466
+ + I S D+
Sbjct: 407 LSRNGNRILTSGRDN 421
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +2
Query: 194 VSGSSDGTIK-LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNP 370
V + DGT + S C + I H +++ + +GG+DR V + + +
Sbjct: 204 VRRNEDGTDHFVESTIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSG 263
Query: 371 ENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ IL + T D + + +TS +++ W
Sbjct: 264 TLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 54.8 bits (126), Expect = 6e-08
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVSGSSDGTI 220
++ G++L S S ++ ++W + L + K H D + A+VVS+DG +GS+D I
Sbjct: 200 LSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGF-VYTGSADKKI 258
Query: 221 KLWSVSQQR--CVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITE 358
K+W+ ++ V+T+ H AV AL ++ + SG DR +++ E
Sbjct: 259 KVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/117 (22%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTI-RVHSEAVWALIATDTFSHV 319
H D V +L +S+DG+ S S D + K+W S +C+ +I + H +A+ A++ + V
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKD-GFV 249
Query: 320 ISGGRDRLVIITELRNPENFMI--VCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
+G D+ + + ++ ++ ++ + + S + L + D + ++ D + W+
Sbjct: 250 YTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
Score = 40.7 bits (91), Expect = 0.001
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Frame = +2
Query: 71 SGSTEKVLRVWDPRNC--SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW----- 229
+GS +K ++VW+ ++ S + L H V AL +S DG SG+ D +I +W
Sbjct: 251 TGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLIN 310
Query: 230 ---SVSQQRCVSTIRVHSEAVWAL-IATDTFSHVISGGRDRLVIITE--LRNPENF--MI 385
V +R H +A+ L +A+D V+SG D+ + + L E + +
Sbjct: 311 GDDEELHMSVVGALRGHRKAIMCLAVASDL---VLSGSADKSLRVWRRGLMEKEGYSCLA 367
Query: 386 VCE-ETSPILKLCFTADQQGIWVSTSDSDVRC 478
V E T P+ L + S S+SD C
Sbjct: 368 VLEGHTKPVKSLAVSVSD-----SDSNSDYSC 394
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Frame = +2
Query: 62 VLVSGSTEKVLRVW-----DPRNCSRLMKLKGHCDNVKALVV------SRDGTQCV--SG 202
+++SGS +K LRVW + S L L+GH VK+L V S C+ SG
Sbjct: 340 LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSG 399
Query: 203 SSDGTIKLWSV 235
S D ++K+W++
Sbjct: 400 SLDLSLKVWNL 410
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 54.4 bits (125), Expect = 7e-08
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEK-VLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
A N G L G + L VWD R + ++K +GH +V + S D +G+ D
Sbjct: 312 AVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDN 371
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE 394
+K+W+V C T H+ AV AL ++S D V + + +N+
Sbjct: 372 KVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTT 431
Query: 395 ETSPILKLCFTADQQG--IWVSTSDS-DVRCW 481
T P + TAD G + T DS ++ W
Sbjct: 432 PT-PRQFVSLTADPSGDVVCAGTLDSFEIFVW 462
Score = 31.1 bits (67), Expect = 0.78
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKV-LRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
T +P G V+ +G+ + + VW + L GH V L+ S S S D T
Sbjct: 441 TADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYT 500
Query: 218 IKLWSV-SQQRCVSTIRVHSEAVWALIATD 304
++LW V + + V T R + + + D
Sbjct: 501 VRLWDVFASKGTVETFRHNHDVLTVAFRPD 530
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 54.4 bits (125), Expect = 7e-08
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEK-VLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
A N G L G + L VWD R + ++K +GH +V + S D +G+ D
Sbjct: 352 AVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDN 411
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE 394
+K+W+V C T H+ AV AL ++S D V + + +N+
Sbjct: 412 KVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTT 471
Query: 395 ETSPILKLCFTADQQG--IWVSTSDS-DVRCW 481
T P + TAD G + T DS ++ W
Sbjct: 472 PT-PRQFVSLTADPSGDVVCAGTLDSFEIFVW 502
Score = 31.1 bits (67), Expect = 0.78
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKV-LRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
T +P G V+ +G+ + + VW + L GH V L+ S S S D T
Sbjct: 481 TADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYT 540
Query: 218 IKLWSV-SQQRCVSTIRVHSEAVWALIATD 304
++LW V + + V T R + + + D
Sbjct: 541 VRLWDVFASKGTVETFRHNHDVLTVAFRPD 570
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/115 (23%), Positives = 53/115 (46%)
Frame = +2
Query: 125 LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATD 304
+ KL+GH + V + R G ++GS D +K+WS+ C+++ R H + L +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 305 TFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSD 469
+ V S D ++ + L + ++ T + + F+ Q ++ S SD
Sbjct: 358 NNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSD 412
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
A + G +++GS ++++++W L +GH ++ L VS + S S+D
Sbjct: 311 AIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFV 370
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWAL 292
I++W + +S +R H+ AV A+
Sbjct: 371 IRVWRLPDGMPISVLRGHTGAVTAI 395
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVS-RDGT--QCVSGSSDGTIKLWS 232
++ S S + V+RVW + + L+GH V A+ S R + Q +S S DGT ++W
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Query: 233 VSQQRCVSTIRVHS 274
+ + I V S
Sbjct: 421 ARYSQWLPRIYVPS 434
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
GT L G++ +++WD C + ++GH V AL S + SGS D +I +
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDI 278
Query: 236 -SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPIL 412
+Q+ VS ++ H + L + + SGG D + + + + + CE + +
Sbjct: 279 RTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVK 338
Query: 413 KLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTS-ETYDQNSYNTNNVYQR 559
+ ++ G+ S + RC + +T T D NS N V+ +
Sbjct: 339 AIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSK 388
Score = 48.0 bits (109), Expect = 6e-06
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCS-RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
+VL SGS +K + D R + KLKGH + L S D + SG +D + +W+
Sbjct: 262 SVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQ 321
Query: 236 SQQRCVSTIRVHSEAVWALI-ATDTFSHVISGGRDRLVIITELRNPENFMIVCEET-SPI 409
+ V H+ AV A+ + F + SGG I N + C +T S +
Sbjct: 322 HSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQV 381
Query: 410 LKLCFTADQQGIWVST---SDSDVRCWKLPPLS---TLTSETY 520
L ++ + + VST S + + WK P +S TLT +Y
Sbjct: 382 CNLVWSKNVNEL-VSTHGYSQNQIIVWKYPTMSKLATLTGHSY 423
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
V G ++ + VW S+L L GH V L VS DG V+G+ D T++ W+V
Sbjct: 394 VSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
VL SGS + + + D + L + GH V ++ S DG +GSSD T++LW +
Sbjct: 215 VLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKM 274
Query: 242 QRCVSTIRVHSEAVWAL 292
+ + T+ H++ VW++
Sbjct: 275 RAAIQTMSNHNDQVWSV 291
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIK 223
+P G L GS + + V+D L +L+GH V++LV S D SGS DG +
Sbjct: 167 SPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVN 226
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELR 364
+ + + ++ H+ V ++ A+ + +G DR V + +L+
Sbjct: 227 MHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
AT + P +L++GS ++ +++W P + GH V AL G S S D
Sbjct: 25 ATEDRPA-LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSF 83
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWAL 292
++++ V ++ + VW +
Sbjct: 84 VRVFDVDTNATIAVLEAPPSEVWGM 108
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGT-QCVSGSSDGTIK 223
+P G + S S + +RV+D + + L+ V + GT V+G S ++K
Sbjct: 69 HPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVK 128
Query: 224 LWSVSQQRCVSTIRV 268
LW + R +ST+ +
Sbjct: 129 LWDTASWRLISTLSI 143
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P G + +GS+++ +R+WD + + + + H D V ++ G G+ +L
Sbjct: 252 SPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPG-----GTGVRAGRL 306
Query: 227 WSVSQQRCVS 256
SVS + VS
Sbjct: 307 ASVSDDKSVS 316
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 194 VSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIA 298
++GS D T+KLW + V T HS V AL A
Sbjct: 34 LTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAA 68
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/100 (27%), Positives = 48/100 (48%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+ VSG + ++VW+ +N L L GH D ++ + + VS S D TI++W+
Sbjct: 65 LFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
+ CVS + H+ V V+S D+ V + ++
Sbjct: 125 RTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/110 (22%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVW--DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
A +P ++VSG+ ++ +++W + + L+GH +NV +++ VS S D
Sbjct: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSED 269
Query: 212 GTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
+I++W +++ + T R + W ++A ++++ G D +I+ +L
Sbjct: 270 KSIRVWDATKRTGLQTFRREHDRFW-ILAVHPEMNLLAAGHDSGMIVFKL 318
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/145 (19%), Positives = 59/145 (40%)
Frame = +2
Query: 89 VLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRV 268
V+++WD R + + + H V+ + VSG D IK+W+ RC+ T+
Sbjct: 32 VIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLG 91
Query: 269 HSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIW 448
H + + + + ++S D+ + I ++ ++ ++ F + +
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVV 151
Query: 449 VSTSDSDVRCWKLPPLSTLTSETYD 523
++ D VR W + L T D
Sbjct: 152 SASLDQTVRVWDIGALRKKTVSPAD 176
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQC-VSGSSDGTIKLWS 232
G VL SGS +K ++VWD M LK H V +L+ +C +S S DGTIKLW+
Sbjct: 322 GEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLC---WDKCLISSSLDGTIKLWA 378
Query: 233 VSQQRCVSTIRVHSE 277
S+ + ++ +
Sbjct: 379 CSENESLKVVQTRKQ 393
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEA 280
L+GH +++K + + + + S S DGT+ +W + +CV +I + +EA
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEA 231
Score = 37.1 bits (82), Expect = 0.012
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSR-----LMKLKGH-CDNVKALVVSRDGTQCVSGS 205
M +L +G++ + VW + L L+GH V VV G SGS
Sbjct: 272 MTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVG--GEVLYSGS 329
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
D TIK+W ++ +C T++ H V +L+ D +IS D + + E+ +
Sbjct: 330 VDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWD--KCLISSSLDGTIKLWACSENESLKV 387
Query: 386 V 388
V
Sbjct: 388 V 388
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 51.2 bits (117), Expect = 7e-07
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Frame = +2
Query: 11 PRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMK----LKGHCDNVKALVVSR 178
PR +G T +P + SGS++ ++R WD +C + + L G + + V S
Sbjct: 195 PRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSL 254
Query: 179 DGTQC---VSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVI 349
+C VSG S GT++ W + H V L A + + V S G D VI
Sbjct: 255 LSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVI 314
Query: 350 ITELRNPEN 376
+ +L N
Sbjct: 315 LYKLSGSTN 323
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/102 (31%), Positives = 56/102 (54%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+A + P LVSGS++ L++W + + L L GH D V+ L V D +S S DG
Sbjct: 155 QAVIRLPSGELVSGSSDASLKLWKGK--TSLQTLSGHTDTVRGLAVMPD-LGFLSASHDG 211
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDR 340
+I+LW++S + + + H+ V+++ A + ++S DR
Sbjct: 212 SIRLWALSGEVLLEMVG-HTSLVYSVDAHSS-GLIVSASEDR 251
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/141 (26%), Positives = 59/141 (41%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
LVSGS + + VW+ N + LKGH V + + D VS S D T+K W Q
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI--DNEDIVSSSVDQTLKRWRNGQ- 142
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCF 424
V + H + A+I + ++SG D + + + + + T + L
Sbjct: 143 -LVESWDAHQSPIQAVIRLPS-GELVSGSSDASLKL--WKGKTSLQTLSGHTDTVRGLAV 198
Query: 425 TADQQGIWVSTSDSDVRCWKL 487
D G ++ D +R W L
Sbjct: 199 MPD-LGFLSASHDGSIRLWAL 218
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
++VS S ++ ++W C + ++ G + K L T C SDG +++W+V
Sbjct: 243 LIVSASEDRHAKIWKDGVCVQSLEHPGCIWDAKFLETGDIVTAC----SDGVVRVWTV 296
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/102 (31%), Positives = 56/102 (54%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
+A + P LVSGS++ L++W + + L L GH D V+ L V D +S S DG
Sbjct: 155 QAVIRLPSGELVSGSSDASLKLWKGK--TSLQTLSGHTDTVRGLAVMPD-LGFLSASHDG 211
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDR 340
+I+LW++S + + + H+ V+++ A + ++S DR
Sbjct: 212 SIRLWALSGEVLLEMVG-HTSLVYSVDAHSS-GLIVSASEDR 251
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/141 (26%), Positives = 59/141 (41%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
LVSGS + + VW+ N + LKGH V + + D VS S D T+K W Q
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI--DNEDIVSSSVDQTLKRWRNGQ- 142
Query: 245 RCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCF 424
V + H + A+I + ++SG D + + + + + T + L
Sbjct: 143 -LVESWDAHQSPIQAVIRLPS-GELVSGSSDASLKL--WKGKTSLQTLSGHTDTVRGLAV 198
Query: 425 TADQQGIWVSTSDSDVRCWKL 487
D G ++ D +R W L
Sbjct: 199 MPD-LGFLSASHDGSIRLWAL 218
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
++VS S ++ ++W C + ++ G + K L T C SDG +++W+V
Sbjct: 243 LIVSASEDRHAKIWKDGVCVQSLEHPGCIWDAKFLETGDIVTAC----SDGVVRVWTV 296
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 50.8 bits (116), Expect = 9e-07
Identities = 29/110 (26%), Positives = 50/110 (45%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
A N G ++ ++ +R+W+P + K H V+ + V+ D + S D
Sbjct: 24 ARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQ 83
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRN 367
+ W VS R + R H V A+ D+ S V+S G DR + + + R+
Sbjct: 84 VYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCS--RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
N +V+VS ++ LRVWD R+ S + + D V ++V+++ T+ + GS DGT+
Sbjct: 111 NDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTK--TEIIGGSVDGTV 168
Query: 221 KLWSV 235
+ + +
Sbjct: 169 RTFDM 173
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
LKGH V A + DG ++ D TI+LW+ + + T + H V + T +
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 314 HVISGGRDRLV 346
S G DR V
Sbjct: 74 KFCSCGGDRQV 84
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCD-NVKA-LVVSRDGTQCVSGSSDGTIKLW 229
G +++G + LR+ D L KGH + K ++ + GS DG + W
Sbjct: 196 GNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFW 255
Query: 230 SVSQQRCVSTIRVHSEAV 283
+ + +S R H V
Sbjct: 256 DLVDAKVLSKFRAHDLVV 273
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/100 (25%), Positives = 47/100 (47%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+ VSG + ++VW+ + L L GH D ++ + + VS S D TI++W+
Sbjct: 65 LFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQS 124
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
+ C+S + H+ V V+S D+ V + ++
Sbjct: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/110 (22%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVW--DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
A+ +P ++VSG+ ++ +++W + + L+GH +NV +++ VS S D
Sbjct: 210 ASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSED 269
Query: 212 GTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
+I++W +++ + T R + W ++A ++++ G D +I+ +L
Sbjct: 270 KSIRVWDATKRTGIQTFRREHDRFW-ILAVHPEINLLAAGHDNGMIVFKL 318
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/145 (18%), Positives = 59/145 (40%)
Frame = +2
Query: 89 VLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRV 268
V+++WD R + + + H V+ + VSG D IK+W+ RC+ T+
Sbjct: 32 VIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLG 91
Query: 269 HSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIW 448
H + + + ++S D+ + I ++ ++ ++ F + +
Sbjct: 92 HLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
Query: 449 VSTSDSDVRCWKLPPLSTLTSETYD 523
++ D VR W + L ++ D
Sbjct: 152 SASLDQTVRVWDIGALKKKSASPAD 176
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQC-VSGSSDGTIKLWS 232
G +L SGS +K +++WD +M LK H V +L+ +C +S S DGTIK+W+
Sbjct: 268 GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLC---WDKCLISSSLDGTIKVWA 324
Query: 233 VSQQ---RCVSTIRVHSEAVWAL 292
S+ + V T R +V AL
Sbjct: 325 YSENGILKVVQTRRQEQSSVHAL 347
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Frame = +2
Query: 14 RAAGIRHEAT-MNPPGTVLVSGSTEKVLRVWDPRNCSR------LMKLKGHCDNVKALVV 172
+AAG+ + M +L +G++ + VW S L L+GH V V
Sbjct: 207 QAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAV 266
Query: 173 SRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATD 304
G SGS D TIK+W ++ +C+ T++ H+ V +L+ D
Sbjct: 267 G--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD 308
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEA 280
L+GH +K + + + S S DGT+++W + +CV +I + +EA
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEA 175
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/82 (28%), Positives = 49/82 (59%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P ++LVSG ++++++WD R+ L L GH + V ++ +++G ++ S D IKL
Sbjct: 277 HPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKL 336
Query: 227 WSVSQQRCVSTIRVHSEAVWAL 292
+ + + + + R H++ V +L
Sbjct: 337 YDIRTMKELQSFRGHTKDVTSL 358
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQC-VSGSSDGTIK 223
N G L++ S +++++++D R L +GH +V +L + VSGSSDG+I
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Query: 224 LWSVSQQR-CVSTIRVHSEAVWAL 292
W V + + H +VW L
Sbjct: 379 HWIVGHENPQIEIPNAHDNSVWDL 402
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
P G L++GS +W+ ++ + M L+ H ++++V S + VSG GT+K W
Sbjct: 133 PSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYW 192
Query: 230 SVSQQRCVSTIRVHSEAV 283
+ + H E++
Sbjct: 193 QNNMNNVKANKTAHKESI 210
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 140 GHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHV 319
GH +VK++ + VSG D +KLW R + ++ H V ++ + +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 320 ISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVS-TSDSDVRCW 481
++ +D+++ + ++R + T + L + + +VS +SD + W
Sbjct: 326 LTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 28.7 bits (61), Expect = 4.2
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ- 241
+VSG L+ W + H ++++ L + + S S D T+K+W ++
Sbjct: 180 MVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKC 239
Query: 242 ----------QRCVSTIR-----VHSEAVWALIATD---TFSHVISGGRDRLVIITELRN 367
+ V IR ++ W + + D T S ++SGG+D+LV + + R+
Sbjct: 240 VDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRS 299
Query: 368 PENFMIVCEETSPILKLCFTADQQGIWVSTSDSD 469
+ + +L + + +Q G W+ T+ D
Sbjct: 300 GRELCSLHGHKNIVLSVKW--NQNGNWLLTASKD 331
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/64 (17%), Positives = 32/64 (50%)
Frame = +2
Query: 137 KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH 316
K C ++ ++ + G + ++GS G LW+ ++ H + + +++ + ++
Sbjct: 121 KNRC-SINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENY 179
Query: 317 VISG 328
++SG
Sbjct: 180 MVSG 183
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N GT LV G + +W+ L K GH +V LV S D + VSGS DG+I++
Sbjct: 87 NNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRV 146
Query: 227 WSV 235
WS+
Sbjct: 147 WSL 149
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 155 VKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGR 334
+KAL + +GT V G G I LW V+ + + H +V L+ + S ++SG +
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 335 DRLVIITEL 361
D + + L
Sbjct: 141 DGSIRVWSL 149
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKL-------KGHCDNV----KALVVSRDGTQCVSG 202
G +L+SGS + V+ VWDP++ + L KG +N+ K +V + + TQ VS
Sbjct: 275 GNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQ-VSW 333
Query: 203 SSDGTI 220
S G +
Sbjct: 334 KSRGAL 339
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 155 VKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSE 277
+ L DG +SGS DG + +W R V T+ +H++
Sbjct: 266 ITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTL-IHAK 305
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLK----GHCDNVKALVVSRDGTQCVS 199
+ A P +VSG +KV+R+WD +L+K GH ++ +L + D + ++
Sbjct: 152 NRAVWGPLNQTIVSGGEDKVIRIWDAET-GKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEA--VWALIATDTFSHVI-SGGRDRLVIIT 355
GS D T KLW + R ++ ++ ++ V A+ + +HV+ GG+D + T
Sbjct: 211 GSLDKTAKLWDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTT 262
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N G +L S + + +W N RL +GH V VSRD ++ ++GS+D T KL
Sbjct: 19 NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKL 78
Query: 227 WSVSQQRCVSTIRVHS 274
W V + + T + ++
Sbjct: 79 WDVKSGKELFTFKFNA 94
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +2
Query: 122 RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIAT 301
R + +KGH + L +R+G S + D T LW + T R H+ AVW +
Sbjct: 2 RPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVS 61
Query: 302 DTFSHVISGGRDRLVIITELRN 367
S +I+G D+ + ++++
Sbjct: 62 RDSSRLITGSADQTAKLWDVKS 83
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+KGH + AL + DG SG DG ++L
Sbjct: 286 VKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 317 VISGGRDRLVIITELRNPENFMIVCEETS---PILKLCFTADQQGIWVSTSDSDVRCWKL 487
++SGG D+++ I + + EE I LC AD + D + W +
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 488 PPLSTLTSET 517
L+ L + T
Sbjct: 223 RTLTLLKTYT 232
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLK----GHCDNVKALVVSRDGTQCVS 199
+ A P +VSG +KV+R+WD +L+K GH ++ +L + D + ++
Sbjct: 152 NRAVWGPLNQTIVSGGEDKVIRIWDAET-GKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEA--VWALIATDTFSHVI-SGGRDRLVIIT 355
GS D T KLW + R ++ ++ ++ V A+ + +HV+ GG+D + T
Sbjct: 211 GSLDKTAKLWDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTT 262
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N G +L S + + +W N RL +GH V VSRD ++ ++GS+D T KL
Sbjct: 19 NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKL 78
Query: 227 WSVSQQRCVSTIRVHS 274
W V + + T + ++
Sbjct: 79 WDVKSGKELFTFKFNA 94
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +2
Query: 122 RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIAT 301
R + +KGH + L +R+G S + D T LW + T R H+ AVW +
Sbjct: 2 RPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVS 61
Query: 302 DTFSHVISGGRDRLVIITELRN 367
S +I+G D+ + ++++
Sbjct: 62 RDSSRLITGSADQTAKLWDVKS 83
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+KGH + AL + DG SG DG ++L
Sbjct: 286 VKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 317 VISGGRDRLVIITELRNPENFMIVCEETS---PILKLCFTADQQGIWVSTSDSDVRCWKL 487
++SGG D+++ I + + EE I LC AD + D + W +
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 488 PPLSTLTSET 517
L+ L + T
Sbjct: 223 RTLTLLKTYT 232
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 48.8 bits (111), Expect = 4e-06
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
L GH V L V + + SGS D TIK+WS+ +C+ T+ HS V +LI D F
Sbjct: 270 LTGHTLAVVTLYVGAN--RLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQF- 326
Query: 314 HVISGGRDRLVIITELRNPENFMIVC--EETSPILKLCFTADQQG---IWVSTSDSDVRC 478
++S D V I N + +E +L LC D + + + +D+ +R
Sbjct: 327 -LLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRL 385
Query: 479 WKLP 490
+ LP
Sbjct: 386 YDLP 389
Score = 34.3 bits (75), Expect = 0.084
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
L SGS +K ++VW N + L H V +L+ +S S D T+K+W+ +
Sbjct: 287 LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICW--DQFLLSCSLDNTVKIWAAIEG 344
Query: 245 RCVSTIRVHSE 277
+ H E
Sbjct: 345 GNLEVTYTHKE 355
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 74 GSTEKVLRVWDP-RNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRC 250
G + L W + + L +L GH V + + + +GS D T+++W + +C
Sbjct: 126 GDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC 185
Query: 251 VSTIRVHSE 277
+++ E
Sbjct: 186 TGVLKLGGE 194
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
A +P G +L +G+++ V+++WD ++ + + K GH V A+ S +G + + DG
Sbjct: 359 AAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG- 417
Query: 218 IKLWSVSQQR 247
++LW + + R
Sbjct: 418 VRLWDLRKLR 427
Score = 37.1 bits (82), Expect = 0.012
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW---S 232
V+ +G + ++D + L L GH V ++ D ++ S+D T+++W
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 233 VSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPI- 409
C T+ HS V A+ T + +S D +L + V +++ +
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVD 355
Query: 410 -LKLCFTADQQGIWVSTSDSDVRCW 481
F D + TS S V+ W
Sbjct: 356 YTAAAFHPDGLILGTGTSQSVVKIW 380
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
A +P G +L +G+++ V+++WD ++ + + K GH V A+ S +G + + DG
Sbjct: 359 AAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG- 417
Query: 218 IKLWSVSQQR 247
++LW + + R
Sbjct: 418 VRLWDLRKLR 427
Score = 37.1 bits (82), Expect = 0.012
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW---S 232
V+ +G + ++D + L L GH V ++ D ++ S+D T+++W
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 233 VSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPI- 409
C T+ HS V A+ T + +S D +L + V +++ +
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVD 355
Query: 410 -LKLCFTADQQGIWVSTSDSDVRCW 481
F D + TS S V+ W
Sbjct: 356 YTAAAFHPDGLILGTGTSQSVVKIW 380
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
A ++ G +++GS +++++VW L +GH ++ L VS + S S+D
Sbjct: 251 AILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCV 310
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWAL 292
I++W + VS +R H+ AV A+
Sbjct: 311 IRVWRLPDGLPVSVLRGHTGAVTAI 335
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +2
Query: 125 LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATD 304
+ +L+GH + V ++ R G ++GS D +K+WS+ C+++ R H + L +
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSS 297
Query: 305 TFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFT---ADQQGIWVSTSDSDVR 475
+ S D ++ + L + ++ T + + F+ + S+ D R
Sbjct: 298 NNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCR 357
Query: 476 CW 481
W
Sbjct: 358 IW 359
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVS-RDGT--QCVSGSSDGTIKLW 229
+ S S + V+RVW + + L+GH V A+ S R G+ Q +S S DGT ++W
Sbjct: 302 IASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWD------PRNCSRLMKLKGHCDNVKALVVSRDGTQCV-SGSSDG 214
G + G+ E + +WD C +L ++ G + L + + V SGS D
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQ--TLFFLTFNWENRNIVASGSEDK 237
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATD-TFSHVISGGRDRLVIITELRNPENFMIVC 391
+K+W V+ +C T+ H + V A+ + T ++SG RDR V++ + R+P N +
Sbjct: 238 KVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKW 297
Query: 392 EETSPILKLCFTA-DQQGIWVSTSDSDVR 475
+ + KL + + VS D V+
Sbjct: 298 STEAKVEKLAWDPHSEHSFVVSLKDGTVK 326
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIA 298
H D + L +S D SGS D T K+W VS RCV ++ H +AV A+++
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVS 261
Score = 47.2 bits (107), Expect = 1e-05
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+L SGS +K +VW + + + H D V A+V DG +GS+DGT+K+W
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDGL-VFTGSADGTVKVWRRED 283
Query: 242 QR------CVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL-RNPENFMIVCEET 400
Q T+ AV A+ + + V G D V E N +N ++ +
Sbjct: 284 QAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVL--KG 341
Query: 401 SPILKLCFTADQQGIWVSTSDSDVRCWKLP 490
+ LC A ++ ++D +R W+ P
Sbjct: 342 HKLAVLCLVAAGNLMFSGSADLGIRVWRRP 371
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
H ++ G +L +GS K +RVW +N K + VKA+V++ G + +G D
Sbjct: 100 HIYSLATSGDLLYTGSDSKNIRVW--KNHVEFSSFKSNSGLVKAIVLA--GDKIFTGHQD 155
Query: 212 GTIKLWSVSQQ 244
G I++W + +
Sbjct: 156 GKIRVWKAASK 166
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWD-PRNCSR---LMKLKGHCDNVKALVVSRDGTQC--------VS 199
G ++ SGS + +RVW P L L GH VK L V RD S
Sbjct: 353 GNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYS 412
Query: 200 GSSDGTIKLWSVSQ 241
GS D ++K+W VS+
Sbjct: 413 GSLDRSVKMWRVSE 426
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 48.0 bits (109), Expect = 6e-06
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDN-VKALVVSRDGTQCVSGSSDGTI 220
++P T L+SG +RVWD R S +L D V++L V DGT V+ ++ GT
Sbjct: 127 LHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTC 186
Query: 221 KLWSVSQQRCVST-------IRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENF 379
+W + + + T ++ H+ + + + ++ + D+ V I + +
Sbjct: 187 YVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLE 246
Query: 380 MIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKLP 490
++ + F+ D + + ++SD R W +P
Sbjct: 247 KVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMP 283
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
++P L + S++K +++W+ L GH V V S DG V+ SSD T +
Sbjct: 219 LSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTAR 278
Query: 224 LWSVSQQRCVSTIRVHSEA 280
LWS+ + V + H +A
Sbjct: 279 LWSMPAGKEVKVYQGHHKA 297
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 125 LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATD 304
+M H +NV A+ D SGS DGT+K+W + C AV ++
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE-SVAAVNTVVLHP 129
Query: 305 TFSHVISGGRDRLVIITELR-NPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
+ +ISG ++ + + +LR N + +V E + + L D + + + W
Sbjct: 130 NQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVW 189
Query: 482 KL 487
+L
Sbjct: 190 RL 191
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = +2
Query: 170 VSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVI 349
+S+ + S D TI+ W RC TI+ V L T ++ + + +
Sbjct: 1 MSQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRL 60
Query: 350 I-TELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+P+ M T+ ++ + F D + ++ + D V+ W L
Sbjct: 61 FDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDL 107
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Frame = +2
Query: 110 RNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWA 289
R C + +K H D V L ++ D S S D T+K+W + +C+ +I+ H +AV +
Sbjct: 124 RRCRTALWIK-HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNS 182
Query: 290 LIATDTFSHVISGGRDRLVII--TELRNPEN----FMIVCEETSPILKLCFTADQQGIWV 451
+ T S V +G D V + E+R F + ++ S + L ++
Sbjct: 183 V--TTAESLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTAL--VTSHMAVYS 238
Query: 452 STSDSDVRCWKL 487
+SD V W++
Sbjct: 239 GSSDGAVNFWEM 250
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW--SV 235
+L S S ++ ++VW + + +K H D V ++ + + +GS+DGT+K+W +
Sbjct: 149 LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVFTGSADGTVKVWKREI 206
Query: 236 SQQRCV----STIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE--E 397
+R T+ AV AL+ + V SG D V E+ + + CE +
Sbjct: 207 RGKRTAHSLFQTLLKQESAVTALVT--SHMAVYSGSSDGAVNFWEM-GDKKLLKHCEVFK 263
Query: 398 TSPILKLCFTADQQGIWVSTSDSDVRCWK 484
+ LC A + ++ +D + W+
Sbjct: 264 KHRLAVLCIAAAGKLLFSGAADKKICVWR 292
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVW--DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
G +L SG+ +K + VW + + + + L GH VK L V DG + L+
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLY 335
Query: 230 SVSQQRCVSTIRV 268
S S + V RV
Sbjct: 336 SGSLDKSVKVWRV 348
Score = 27.5 bits (58), Expect = 9.6
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWD-----PRNCSRLMK-LKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
+++ +GS + ++VW R L + L V ALV S SGSSDG +
Sbjct: 188 SLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVY--SGSSDGAV 245
Query: 221 KLWSVSQQRCVSTIRV---HSEAVWALIATDTFSHVISGGRDRLVII 352
W + ++ + V H AV + A + SG D+ + +
Sbjct: 246 NFWEMGDKKLLKHCEVFKKHRLAVLCIAAAGKL--LFSGAADKKICV 290
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 46.8 bits (106), Expect = 1e-05
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Frame = +2
Query: 62 VLVSGSTEKVLRVW---DPRNC-SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
+L +G+ + + VW +C L GH V +L V + + SG+ D +IK+W
Sbjct: 235 LLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGAN--RLYSGAMDNSIKVW 292
Query: 230 SVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVC--EETS 403
S+ +C+ T+ H+ V +LI D F ++S D V I N + +E
Sbjct: 293 SLDNLQCIQTLTEHTSVVMSLICWDQF--LLSCSLDNTVKIWAATEGGNLEVTYTHKEEY 350
Query: 404 PILKLCFTADQQG---IWVSTSDSDVRCWKLP 490
+L LC D + + S +D+ + + LP
Sbjct: 351 GVLALCGVHDAEAKPVLLCSCNDNSLHLYDLP 382
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNC-SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRC 250
G + L W + S L +L GH V + + + + S D T+++W + +C
Sbjct: 119 GDKCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQC 178
Query: 251 VSTIRVHSE 277
+ + E
Sbjct: 179 TGVLNLGGE 187
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
++ SGS +K L+VW + L +K H D + LV DG + S S+DG +K+W +
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAG-DG-RVYSASADGKVKIWGKEK 243
Query: 242 QRCVSTIRVHSEAVWALIAT 301
++ + + S ++ L AT
Sbjct: 244 RKQIESTSSSSSSLHVLKAT 263
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATD 304
H D++ L V SGS D T+K+W +S +C+ +I+ H +A+ L+A D
Sbjct: 173 HADSISCLAVHAG--IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGD 224
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLK----GHCDNVKALVVSRDGTQCVS 199
+ A P +VSG + +R+WD +L+K GH + + +L + D + ++
Sbjct: 179 NRAVWGPLNQTIVSGGEDAAIRIWDAET-GKLLKQSDEEVGHKEAITSLCKAADDSHFLT 237
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEA--VWALIATDTFSHVI-SGGRDRLVIIT 355
GS D T KLW + R ++ I+ ++ V A+ + +HV+ GG+D + T
Sbjct: 238 GSHDKTAKLWDM---RTLTLIKTYTTVVPVNAVAMSPLLNHVVLGGGQDASAVTT 289
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N G +L S + + VW N RL +GH V +SRD ++ ++GS+D T KL
Sbjct: 46 NRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKL 105
Query: 227 WSVSQQRCVSTIRVHSEA 280
W V + + T + + A
Sbjct: 106 WDVKSGKELFTFKFGAPA 123
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +2
Query: 122 RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIAT 301
R + +KGH + L +R+G S + D T +W + T R HS AVW +
Sbjct: 29 RPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDIS 88
Query: 302 DTFSHVISGGRDRLVIITELRN 367
S +I+G D+ + ++++
Sbjct: 89 RDSSRLITGSADQTAKLWDVKS 110
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+KGH + AL S DG SG DG ++L
Sbjct: 313 VKGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
GT L G++ +++WD C R ++GH V AL + + SGS D +I +
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGAL--AWGSSVLSSGSRDKSILQRDI 321
Query: 236 -SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPIL 412
Q+ VS + H V L + + SGG D + + + + + E T+ +
Sbjct: 322 RCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVK 381
Query: 413 KLCFTADQQGIWVS---TSDSDVRCWKLPPLSTLTS 511
+ ++ G+ S T+D +R W + L+S
Sbjct: 382 AIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSS 417
Score = 42.3 bits (95), Expect = 3e-04
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSR--LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
+VL SGS +K + D R C + KL GH V L S D + SG +D + +W+
Sbjct: 305 SVLSSGSRDKSILQRDIR-CQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 363
Query: 233 VSQQRCVSTIRVHSEAVWALIATDTFSH--VISGG--RDRLVIITELRNPENFMIVCEET 400
+ V H+ AV A IA H + SGG DR + + + +
Sbjct: 364 QHSTQPVLKYSEHTAAVKA-IAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSI-DTC 421
Query: 401 SPILKLCFTADQQGIWVST---SDSDVRCWKLPPLS---TLTSETY 520
S + L ++ + + VST S + + WK P +S TLT TY
Sbjct: 422 SQVCNLAWSKNVNEL-VSTHGYSQNQIIVWKYPTMSKIATLTGHTY 466
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
V G ++ + VW S++ L GH V L VS DG V+G+ D T++ W+V
Sbjct: 437 VSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +2
Query: 104 DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAV 283
D N +M L+GH +V L S D + SGS D T+ +W++ C + +R H V
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV 163
Query: 284 WALIATDTFSHVISGGRDRLVII 352
+ S + S D+ VII
Sbjct: 164 KGVTWDPIGSFIASQSDDKTVII 186
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P ++L SGS + + +W+ R L+GH VK + G+ S S D T+ +
Sbjct: 127 SPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVII 186
Query: 227 WSVS 238
W S
Sbjct: 187 WRTS 190
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G +L+S + +++WD N + M+ GH V+ + S DG++ ++ D IK W
Sbjct: 295 GHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWD 354
Query: 233 VSQQRCVSTIRVHS-EAVWALIATDTFSHV-ISGGRDRLVIITELRNPENFMIVCEETSP 406
+ +ST V L D ++ ++G D+ ++ ++ E +
Sbjct: 355 TETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGA 414
Query: 407 ILKLCFTADQQGIWVSTSDSDVRCWK 484
+ + F + + S+ D +R W+
Sbjct: 415 VNTITFVDNNRRFVTSSDDKSLRVWE 440
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCD-NVKALVVSRDGTQCV 196
AG + +P G ++SG E WD ++C LK H + A + ++
Sbjct: 502 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVA 561
Query: 197 SGSSDGTIKLW 229
+ DG IK W
Sbjct: 562 TCGWDGLIKYW 572
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVSGSSDGTIKLW- 229
GT+L S S ++ L++W + L H D + A+ +S +G +GSSD IK+W
Sbjct: 177 GTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENG-DIYTGSSDQRIKVWR 235
Query: 230 ------SVSQQR---CVSTIRVHSEAVWALIATDTFSHVI-SGGRDRLVIITELRNPENF 379
+V ++R V+ + H+ + AL + T ++ SGG D +++ E + +
Sbjct: 236 KNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDI 295
Query: 380 MIV---CEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
++V T +L L +D + ++D VR WK
Sbjct: 296 VVVGMLRGHTESVLCLAVVSDI--LCSGSADKTVRLWK 331
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCV-STIRVHSEAVWALIATDTFSHV 319
H D V L +SRDGT S S D T+K+W + +C+ S H +A+ A +A +
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINA-VALSENGDI 222
Query: 320 ISGGRD-RLVIITELRNPEN 376
+G D R+ + + N EN
Sbjct: 223 YTGSSDQRIKVWRKNINEEN 242
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLM---KLKGHCDNVKALVVSRDGTQ 190
+GI A G++L SG ++ + VW+ + ++ L+GH ++V L V D
Sbjct: 260 SGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD-IL 318
Query: 191 CVSGSSDGTIKLW--SVSQQRCVSTIRVHSEAVWALI--------ATDTFSHVISGGRDR 340
C SGS+D T++LW S C++ + H V L A + H+ SGG D
Sbjct: 319 C-SGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDS 377
Query: 341 LVIITELRNP 370
V + ++ P
Sbjct: 378 QVKVWQVLVP 387
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 41 TMNPPGTV-LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
T NP + L S S + +++WD L GH + V +L S +G SGS D +
Sbjct: 505 TNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKS 564
Query: 218 IKLWSVSQQRCVST 259
I +WS+ + + V T
Sbjct: 565 IHIWSIKEGKIVKT 578
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGT---------QCVS 199
+P G++L S S + ++W+ + + + L+ H + + S G S
Sbjct: 457 DPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLAS 516
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENF 379
S D T+KLW + + + H E V++L + ++ SG D+ + I ++ +
Sbjct: 517 ASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGK-I 575
Query: 380 MIVCEETSPILKLCFTADQQGIWVSTSDSDV 472
+ I ++C+ + I +D+ V
Sbjct: 576 VKTYTGNGGIFEVCWNKEGNKIAACFADNSV 606
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWD-----------PRNCSRLM--KLKGHCD----NVKALVVS 175
+P ++L SGS + R+W RN + L+ KG + +V L +
Sbjct: 274 SPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWN 333
Query: 176 RDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIIT 355
+GT +GS DG ++W+++ + +ST+ H +++L ++++G DR ++
Sbjct: 334 GEGTLLATGSCDGQARIWTLNGE-LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVW 392
Query: 356 ELRNPE 373
+++ E
Sbjct: 393 DVKAEE 398
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N GT+L +GS + R+W N + L H + +L ++ G ++GS D T +
Sbjct: 333 NGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVV 391
Query: 227 WSVSQQRCVSTIRVHS 274
W V + HS
Sbjct: 392 WDVKAEEWKQQFEFHS 407
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 140 GHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWAL 292
GH V + G+ S S D T K+W++ Q V +R H++ ++ +
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
L+GH V A S + SGS D T ++WS+ +
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPE 296
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 44.8 bits (101), Expect = 6e-05
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLM-KLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+L SGS ++ + D R S + KL GH V L S D + SG +D + +W+
Sbjct: 269 ILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNH 328
Query: 239 QQRCVSTIRVHSEAVWALIATDTFSHVISGG---RDRLVIITELRNPENFMIVCEETSPI 409
Q+ + + H+ AV A+ + S +++ G DR + N N + + S +
Sbjct: 329 SQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTN-GNQLNSIDTGSQV 387
Query: 410 LKLCFTADQQGIWVST---SDSDVRCWKLPPLSTLTSET 517
L ++ + I VST S + + WK P +S + + T
Sbjct: 388 CNLAWSKNVNEI-VSTHGYSQNQIMLWKYPSMSKVATLT 425
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G+ + G++ ++VWD C R+ + GH + V++ + SGS D I +
Sbjct: 227 GSYISIGTSHGQVQVWDGTQCKRVRTMGGH--QTRTGVLAWNSRILSSGSRDRNILQHDI 284
Query: 236 S-QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPIL 412
Q VS + H V L + + SGG D +++ + + + + E T+ +
Sbjct: 285 RVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVK 344
Query: 413 KLCFTADQQGIWVS---TSDSDVRCW 481
+ ++ Q + S T+D +R W
Sbjct: 345 AITWSPHQSSLLASGGGTADRCIRFW 370
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
V G ++ + +W + S++ L GH V L S DG V+G+ D T++ W+V
Sbjct: 400 VSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFP 459
Query: 242 QRCVSTIRVHSEAVWAL 292
+ T V +W+L
Sbjct: 460 SVKMQT-PVKDTGLWSL 475
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Frame = +2
Query: 98 VWDPRNCSRLMKL--KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
+W N S++ KL G D+V ++ +R+G+ G+S G +++W +Q + V T+ H
Sbjct: 198 LWTASN-SKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGH 256
Query: 272 SEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI-VCEETSPILKLCFTADQQGIW 448
L + SG RDR ++ ++R +F+ + S + L ++ D + +
Sbjct: 257 QTRTGVLAWNSRI--LSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELA 314
Query: 449 VSTSDSDVRCW---KLPPLSTLTSET 517
+D+ + W P+ LT T
Sbjct: 315 SGGNDNQLLVWNNHSQQPILKLTEHT 340
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 113 NCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRV-HSEAVWA 289
+ S +++L GH ++ +V S DG++ VS S D + ++W + Q V + HS VW
Sbjct: 224 SASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWD 283
Query: 290 LIATDTFSHVISGGRD 337
+D S +++ G D
Sbjct: 284 CCISD--SLIVTAGED 297
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 113 NCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRV-HSEAVWA 289
+ S +++L GH ++ +V S DG++ VS S D + ++W + Q V + HS VW
Sbjct: 224 SASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWD 283
Query: 290 LIATDTFSHVISGGRD 337
+D S +++ G D
Sbjct: 284 CCISD--SLIVTAGED 297
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 44.8 bits (101), Expect = 6e-05
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNV---KALVVSRDGTQ 190
G + N G VLVSGS ++ + +W+ + SR + GHC+NV K + + D T
Sbjct: 56 GCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTI 115
Query: 191 CVSGSSDGTIKLWSVSQQRCVSTIRV--HSEAVWALIATDTFSHVI-SGGRDRLVIITEL 361
SG +DG ++L + + V T R+ H V+ L +V S G D V ++
Sbjct: 116 ITSG-ADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGEDGFVQHFDI 174
Query: 362 RNPENFMIVCEETSPILKLC 421
R+ M++ +SP + C
Sbjct: 175 RSNSATMVL--YSSPFTQGC 192
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 131 KLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS-VSQQRCVSTIRVHSEAVW 286
KL GH V A+ + G VSGS D I LW+ +S R +S H E V+
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVF 102
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWD--------PRNCSRLMKLKGHCDNVKALVVSRDGT 187
H A ++P G L + + ++VW+ + SR+M+LKGH V L S +
Sbjct: 243 HMAAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSE 302
Query: 188 QCVSGSSDGTIKLWSVS 238
Q ++ S DG+I++W+++
Sbjct: 303 QIITASKDGSIRVWNIN 319
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 125 LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
L LKGH D V L S DG + +DG I+++ +
Sbjct: 79 LNTLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKL 115
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
N G +L S + + +W N RL +GH V VSRD ++ ++GS+D T KL
Sbjct: 19 NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKL 78
Query: 227 WSVSQQRCVSTIRVHS 274
W V + + T + ++
Sbjct: 79 WDVKSGKELFTFKFNA 94
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLK----GHCDNVKALVVSRDGTQCVS 199
+ A P +VSG +KV+R+WD +L+K GH ++ +L + D + ++
Sbjct: 152 NRAVWGPLNQTIVSGGEDKVIRIWDAET-GKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 200 GSSDGTIKLWSV 235
GS D T KLW +
Sbjct: 211 GSLDKTAKLWDM 222
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +2
Query: 122 RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIAT 301
R + +KGH + L +R+G S + D T LW + T R H+ AVW +
Sbjct: 2 RPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVS 61
Query: 302 DTFSHVISGGRDRLVIITELRN 367
S +I+G D+ + ++++
Sbjct: 62 RDSSRLITGSADQTAKLWDVKS 83
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 317 VISGGRDRLVIITELRNPENFMIVCEETS---PILKLCFTADQQGIWVSTSDSDVRCWKL 487
++SGG D+++ I + + EE I LC AD + D + W +
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 488 PPLSTLTSET 517
L+ L + T
Sbjct: 223 RTLTLLKTYT 232
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
+ S E ++ VWD LM+ + H ++ SR + + VSGS D +K+W Q
Sbjct: 436 IASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQ 495
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ V I + + + +++ G D + +LRN + V +
Sbjct: 496 EASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYV 555
Query: 422 FTADQQGIWVSTSDSDVRCWKLP---PLSTLTSETYDQN 529
+ +++DS +R W + P+ T T ++N
Sbjct: 556 KFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKN 594
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCD--NVKALVVSRDGTQCVSGSSD 211
L S ST+ LR+WD ++ + +GH + N L V+ + C S +++
Sbjct: 563 LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNE 613
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVI 322
H D V L ++ + S S D TIK+W ++ +C+ +I H +AV ++++T T + V
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVST-TEAIVF 263
Query: 323 SGGRDRLVIITELRNPENF------MIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
SG D V + + + ++ S + L + + ++ +SD V W+
Sbjct: 264 SGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWE 323
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+L +GS K +RVW +N K + VKA+V+S G + +G DG I++W VS
Sbjct: 108 LLYTGSDSKNIRVW--KNLKEFSAFKCNSGLVKAIVIS--GEKIFTGHQDGKIRVWKVS 162
Score = 35.1 bits (77), Expect = 0.048
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVW--DPRNCSRLMKLKGHCDNVKALVVS--------RDGTQCV-SG 202
G+++ SGS +K + VW D + L L GH VK L V RD V SG
Sbjct: 348 GSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSG 407
Query: 203 SSDGTIKLWSVSQ 241
S D ++K+W VS+
Sbjct: 408 SLDKSVKVWGVSE 420
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
+++P + + + + WD + M KGH D + +V +Q ++GS DGT
Sbjct: 166 SVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTA 225
Query: 221 KLWSVSQQRCVSTI 262
++W +CV I
Sbjct: 226 RIWDCKTGKCVKVI 239
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 3/115 (2%)
Frame = +2
Query: 155 VKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGR 334
+ A+ V + + D W V + T + HS+ + +++ + S +++G
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 335 DRLVIITELRNPENFMIV-CEETSPILKLCFTA-DQQGIW-VSTSDSDVRCWKLP 490
D I + + + ++ ++ L++ A D W V ++ W LP
Sbjct: 222 DGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNLP 276
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Frame = +2
Query: 11 PRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLK---GHCDN-----VKAL 166
PR G T + + SGS++ ++R WD C + ++ G N + +L
Sbjct: 195 PRVTGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELCIWSL 254
Query: 167 VVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
+ R G VSG S G+++ W + H V AL A+ + + V S G D V
Sbjct: 255 LSLRYGV-LVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQV 313
Query: 347 IITEL 361
I+ +L
Sbjct: 314 ILYKL 318
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
VLVSG + ++ WD ++ + L H +V AL S + S +DG + L+ +S
Sbjct: 261 VLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLS 319
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 155 VKALVVSRDGTQCVSGSSDGTIKLWSVS 238
V AL S DG+Q + DG+++LW VS
Sbjct: 16 VVALATSADGSQVAAAREDGSLELWLVS 43
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRD-GTQCVSGSSDGTIKLWSVSQ 241
L S + ++++WD + H ++ S T+ SGS D ++KLW++++
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINE 828
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVIS-GGRDRLVIITELRNPENFMIVCEETSPILKL 418
+ C+ TIR + V + + SH+++ G D +LRN + + +
Sbjct: 829 RNCLGTIR-NIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSY 887
Query: 419 CFTADQQGIWVSTSDSDVRCWKL 487
D + + +++D+ ++ W L
Sbjct: 888 AKFLDNETLVTASTDNTLKLWDL 910
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +2
Query: 80 TEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVST 259
+ K LR + P +C ++ KGH V ++ G SGS+DG++++W V RC+
Sbjct: 404 SRKDLRPY-PNSC--YLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK- 459
Query: 260 IRVHSEAVWALIATDTFSHV----ISGGRDRLVIITELRNPENFMIVCE 394
+ EA+ +A + S + ++ GRD + TEL E I E
Sbjct: 460 VWQFDEAIMC-VAWNPLSRLPVLAVAMGRDLFFLNTELGTDEEQEITKE 507
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Frame = +2
Query: 110 RNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWA 289
R ++K++ H D V L ++ D SGS D T+K+W +S +C+ +I H +AV
Sbjct: 234 RRRKNVLKIR-HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAV-N 291
Query: 290 LIATDTFSHVISGGRDRLVII--TELRNPEN----FMIVCEETSPILKLCFTADQQGIWV 451
+ + V +G D + + E++ E ++ ++ + + L ++
Sbjct: 292 TVVSGFDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYC 351
Query: 452 STSDSDVRCWK 484
+SD V W+
Sbjct: 352 GSSDGTVNFWE 362
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
++N +L SGS +K L+VW + L ++ H D V +V D +GS+DGT+
Sbjct: 252 SLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDL-VFTGSADGTL 310
Query: 221 KLWSVSQQR------CVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
K+W Q V + AV AL T + V G D V
Sbjct: 311 KVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTV 358
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 68 VSGSTEKVLRVWDPRNCSRLMK-LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+SGS + R+WD R SR ++ GH +V + DG + +GS DGT +L+ +
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 245 RCVSTIRVHSEAVWALIATDTFS 313
+ + H + + + FS
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFS 303
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
L+GH V +L + + + VS S DG + +W+ + I++ V +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 314 HVISGGRDRLVIITEL 361
V GG D + I L
Sbjct: 121 SVACGGLDSVCSIFSL 136
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 68 VSGSTEKVLRVWDPRNCSRLMK-LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+SGS + R+WD R SR ++ GH +V + DG + +GS DGT +L+ +
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Query: 245 RCVSTIRVHSEAVWALIATDTFS 313
+ + H + + + FS
Sbjct: 219 HQLQVYQPHGDGENGPVTSIAFS 241
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +2
Query: 56 GTVLVSG-STEKVLRVWDPRNCSRLMKL----KGHCDNVKALVVSRDGTQCVSGSSDGTI 220
G +L +G ++ VWD ++ L H + + L +S DG+ +GS D +
Sbjct: 244 GRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNL 303
Query: 221 KLWSVSQQRCV 253
K+W+ R V
Sbjct: 304 KIWAFGGHRRV 314
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 68 VSGSTEKVLRVWDPRNCSRLMK-LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+SGS + R+WD R SR ++ GH +V + DG + +GS DGT +L+ +
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 245 RCVSTIRVHSEAVWALIATDTFS 313
+ + H + + + FS
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFS 303
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +2
Query: 56 GTVLVSG-STEKVLRVWDPRNCSRLMKL----KGHCDNVKALVVSRDGTQCVSGSSDGTI 220
G +L +G ++ VWD ++ L H + + L +S DG+ +GS D +
Sbjct: 306 GRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNL 365
Query: 221 KLWSVSQQRCV 253
K+W+ R V
Sbjct: 366 KIWAFGGHRRV 376
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
L+GH V +L + + + VS S DG + +W+ + I++ V +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 314 HVISGGRDRLVIITEL 361
V GG D + I L
Sbjct: 121 SVACGGLDSVCSIFSL 136
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/69 (26%), Positives = 37/69 (53%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+L + + + V+R++D + + +GH D + L S DG +S S DG++++W V
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVIL 588
Query: 242 QRCVSTIRV 268
+ + + V
Sbjct: 589 AKQIDGVHV 597
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
VLV GS E L++W+ L + KG +V + V S G +DG I + ++
Sbjct: 154 VLV-GSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKL 212
Query: 242 QRCVSTIRVHSE-AVWAL-IATDTFSHVISGGRDRLVIITELRNPENFMIVCE-ETSPIL 412
+ T S AV AL +TD + SGG ++ I L ++ + S I+
Sbjct: 213 DEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSII 272
Query: 413 KLCFTADQQGIWVSTSDSDVRCW 481
L F A++ + +++D+ ++ W
Sbjct: 273 SLNFLANEPVLMSASADNSLKMW 295
Score = 27.9 bits (59), Expect = 7.3
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRC-------VSTIRVHSEAVWALIAT 301
H V + T +S G +K+W ++ S +++ V L+AT
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLAT 532
Query: 302 DTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
VI RL + L+ F T I LCF+ D + + S+ D +R W
Sbjct: 533 VADDFVI-----RLYDVVTLKMVREFR---GHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL-VVSRDGTQCVSGSSDGTIKLWSVSQ 241
+ S + + V+++WD + ++K H V ++ + S D T SGS DGT VS
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT----GVS- 653
Query: 242 QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLC 421
+ TI+ + +D+ + G D V +LRNP+ + S +
Sbjct: 654 ---IGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYV 710
Query: 422 FTADQQGIWVSTSDSDVRCWKL 487
D + S++D+ ++ W L
Sbjct: 711 KFVDSSTLVSSSTDNTLKLWDL 732
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = +2
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRD 337
+Q S + DG +++W V++ + V+ ++ H + VW++ + +++ G D
Sbjct: 597 SQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSD 647
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCS-RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G L GS + + +D RN L + GH V + V D + VS S+D T+KLW
Sbjct: 673 GRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTV-SYVKFVDSSTLVSSSTDNTLKLWD 731
Query: 233 VS 238
+S
Sbjct: 732 LS 733
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/66 (24%), Positives = 38/66 (57%)
Frame = +2
Query: 38 ATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
A +P G +L +G+ + ++++WD ++ + + K GH + ++ S +G + + DG
Sbjct: 360 AAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG- 418
Query: 218 IKLWSV 235
++LW +
Sbjct: 419 VRLWDL 424
Score = 35.1 bits (77), Expect = 0.048
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
V+ +G + ++D + L L GH V ++ D ++ SSD T+++W S+
Sbjct: 236 VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSE 295
Query: 242 QRCVS---TIRVHSEAVWALIATDTFSHVISGGRD 337
+ T++ HS V A+ T + +S D
Sbjct: 296 DGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLD 330
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Frame = +2
Query: 110 RNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWA 289
R ++K++ H D V L ++ + SGS D T+K+W +S +C+ +I+ H +A+
Sbjct: 238 RRRKNVLKIR-HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAI-N 295
Query: 290 LIATDTFSHVISGGRDRLVII--TEL--RNPENFM--IVCEETSPILKLCFTADQQGIWV 451
+A + +G D + + EL + ++F+ ++ ++ + + L ++
Sbjct: 296 TVAAGFDDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYC 355
Query: 452 STSDSDVRCWK 484
+SD V W+
Sbjct: 356 GSSDGTVNFWE 366
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
++N +L SGS +K L+VW + L ++ H D + + D +GS+DGT+
Sbjct: 256 SLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDL-LFTGSADGTL 314
Query: 221 KLWSVSQQR------CVSTIRVHSEAVWALIATDTFSHVISGGRDRLV 346
K+W Q V+ + AV AL T + V G D V
Sbjct: 315 KVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTV 362
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
H ++ G +L +GS K +RVW ++ K VKA+V++ D + +G D
Sbjct: 140 HVYSLAASGDLLFTGSDSKNIRVW--KDLKDHTGFKSTSGLVKAIVITGDN-RIFTGHQD 196
Query: 212 GTIKLWSVSQQRCVSTIRVHS 274
G I++W S++R R+ S
Sbjct: 197 GKIRVWRGSKRRTGGYSRIGS 217
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVS-RDGTQCVSGSSDGTIKLWSVSQ 241
L S + V+++WD + H ++ S D T+ VSGS D ++KLWS+++
Sbjct: 781 LASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINE 840
Query: 242 QRCVSTIRVHSEAVWALIATDTFS-HVIS-GGRDRLVIITELRNPENFMIVCEETSPILK 415
+R + TI S A + ++S H+++ G D V +LR + +
Sbjct: 841 KRSLGTI--WSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVS 898
Query: 416 LCFTADQQGIWVSTSDSDVRCWKL 487
D + I +++D+ ++ W L
Sbjct: 899 YVKFMDSETIVSASTDNSLKLWNL 922
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 131 KLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTF 310
+L GH + +L + D T SGS D ++++W S +CV T+R HS+ VW L +T
Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETT 308
Query: 311 SHVISG 328
SG
Sbjct: 309 LASTSG 314
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
T + SGS + +R+WD R+ + +K H D V L SGS + +W VS
Sbjct: 268 TSIFSGSWDMSVRIWD-RSSMKCVKTLRHSDWVWGLAPHETTLASTSGSD---VYIWDVS 323
Query: 239 QQRCVSTI-RVHSEAVWALIATDTFSHVISGGRDRLVIITELR--NPENFMIVCEE---- 397
+ ++ I H ++L + T + +GG D + + E+R E +++ +
Sbjct: 324 SETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETSVVLISQWMPH 383
Query: 398 TSPILKLCF 424
TSP+ L F
Sbjct: 384 TSPVYSLSF 392
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 137 KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS- 313
+GH D+V L S+ +S S D T++LW++S Q C+ HS+ V +
Sbjct: 510 QGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDR 567
Query: 314 HVISGGRDRLVIITELRNPENFMIVCEET-SPILKLCFTADQQGIWVSTSDSDVRCW 481
+ ISG D V + + P+ ++ + + C+T D QG+ V + R +
Sbjct: 568 YFISGSLDAKVRVWSI--PDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMY 622
Score = 31.9 bits (69), Expect = 0.45
Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Frame = +2
Query: 68 VSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS--- 238
+SGS + +RVW + + H + V + + DG + GS G+ +++S S
Sbjct: 570 ISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYSASDNK 628
Query: 239 -QQRCVSTI-----RVHSEAVWAL-IATDTFSHVISGGRDRLVIITELRNPENFMIVCEE 397
QQ+ + + H + + + S V+ D + + + + N +
Sbjct: 629 LQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVDGTDLVNKLKGFRN 688
Query: 398 TSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQ 556
TS + TAD + + ++ DS V WK ++ S + + + N Y+
Sbjct: 689 TSSQISASITADGKYVVSASEDSHVYIWKYESPASRPSRSNNNKNVTVTNSYE 741
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVS 199
G + P ++ ++E + ++D N ++ + + KGH NV ++ S +G + V+
Sbjct: 633 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNG-ELVA 691
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH-VISGGRDRLVIITELRNPEN 376
S+ +KLWS+S C+ + +++ ++ ++ GG + + + N
Sbjct: 692 SVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN--K 749
Query: 377 FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
M V I L + + ++ D V+ WK
Sbjct: 750 CMTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 785
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G +L S +K + +W+ + H + + + TQ + S D TIK+W
Sbjct: 520 GKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDA 579
Query: 236 SQQ-RCVSTIRVHSEAVWAL 292
S + TI H+ V ++
Sbjct: 580 SDPGYFLRTISGHAAPVMSI 599
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVS 199
G + P ++ ++E + ++D N ++ + + KGH NV ++ S +G + V+
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNG-ELVA 693
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH-VISGGRDRLVIITELRNPEN 376
S+ +KLWS+S C+ + +++ ++ ++ GG + + + N
Sbjct: 694 SVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN--K 751
Query: 377 FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
M V I L + + ++ D V+ WK
Sbjct: 752 CMTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G +L S +K + +W+ + H + + + TQ + S D TIK+W
Sbjct: 522 GKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDA 581
Query: 236 SQQ-RCVSTIRVHSEAVWAL 292
S + TI H+ V ++
Sbjct: 582 SDPGYFLRTISGHAAPVMSI 601
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVS 199
G + P ++ ++E + ++D N ++ + + KGH NV ++ S +G + V+
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNG-ELVA 693
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH-VISGGRDRLVIITELRNPEN 376
S+ +KLWS+S C+ + +++ ++ ++ GG + + + N
Sbjct: 694 SVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN--K 751
Query: 377 FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
M V I L + + ++ D V+ WK
Sbjct: 752 CMTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G +L S +K + +W+ + H + + + TQ + S D TIK+W
Sbjct: 522 GKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDA 581
Query: 236 SQQ-RCVSTIRVHSEAVWAL 292
S + TI H+ V ++
Sbjct: 582 SDPGYFLRTISGHAAPVMSI 601
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVS 199
G + P ++ ++E + ++D N ++ + + KGH NV ++ S +G + V+
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNG-ELVA 693
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH-VISGGRDRLVIITELRNPEN 376
S+ +KLWS+S C+ + +++ ++ ++ GG + + + N
Sbjct: 694 SVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN--K 751
Query: 377 FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
M V I L + + ++ D V+ WK
Sbjct: 752 CMTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G +L S +K + +W+ + H + + + TQ + S D TIK+W
Sbjct: 522 GKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDA 581
Query: 236 SQQ-RCVSTIRVHSEAVWAL 292
S + TI H+ V ++
Sbjct: 582 SDPGYFLRTISGHAAPVMSI 601
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVS 199
G + P ++ ++E + ++D N ++ + + KGH NV ++ S +G + V+
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNG-ELVA 693
Query: 200 GSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH-VISGGRDRLVIITELRNPEN 376
S+ +KLWS+S C+ + +++ ++ ++ GG + + + N
Sbjct: 694 SVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN--K 751
Query: 377 FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
M V I L + + ++ D V+ WK
Sbjct: 752 CMTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G +L S +K + +W+ + H + + + TQ + S D TIK+W
Sbjct: 522 GKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDA 581
Query: 236 SQQ-RCVSTIRVHSEAVWAL 292
S + TI H+ V ++
Sbjct: 582 SDPGYFLRTISGHAAPVMSI 601
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = +2
Query: 8 DPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGT 187
D R GI H + G V +GS + ++ W ++ S L + GH V LVV +G
Sbjct: 583 DWRYTGI-HALAYSEYGHVY-TGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVV-NGV 639
Query: 188 QCVSGSSDGTIKLWSVSQQRCVSTI 262
SGS DGT++LWS+S ++ +
Sbjct: 640 -LYSGSWDGTVRLWSLSDNSLLTVL 663
Score = 34.7 bits (76), Expect = 0.064
Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 9/132 (6%)
Frame = +2
Query: 140 GHCDNVKALVVSRDGTQ--CVSGSSDGTIKLWSVSQQRCVSTIRVHSEAV-WA-----LI 295
GH D V AL+ +GT+ CVSG G I +WS + +R E W +
Sbjct: 534 GHQDKVMALI-HIEGTEPVCVSGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTGIHAL 592
Query: 296 ATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTS-DSDV 472
A + HV +G D + L++ + S + L G+ S S D V
Sbjct: 593 AYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVV---NGVLYSGSWDGTV 649
Query: 473 RCWKLPPLSTLT 508
R W L S LT
Sbjct: 650 RLWSLSDNSLLT 661
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +2
Query: 155 VKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGR 334
+ AL S G +GS D TIK WS+ + T+ H V L+ + + SG
Sbjct: 589 IHALAYSEYG-HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVN--GVLYSGSW 645
Query: 335 DRLVIITELRNPENFMIVCEETSPIL 412
D V + L + ++ EET I+
Sbjct: 646 DGTVRLWSLSDNSLLTVLGEETPGII 671
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCV 253
G T+ L +W + ++ +L GH V + S DG S + D T++LW+V +
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPK 390
Query: 254 STIRVHSEAVWALIATDTFSHV 319
+T + S+ TD F+HV
Sbjct: 391 TTKKAASKKY-----TDPFAHV 407
Score = 34.7 bits (76), Expect = 0.064
Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR-------LMKLKGHCDNVKALVVSRDGTQCVS---GS 205
G L SG + V+ +WD R+ + L + + H V+AL ++ G
Sbjct: 230 GKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGV 289
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVIS--GGRDRLVIITELRNPENF 379
DG IK W+ C++++ S+ V +L+ + + ++S G + + + +
Sbjct: 290 GDGKIKFWNTHTGACLNSVETGSQ-VCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKM 348
Query: 380 MIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL---PPLST--LTSETYDQNSYNTN 544
+ TS +L + + D + + D +R W + PP +T S+ Y + N
Sbjct: 349 AELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTDPFAHVN 408
Query: 545 NV 550
++
Sbjct: 409 HI 410
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 98 VWDPRNCS--RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
+WD + S +L+ + V ++ ++DG G + ++LW R V T+R
Sbjct: 116 LWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGG 175
Query: 272 SEAVWALIATDTFSHVI-SGGRDRLVIITELR 364
E+ +A + +H++ +GG D ++ ++R
Sbjct: 176 HESRVGSLAWN--NHILTTGGMDGKIVNNDVR 205
Score = 27.5 bits (58), Expect = 9.6
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKG-HCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G L G +++WD + ++ L+G H V +L + +G DG I
Sbjct: 146 GLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWNNH--ILTTGGMDGKIVNND 203
Query: 233 VS-QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRN 367
V + V T H+E V L +++ + SGG D +V I + R+
Sbjct: 204 VRIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRS 249
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +2
Query: 140 GHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHV 319
GHC V +L + SGS DGT+ +W+ + + + H + ++ A V
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGR-ERV 319
Query: 320 ISGGRDRLVIITE--LRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+S GRDR + + + + PE+ ++ + + C + + + + W +
Sbjct: 320 LSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSIALWSI 377
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 92 LRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
LRV D ++ + + H +V + +S D ++ S S DGTI W VS
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVS 175
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
T S + + RVWD R ++ +GH V ++ S +G SG D ++W +
Sbjct: 143 TFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR 202
Query: 239 QQRCVSTIRVHSEAV 283
++ + I H V
Sbjct: 203 MRKLLYIIPAHVNLV 217
Score = 41.1 bits (92), Expect = 7e-04
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVSRDGTQCV-SGSSDG 214
+++ G +LV+ S V ++W+ P+ ++++ LKGH ++V +V S +C+ + S+D
Sbjct: 70 SLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDR 129
Query: 215 TIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCE 394
T K+W T+ TF S G D L + +LR N +I
Sbjct: 130 TEKIWKTD-----GTL------------LQTFK--ASSGFDSLARVWDLRTARNILIFQG 170
Query: 395 ETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+L + F+ + + D+ R W L
Sbjct: 171 HIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVS 238
+L+S S +K +R+WD +KL H D V + S D +SGS D I++WS+
Sbjct: 519 LLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQ 577
Query: 239 QQRCVSTIRVHSEAVWALIATD 304
+ V +H A D
Sbjct: 578 DRHVVEWSDLHEMVTAACYTPD 599
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 260 IRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPE 373
I+ H AVW + + ++ SGG DR++ + E++ E
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECE 437
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 53 PGTVLVSGSTEKVLRVWDPRNCSRLMK-LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
P VLV+ + ++ R+ D K + C + A S+DG + S D + LW
Sbjct: 652 PSEVLVTSADSRI-RILDGSEVIHKFKGFRNTCSQLSASY-SQDGKYIICASEDSQVYLW 709
Query: 230 SVSQQRCVSTIRVHS 274
R ST+ S
Sbjct: 710 KNDFHRTRSTLTTQS 724
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
+ S S + +R+WD + + + GH V+ L S DG VS +D T++LW+V
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNC--SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
+P G V+GS ++ +R++ P N SR + V + S D T +SGS D +
Sbjct: 288 SPTGREFVTGSYDRSVRIF-PYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNL 346
Query: 221 KLWSVSQQRCVSTI 262
+LW + I
Sbjct: 347 RLWKAKASEQLGVI 360
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/171 (21%), Positives = 68/171 (39%)
Frame = +2
Query: 5 VDPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDG 184
VD IR ++ T+L S + +R+WD R+ + L+ V + VS+DG
Sbjct: 141 VDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDG 199
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELR 364
+ ++ + T+K W + V + + A + + ++GG D V + +
Sbjct: 200 -RYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFY 258
Query: 365 NPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSET 517
E P+ + FT + D +R W+ P + +ET
Sbjct: 259 TGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEENET 309
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD-GTIKLWSVS 238
L++G EK+LRV+D R + ++ +++ L +S +D G ++LW V
Sbjct: 117 LLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVR 176
Query: 239 QQRCVSTIRVHSEAVWALIATD 304
+ V T+ S A ++ D
Sbjct: 177 SGKIVQTLETKSPVTSAEVSQD 198
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 2/148 (1%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
+ P G L+S S + + + + +GH V + + + + S S+D + K
Sbjct: 27 ITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAK 86
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL-RNPENFMIVCEET 400
LW + + H V A ++ +++GG ++++ + ++ R V +
Sbjct: 87 LWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP 145
Query: 401 SPILKLCFTADQQGIWVSTSD-SDVRCW 481
I L + Q I S +D VR W
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLW 173
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/171 (21%), Positives = 68/171 (39%)
Frame = +2
Query: 5 VDPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDG 184
VD IR ++ T+L S + +R+WD R+ + L+ V + VS+DG
Sbjct: 141 VDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDG 199
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELR 364
+ ++ + T+K W + V + + A + + ++GG D V + +
Sbjct: 200 -RYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFY 258
Query: 365 NPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSET 517
E P+ + FT + D +R W+ P + +ET
Sbjct: 259 TGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEENET 309
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD-GTIKLWSVS 238
L++G EK+LRV+D R + ++ +++ L +S +D G ++LW V
Sbjct: 117 LLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVR 176
Query: 239 QQRCVSTIRVHSEAVWALIATD 304
+ V T+ S A ++ D
Sbjct: 177 SGKIVQTLETKSPVTSAEVSQD 198
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 2/148 (1%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
+ P G L+S S + + + + +GH V + + + + S S+D + K
Sbjct: 27 ITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAK 86
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL-RNPENFMIVCEET 400
LW + + H V A ++ +++GG ++++ + ++ R V +
Sbjct: 87 LWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP 145
Query: 401 SPILKLCFTADQQGIWVSTSD-SDVRCW 481
I L + Q I S +D VR W
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLW 173
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
H ++ G +L +GS K +RVW +N K +KA+V+ G + +G D
Sbjct: 127 HIYSLAASGDLLYTGSDSKNIRVW--KNLKEHAGFKSSSGLIKAIVIF--GDRIFTGHQD 182
Query: 212 GTIKLWSVSQQR 247
G I++W VS+++
Sbjct: 183 GKIRIWKVSKRK 194
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVI 322
H D V +L + + S S D TIK+W ++ +C+ +I H +A+ + + + V
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINS-VMSGFDDLVF 292
Query: 323 SGGRDRLVII--TELRNPEN----FMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
+G D V + EL+ ++ ++ + + L + ++ +SD V W+
Sbjct: 293 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWE 352
Score = 31.5 bits (68), Expect = 0.59
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 20/83 (24%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVW--DPRNCSR--LMKLKGHCDNVKALVVSRD-----GTQC----- 193
G +L+SGS +K + VW DP + S L L GH VK L V + G +
Sbjct: 377 GNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEERACHQGAKASVAEG 436
Query: 194 ------VSGSSDGTIKLWSVSQQ 244
SGS D ++K+W VS++
Sbjct: 437 DRKWIIYSGSLDKSVKVWRVSER 459
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 10/158 (6%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRN--CS-RLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
++P T L+SG +RVWD R CS L+ G +++L V DGT V+ + G
Sbjct: 133 LHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVG--TPIRSLTVMWDGTMVVAANDRG 190
Query: 215 TIKLWSVSQQRCVST-------IRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPE 373
T +W +R T ++ H+ + + + ++ + D+ V I L +
Sbjct: 191 TCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFK 250
Query: 374 NFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
++ + F+ D + + ++SD+ R W +
Sbjct: 251 LEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSM 288
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
++P L + S++K +++W+ L GH V S DG V+ SSD T +
Sbjct: 225 LSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTAR 284
Query: 224 LWSVSQQRCVSTIRVHSEA 280
LWS+ + + H +A
Sbjct: 285 LWSMRAGKEEMVYQAHRKA 303
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 143 HCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVI 322
H NV A+ G SGS DG++K+W + + C R S V ++ + +I
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVS-PVNTVVLHPNQTELI 141
Query: 323 SGGRDRLVIITELR 364
SG ++ + + +LR
Sbjct: 142 SGDQNGNIRVWDLR 155
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWD--PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
G ++ SGS + +++WD R C R + V +V+ + T+ +SG +G I++W
Sbjct: 96 GHMMYSGSEDGSVKIWDLRVRECQREFR---SVSPVNTVVLHPNQTELISGDQNGNIRVW 152
Query: 230 SVSQQRC 250
+ C
Sbjct: 153 DLRADLC 159
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR--------LMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
GT++V+ + VW C R L KL+ H ++ ++S + SSD
Sbjct: 180 GTMVVAANDRGTCYVWRSL-CERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSD 238
Query: 212 GTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
T+K+W++ + + H VW + ++++ D + +R + M+
Sbjct: 239 KTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMV 296
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCV 253
G T+ L +W + ++ +L GH V + S DG S + D T++LW+V +
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPK 407
Query: 254 STIRVHSEAVWALIATDTFSHV 319
+T + S+ T+ F+HV
Sbjct: 408 TTKKAASKKY-----TEPFAHV 424
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +2
Query: 98 VWDPRNC--SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
+WD +C S+L+ + V ++ ++DG G + +++W R V T+R
Sbjct: 134 LWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGG 193
Query: 272 SEAVWALIATDTFSHVI-SGGRDRLVIITELR 364
E+ +A + +H++ +GG D ++ ++R
Sbjct: 194 HESRVGSLAWN--NHILTTGGMDGKIVNNDVR 223
Score = 32.3 bits (70), Expect = 0.34
Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWD----PRNCSR--LMKLKGHCDNVKALVVSRDGTQCVS---GSS 208
G L SG + V+ +WD N +R L + + H V+AL ++ G
Sbjct: 248 GKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVG 307
Query: 209 DGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVIS--GGRDRLVIITELRNPENFM 382
DG I W+ C++++ S+ V +L+ + + ++S G + + + +
Sbjct: 308 DGKINFWNTHTGACLNSVETGSQ-VCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMA 366
Query: 383 IVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL---PPLST--LTSETYDQNSYNTNN 547
+ TS +L + + D + + D +R W + PP +T S+ Y + + N+
Sbjct: 367 ELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNH 426
Query: 548 V 550
+
Sbjct: 427 I 427
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPR---NCSRLMKLKGHCDNVKALVVSRDG-TQCVSGSSDGTIKLW 229
++ +G ++ +LRVWDPR + + + H + A + +S S DG I LW
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLW 386
Query: 230 SVSQQRCVSTIRVHSEAVWALIATDTF--SHVISGGRD 337
+ +S I H++ V ++ D + V+SGG D
Sbjct: 387 DLRTAWPLSVIDTHNDKV---LSADWWKGESVVSGGAD 421
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
L+GH +V+++ + G S S D TI LW+ ++
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNE 236
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKG-----HCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+L S S + +R+W+ + SR K H V++ S G + S DGT +
Sbjct: 41 ILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGI 100
Query: 227 WSV--SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
W S+ C+ST+ H V ++ + S + + RD+ V I E+
Sbjct: 101 WKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEV 147
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSR--LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTI 220
+P G +L + S + +W + L+GH + VK++ + G+ + S D ++
Sbjct: 83 SPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSV 142
Query: 221 KLWSV---SQQRCVSTIRVHSEAV 283
+W V ++ C + + H++ V
Sbjct: 143 WIWEVLEGNEYDCAAVLTGHTQDV 166
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 53 PGTVLVSGST--EKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
P TV+ S + LR+ + L KGH D V +L + G +SGS D T+ L
Sbjct: 87 PTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLL 146
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRL 343
W ++C +RV A + GG R+
Sbjct: 147 WDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGGYIRM 185
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 53 PGTVLVSGST--EKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
P TV+ S + LR+ + L KGH D V +L + G +SGS D T+ L
Sbjct: 84 PTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLL 143
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRL 343
W ++C +RV A + GG R+
Sbjct: 144 WDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGGYIRM 182
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
L+S S +K +R+WD + +K+ H D V + + D +SGS D +++WS+
Sbjct: 482 LLSSSMDKTVRLWD-LSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPD 540
Query: 242 QRCVSTIRVHSEAVWALIATD 304
+ V +H A D
Sbjct: 541 HQVVDWNDLHEMVTAACYTPD 561
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMK----LKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
G +++SGS + + +VWD R K L GH + V + DG +S D TIK
Sbjct: 284 GNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIK 343
Query: 224 LWSV 235
LW +
Sbjct: 344 LWDI 347
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 AAGIRHEATM--NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQ 190
++GIR + + G ++ G + +++ L GHC V L +S D
Sbjct: 2623 SSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNF 2682
Query: 191 CVSGSSDGTIKLWSV 235
V+GS D T+ LW +
Sbjct: 2683 LVTGSRDSTVLLWRI 2697
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/103 (19%), Positives = 46/103 (44%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
+N T + SG + +++WD R S + H D + + + D + V S DGT+
Sbjct: 44 INVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLS 103
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
+ ++ + S + + +++ VI G ++ +++
Sbjct: 104 VCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLL 146
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/103 (19%), Positives = 46/103 (44%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
+N T + SG + +++WD R S + H D + + + D + V S DGT+
Sbjct: 101 INVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLS 160
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
+ ++ + S + + +++ VI G ++ +++
Sbjct: 161 VCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLL 203
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEA--VWALIATDT 307
L+GH +V + + +GS+DG +++W Q R VS+ HS A V A+ A+
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 308 FSH--VISGGRDRLV 346
+IS GRD V
Sbjct: 73 LGEDKIISQGRDGTV 87
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 194 VSGSSDGTIKLWSVSQQRC-VSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRN 367
++G DG+I LW + + +++++ HSE V +L + ISGG D +++ L +
Sbjct: 235 LAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNH 293
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Frame = +2
Query: 8 DPRAA--GIRH---EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGH--CDNVKAL 166
DP A G RH + + +P ++L +GS + LR+WD + H + V A+
Sbjct: 8 DPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAV 67
Query: 167 VVS--RDGTQCVSGSSDGTIKLWSV 235
S + +S DGT+K W +
Sbjct: 68 AASPWLGEDKIISQGRDGTVKCWDI 92
Score = 31.5 bits (68), Expect = 0.59
Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCS-RLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
+++G + + +WD RN L +K H + V +L V+ +SG +D I +++++
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNH 293
Query: 242 QRCVSTIR----VHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPI 409
TIR + V + G D + + R I+ +
Sbjct: 294 STGSCTIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATC 353
Query: 410 LKLCFTADQQGIWVSTSDSDVRCWKL-PPLSTL 505
+ ++ D + + ++ D+ V WKL PP +L
Sbjct: 354 NAVSYSPDCELMASASEDATVALWKLYPPHKSL 386
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRN--CSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
+L SG ++ +RVW+ + L +K H V +S G +SGS+D TI++W +
Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
Query: 236 --SQQRCVSTIRVHSEAVWALIATDTFSHVISGG 331
+ C I+ +++ L A VI+ G
Sbjct: 925 VKGKLECAEVIKT-KDSIRKLEAFGNMIFVITKG 957
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCV----SGSSDGTIKLW 229
+ VS ST V +++ P + KGH D V + S D S SSDGTI+ W
Sbjct: 56 IAVSLSTNTV-KLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSW 114
Query: 230 SVSQQRCVSTIRV-HSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETS 403
+ VS I + + +++ ++++GG V++ + RN + + C E S
Sbjct: 115 DTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK--QVACLEES 171
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
L+S S ++ +R+W + +++ H V + + D +SGS DG +++W VSQ
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQ 436
Query: 242 QRCV 253
R V
Sbjct: 437 FRVV 440
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +2
Query: 71 SGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRC 250
+G + + L ++D R L KGH D V +L +S +SGS D +++LW + C
Sbjct: 92 TGESLRYLSMYDNRI---LRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 148
Query: 251 VSTIRVHSEAVWALIATD-TFSHVISGGRDRLVIITEL-RNPENFMIVCEETSPILKLCF 424
+ + A F+ + GG +L + P + +V +T+ + + F
Sbjct: 149 QGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKF 208
Query: 425 TADQQGIWVSTSDSDV 472
+ D + + ++T+++++
Sbjct: 209 SNDGKSMLLTTTNNNI 224
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 35 EATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKAL 166
EAT P G ++SGS + L W+ N S + + + + V L
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCL 292
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPR--NCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
M+P +SGS ++ +R+WD R C ++ L+G A+ + G G
Sbjct: 122 MSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGR----PAVAYDQQGLVFAIAMEGGA 177
Query: 218 IKLW 229
+KL+
Sbjct: 178 VKLF 181
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 38.3 bits (85), Expect = 0.005
Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 6/192 (3%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMK--LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+ S S++ + V D + S L L+ H D V +L +S D T SGS D +KL+
Sbjct: 33 VTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFP 92
Query: 239 QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKL 418
+ I + + L + S + + G D + + + ++ P+ L
Sbjct: 93 SGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGL 152
Query: 419 CFTADQQGIWVSTSDSDVRCWKLP--PLSTLTSETYDQNSYNTN--NVYQRMPLHNIPGG 586
F + + + + V CW+L +S +NT+ N+ + P
Sbjct: 153 DFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAV 212
Query: 587 PAIRHFTVLNDK 622
P +R+ V+ D+
Sbjct: 213 PGLRNDVVMYDR 224
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 GTQCV-SGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSH-VISGGRDRLVIIT 355
G C+ + S D TIK+W V + +C + H+ V ++ + T S ++SG RD +
Sbjct: 139 GDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALW 198
Query: 356 ELR 364
+LR
Sbjct: 199 DLR 201
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQ-CVSGSSDGTIKLWSVSQ 241
L++ S ++ ++VWD L GH VK++ + VSGS DG LW +
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL-- 200
Query: 242 QRCVST 259
RC S+
Sbjct: 201 -RCKSS 205
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 167 VVSRDGTQCVSGSSDGTIKLWSVSQ 241
++S DG +SGSSDG +W V++
Sbjct: 345 MISPDGEYVLSGSSDGNAYIWQVNK 369
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLK---GHCDNVKALVVSRDGTQCVSGSSDGTI 220
P G+ ++ S++K ++D + C L +L GH ++ A+ S DG Q ++ S+D +
Sbjct: 197 PDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSA 256
Query: 221 KLWSVS 238
K+W +S
Sbjct: 257 KIWDIS 262
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 155 VKALVVSRDGTQCVSGSSDGTIKLWSVS 238
V AL V+ DGT+ V G DG + L+S++
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSIN 477
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +2
Query: 260 IRVHSEAVWALIAT-DTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQ 436
+R H IA+ D V++ G D + +LR + I+ T P+ LCF
Sbjct: 11 LRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKTGN 70
Query: 437 QGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQ 556
+ I ++ ++++ + + LS + + + +YN + V Q
Sbjct: 71 ENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQ 110
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +2
Query: 260 IRVHSEAVWALIAT-DTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQ 436
+R H IA+ D V++ G D + +LR + I+ T P+ LCF
Sbjct: 11 LRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKTGN 70
Query: 437 QGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQ 556
+ I ++ ++++ + + LS + + + +YN + V Q
Sbjct: 71 ENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQ 110
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCV 253
G T+ L +W + S++ +L GH V + S +G S + D ++LW+V +
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPK 421
Query: 254 STIRVHSEAVWALIATDTFSHVIS 325
+T + S+ L FSHV S
Sbjct: 422 TTKKAASKNYLEL-----FSHVNS 440
Score = 32.3 bits (70), Expect = 0.34
Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR-------LMKLKGHCDNVKALV-VSRDGTQCVSGSS- 208
G L SG V+ +WD R+ + L + + H V+AL T +G
Sbjct: 261 GKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGV 320
Query: 209 -DGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVIS--GGRDRLVIITELRNPENF 379
DG IK W+ C++++ S+ V +L+ + ++S G + + + +
Sbjct: 321 GDGKIKFWNTHTGACLNSVETGSQ-VCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKM 379
Query: 380 MIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL---PPLST 502
+ TS +L + + + + + D ++R W + PP +T
Sbjct: 380 AELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTT 423
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCV 253
G T+ L +W + S++ +L GH V + S +G S + D ++LW+V +
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPK 423
Query: 254 STIRVHSEAVWALIATDTFSHVIS 325
+T + S+ + FSHV S
Sbjct: 424 TTKKAASKKY-----PELFSHVNS 442
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 98 VWDPRN--CSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
+WD + S L+ + V ++ ++DG G + ++LW R V T+R
Sbjct: 150 LWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGG 209
Query: 272 SEAVWALIATDTFSHVI-SGGRDRLVIITELR 364
E+ +A D +H++ +GG D ++ ++R
Sbjct: 210 HESRVGSLAWD--NHILTTGGMDGKIVNNDVR 239
Score = 30.7 bits (66), Expect = 1.0
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR------LMKLKGHCDNVKALVVSRDGTQCVS---GSS 208
G SG + V+ +WD S L + + H V+AL ++ G
Sbjct: 264 GNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVG 323
Query: 209 DGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVIS--GGRDRLVIITELRNPENFM 382
DG IK W+ C++++ S+ V +L+ + + ++S G + + + +
Sbjct: 324 DGKIKFWNTHTGACLNSVETGSQ-VCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMA 382
Query: 383 IVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL---PPLST 502
+ TS +L + + + + + D ++R W + PP +T
Sbjct: 383 ELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTT 425
Score = 27.5 bits (58), Expect = 9.6
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKG-HCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G L G +++WD + ++ L+G H V +L + D +G DG I
Sbjct: 180 GLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL--AWDNHILTTGGMDGKIVNND 237
Query: 233 VS-QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
V + V T H+E V L +++ + SGG D +V I
Sbjct: 238 VRIRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHI 278
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 32 HEATMNPP-GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGS 205
++A NP G V S S + LR+WD R M + H + + ++ D + S
Sbjct: 153 YQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSS 212
Query: 206 SDGTIKLWSVSQQRC-VSTIRVHSEAV 283
D T+K+W V R ++ + H AV
Sbjct: 213 VDKTVKVWDVRSYRVPLAVLNGHGYAV 239
Score = 37.1 bits (82), Expect = 0.012
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 194 VSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVI-SGGRDRLVIITELRNP 370
++ S D T+KLW++ + V T + H+ V+ + V S D + I ++R P
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREP 182
Query: 371 ENFMIVCEETSPILKLCFTADQQGIWVSTS-DSDVRCWKL----PPLSTLTSETY 520
+ MI+ IL + I ++S D V+ W + PL+ L Y
Sbjct: 183 GSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGY 237
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 149 DNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISG 328
++++A+ S G VS D +K+WS RC++T+ I++D SHV
Sbjct: 64 ESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDD-SHVCYA 122
Query: 329 GRDRLVIITEL 361
+ +V + EL
Sbjct: 123 DKFGVVWVIEL 133
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/114 (23%), Positives = 46/114 (40%)
Frame = +2
Query: 140 GHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHV 319
GH D+V L SR +S S D T++LW + Q C+ + +
Sbjct: 517 GHLDDVLDLSWSRSQL-LLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYF 575
Query: 320 ISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCW 481
ISG D + I + N + + + +C+T D Q +V + + R +
Sbjct: 576 ISGSLDAKIRIWNISN-RQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLY 628
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G T+ L +W + ++ +L GH V + S DG S + D T++ W+V
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 34.7 bits (76), Expect = 0.064
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 11/155 (7%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR------LMKLKGHCDNVKALVVSRDGTQCVS---GSS 208
G L SG + V+ +WD S L +L+ H VKAL ++ G
Sbjct: 278 GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGG 337
Query: 209 DGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVIS--GGRDRLVIITELRNPENFM 382
D TIK W+ C++++ S+ V +L+ + ++S G + + + +
Sbjct: 338 DRTIKFWNTHTGACLNSVDTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMA 396
Query: 383 IVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ TS +L + + D + + D +R W +
Sbjct: 397 ELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 32.3 bits (70), Expect = 0.34
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLK-GHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
P G + G +++WD + +L LK GH V +L + + +G DG I
Sbjct: 192 PDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSL--AWNNHILTTGGMDGLIIN 249
Query: 227 WSVS-QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
V + V T R H++ V L + + + SGG D +V I
Sbjct: 250 NDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHI 292
Score = 31.1 bits (67), Expect = 0.78
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+L +G + ++ D R S +++ +GH V L S G Q SG +D + +W S
Sbjct: 237 ILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRS 296
Query: 239 QQRCVST------IRVHSEAVWALIATDTFSHVIS---GGRDRLV 346
ST + H+ AV AL +++++ GG DR +
Sbjct: 297 VASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTI 341
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
G T+ L +W + ++ +L GH V + S DG S + D T++ W+V
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 34.7 bits (76), Expect = 0.064
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 11/155 (7%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSR------LMKLKGHCDNVKALVVSRDGTQCVS---GSS 208
G L SG + V+ +WD S L +L+ H VKAL ++ G
Sbjct: 268 GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGG 327
Query: 209 DGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVIS--GGRDRLVIITELRNPENFM 382
D TIK W+ C++++ S+ V +L+ + ++S G + + + +
Sbjct: 328 DRTIKFWNTHTGACLNSVDTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMA 386
Query: 383 IVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ TS +L + + D + + D +R W +
Sbjct: 387 ELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 32.3 bits (70), Expect = 0.34
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRNCSRLMKLK-GHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
P G + G +++WD + +L LK GH V +L + + +G DG I
Sbjct: 182 PDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSL--AWNNHILTTGGMDGLIIN 239
Query: 227 WSVS-QQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVII 352
V + V T R H++ V L + + + SGG D +V I
Sbjct: 240 NDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHI 282
Score = 31.1 bits (67), Expect = 0.78
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+L +G + ++ D R S +++ +GH V L S G Q SG +D + +W S
Sbjct: 227 ILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRS 286
Query: 239 QQRCVST------IRVHSEAVWALIATDTFSHVIS---GGRDRLV 346
ST + H+ AV AL +++++ GG DR +
Sbjct: 287 VASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTI 331
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNC-SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G + G ++ V+D R + L+GH V + V DG V+ +DG +KLWS
Sbjct: 82 GPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTV-SYVRFLDGGTVVTAGTDGCLKLWS 140
Query: 233 VSQQRCVSTIRVH 271
V R + T H
Sbjct: 141 VEDGRVIRTYEGH 153
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 36.3 bits (80), Expect = 0.021
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVS-RDGTQCVSGSSDGTIKLWS 232
G + + V++V+D + L L+ H + + +D VSG DG +K W
Sbjct: 105 GALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWD 164
Query: 233 VSQQRCVSTIRVHSEAV-WALIATDTFSHVISGGRDRLVIITELR-NPENFMIVCEETSP 406
V+ +S + H + V + S +++G D V + + R + N++ P
Sbjct: 165 VAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLP 224
Query: 407 ILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ + + G+ + + V+ W L
Sbjct: 225 VEDVVY-LPSGGLIATAGGNSVKVWDL 250
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 149 DNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHS-EAVWALIATDTFSHVIS 325
D V ++ DG + G ++++ + ++ + T+R HS A + H++S
Sbjct: 94 DVVSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVS 153
Query: 326 GGRDRLV 346
GG D +V
Sbjct: 154 GGDDGVV 160
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 110 RNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTI 262
R S+ +L+GH V AL + +G+ +SGS D I +W+ S ++ + +I
Sbjct: 38 RRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSI 88
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKL-KGHCDNV--KALVVSRDGTQCVSGSSDGT 217
N G++L+SGS + + +W+ + L + GH N+ V VSG+ D
Sbjct: 59 NSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAE 118
Query: 218 IKLWSVSQ 241
++L++ S+
Sbjct: 119 VRLFNTSR 126
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 38 ATMNPP-GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
A++ P G V+G + +R++D + KGH V + + G SGS DG
Sbjct: 233 ASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDG 292
Query: 215 TIKLW 229
TI++W
Sbjct: 293 TIRIW 297
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/106 (19%), Positives = 46/106 (43%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
+ P G L+S S + + + + +GH V + + + + S S+D + K
Sbjct: 27 ITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAK 86
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
LW + + H V A + ++I+GG ++++ + +L
Sbjct: 87 LWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKILRVFDL 131
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD-GTIKLWSVS 238
L++G EK+LRV+D R + ++ +++ L +S +D G ++LW V
Sbjct: 117 LITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVR 176
Query: 239 QQRCVSTIRVHSEAVWALIATD 304
+ V T+ S A ++ D
Sbjct: 177 SGKIVQTLETKSPVTSAEVSQD 198
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 35.1 bits (77), Expect = 0.048
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNC-SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
G+ + G ++ V+D R L+ L GH V D V+GS+DG++K W
Sbjct: 225 GSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTV-TYARFMDSHTIVTGSTDGSLKQWD 283
Query: 233 VSQ-QRCVSTIRVHSEAVWALIATDTFSH---VISGGRDRLVIITELR 364
+ +R V T R H + + + H V+SG + V + + R
Sbjct: 284 IDNGRRVVRTYRGHVNS-RNFVGLSVWRHGGLVVSGSENNQVFVYDKR 330
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +2
Query: 197 SGSSDGTIKLWSVSQQRCV-STIRVHSEAVWALIATDTF--SHVISGGRDRLVIITELRN 367
SGS DGT+++W + T+R A + D F S + G DR + ++R
Sbjct: 185 SGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRR 244
Query: 368 PENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ +IV + + + D I ++D ++ W +
Sbjct: 245 LVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDI 284
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 35.1 bits (77), Expect = 0.048
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +2
Query: 14 RAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQC 193
R G + NP G+VL +G+ + LRV+ + + L+ +VK L S G
Sbjct: 151 RDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFL 210
Query: 194 VSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWA 289
VS ++W V+ V+++ + ++A
Sbjct: 211 VS-LGGPVCRVWDVNASAAVASLSKEKDEMFA 241
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/110 (20%), Positives = 50/110 (45%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
+ P G L+S S + + + + +GH V + + ++ + S S+D T K
Sbjct: 22 VTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAK 81
Query: 224 LWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPE 373
+W+ + + H V A ++ +++GG ++++ I +L P+
Sbjct: 82 IWNALTGDELHSFE-HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPD 130
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 ATMNPP-GTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDG 214
A++ P G ++G + + +D + + KGH V + + G SGS DG
Sbjct: 228 ASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDG 287
Query: 215 TIKLWSV 235
T+++W V
Sbjct: 288 TVRIWVV 294
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 DPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWD--PRNCSRLMKLKGHCDNVKALVVSRD 181
D +G ++ + G++ ++ S + +R++D C R + V + V ++D
Sbjct: 170 DSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKD 229
Query: 182 GTQCVSGSSDGTIKLWSVSQQRCV 253
+S D T+KLW + R V
Sbjct: 230 QRFVLSSGKDSTVKLWEIGSGRMV 253
Score = 32.3 bits (70), Expect = 0.34
Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 8/160 (5%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWD--PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGS 205
++ +P T+L+S + + ++ +D R K+ NV+++ G ++G+
Sbjct: 88 NDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGT 147
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIA----TDTFSHVISGGRDRLVIITELRNPE 373
L+ V+ +C V I + T S I+ +D + + + + +
Sbjct: 148 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAK 207
Query: 374 NFMIV--CEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ S + FT DQ+ + S DS V+ W++
Sbjct: 208 CVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 247
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 DPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWD--PRNCSRLMKLKGHCDNVKALVVSRD 181
D +G ++ + G++ ++ S + +R++D C R + V + V ++D
Sbjct: 262 DSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKD 321
Query: 182 GTQCVSGSSDGTIKLWSVSQQRCV 253
+S D T+KLW + R V
Sbjct: 322 QRFVLSSGKDSTVKLWEIGSGRMV 345
Score = 32.3 bits (70), Expect = 0.34
Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 8/160 (5%)
Frame = +2
Query: 32 HEATMNPPGTVLVSGSTEKVLRVWD--PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGS 205
++ +P T+L+S + + ++ +D R K+ NV+++ G ++G+
Sbjct: 180 NDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGT 239
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIA----TDTFSHVISGGRDRLVIITELRNPE 373
L+ V+ +C V I + T S I+ +D + + + + +
Sbjct: 240 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAK 299
Query: 374 NFMIV--CEETSPILKLCFTADQQGIWVSTSDSDVRCWKL 487
+ S + FT DQ+ + S DS V+ W++
Sbjct: 300 CVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 339
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
L+S S + +R+W C + + H + V ++ + D +SGS DG +++WS SQ
Sbjct: 370 LLSASVDNSVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Query: 242 QRCV 253
+ V
Sbjct: 429 CQVV 432
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 131 KLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS-VSQQRC 250
+++ H + A+ S DG S DG +++WS V +RC
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERC 286
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
L+S S + +R+W C + + H + V ++ + D +SGS DG +++WS SQ
Sbjct: 370 LLSASVDNSVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Query: 242 QRCV 253
+ V
Sbjct: 429 CQVV 432
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 131 KLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS-VSQQRC 250
+++ H + A+ S DG S DG +++WS V +RC
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERC 286
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
L+S S ++ +R+W C ++ H + V + + D +SGS DG +++W V++
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 242 QRCV 253
R V
Sbjct: 395 CRVV 398
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVSQ 241
L+S S ++ +R+W C ++ H + V + + D +SGS DG +++W V++
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 242 QRCV 253
R V
Sbjct: 395 CRVV 398
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 34.7 bits (76), Expect = 0.064
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Frame = +2
Query: 32 HEATMNPPGTVL-VSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSS 208
+ +++P G +L + G + L V DP L L GH D A DG +G+
Sbjct: 279 NHTSLSPDGKLLTIVGDNPESLLV-DPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 209 DGTIKLWSV-SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
D T ++W + + + V+ +R + A+ ++ T ++ V + ++ N
Sbjct: 338 DKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 397
Query: 386 VCEETSPILKLCFTADQQGIWVSTSD 463
+ I + F+ D + +++ D
Sbjct: 398 EIDFFGEISGISFSPDTEALFIGVWD 423
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 34.3 bits (75), Expect = 0.084
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
+ N GTVL +G+ + LRV++ P + L + K H +VK+L S G VS +
Sbjct: 149 SFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHA-SVKSLTFSESGKFLVSLGAP-L 206
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWA 289
++W V+ ++++ + ++A
Sbjct: 207 CRVWDVNASAAIASLSKEKDEMFA 230
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 34.3 bits (75), Expect = 0.084
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 41 TMNPPGTVLVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGT 217
+ N GTVL +G+ + LRV++ P + L + K H +VK+L S G VS +
Sbjct: 149 SFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHA-SVKSLTFSESGKFLVSLGAP-L 206
Query: 218 IKLWSVSQQRCVSTIRVHSEAVWA 289
++W V+ ++++ + ++A
Sbjct: 207 CRVWDVNASAAIASLSKEKDEMFA 230
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 34.3 bits (75), Expect = 0.084
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +2
Query: 149 DNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ--------RCVSTIRVHSEAVWALIATD 304
+ ++ VS DG V+G+ DG + +W VS+ R ++ H+ V L +
Sbjct: 3275 NQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQ 3334
Query: 305 TFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
+ + S D VII +L + +F+ S + + + D G V+ + S + W
Sbjct: 3335 PYMMIASSSDDCTVIIWDL-SSLSFVRQLPNFSVPVTVVYINDLTGEIVTAAGSVLAVWS 3393
Query: 485 L 487
+
Sbjct: 3394 I 3394
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 34.3 bits (75), Expect = 0.084
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Frame = +2
Query: 158 KALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRD 337
K L + + V G DGT +++ + + C IR + L +D +
Sbjct: 222 KGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQIIRTQGGPITCLSLSDNQLFLSGSSLG 281
Query: 338 RLVIITELRNPENFMIVCEETSP-ILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSE 514
R+ + L + + T+ I +CF ++ T+ V CW L + L +
Sbjct: 282 RVTVSDPLMDQPVATLKSTITAGGIQTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEK 341
Query: 515 TYDQN 529
N
Sbjct: 342 RVSPN 346
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 34.3 bits (75), Expect = 0.084
Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Frame = +2
Query: 32 HEATMNPPGTVL-VSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSS 208
+ A+++P G +L + G + L V DP L L GH D A DG +G+
Sbjct: 281 NHASLSPDGKLLAIVGDNPEGLIV-DPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 209 DGTIKLWSV-SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
D T ++W + + + V+ ++ + A+ ++ T ++ V + ++ N
Sbjct: 340 DKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 399
Query: 386 VCEETSPILKLCFTADQQGIWVSTSD 463
+ I + F+ D + +++ D
Sbjct: 400 EIDFFGEISGISFSPDTEALFIGVWD 425
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 34.3 bits (75), Expect = 0.084
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKLWSVS 238
+L+S S +K +R+W C + + + H + V + + + SGS DG ++W +S
Sbjct: 285 LLLSASKDKTVRLWRT-GCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
Query: 239 QQRCVS 256
++R V+
Sbjct: 344 EERVVA 349
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 125 LMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
+ K+ GH + L S DG +G DG +K+W ++
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRIT 228
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 34.3 bits (75), Expect = 0.084
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Frame = +2
Query: 14 RAAGIRHEATMNPPGTVLVSGSTEKVLRVW-----DPRNCSRLMKLKGHCDN---VKALV 169
+ AG+ H+ G ++V+G+ + ++ VW PR RL K C + V L
Sbjct: 3334 QCAGVSHD------GRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLR 3387
Query: 170 VSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVI 349
VS+ SGS D T+ +W +S V + + A+ D +++ L +
Sbjct: 3388 VSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAAGTVLAV 3447
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +2
Query: 149 DNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ--------RCVSTIRVHSEAVWALIATD 304
+ ++ VS DG V+G+ DG + +W VS+ R + H+ V L +
Sbjct: 3331 NQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQ 3390
Query: 305 TFSHVISGGRDRLVIITEL 361
+ + SG D VII +L
Sbjct: 3391 PYMMIASGSDDCTVIIWDL 3409
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPR---NCSRLMKLKGHCDNVKALVVSRDG-TQCVSGSSDGTIKLW 229
++ +G ++ +LRVWDPR + + + H + A + +S S DG I LW
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLW 386
Query: 230 SVSQQRCVSTIRVHS 274
+ + V T HS
Sbjct: 387 DL--RTAVMTKHTHS 399
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ 241
L+GH +V+++ + G S S D TI LW+ ++
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNE 236
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 33.9 bits (74), Expect = 0.11
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVS---TIRVHSEAVWALIATD 304
L+ H D V L S +G S S D T +W +S +S T+ H + V A++ +
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 305 TFSHVISGGRDRLVIITELRNPENFMIVCEETSPILKLCFTADQQGIWVSTSDSDVRCWK 484
V++ G + ++ ++ + + + + + + D QGI +D + W
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Query: 485 L 487
L
Sbjct: 390 L 390
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCV-SGSSDGTIKLWSVSQ 241
+ SGS + + +W +++L GH V + S + S S DGTI++W + +
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 33.9 bits (74), Expect = 0.11
Identities = 27/134 (20%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+ SG T +++++WD + + KLKGH + ++ + S S G + + +++
Sbjct: 108 ICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASG 167
Query: 245 RCVSTIRVHSEAVWALIATDTFSH--VISGGRDRLVII--TELRNPENFMIVCEETSPIL 412
+ ++ + V L+ S +++ G D V + T R+P+ + + ++P
Sbjct: 168 ARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLK-QHSAPTA 226
Query: 413 KLCFTADQQGIWVS 454
+CF+ + I S
Sbjct: 227 GVCFSPSNEKIIAS 240
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 137 KGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQR 247
K H D++ ++ S DG +S S DG++K+W + Q +
Sbjct: 370 KAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMK 406
Score = 33.5 bits (73), Expect = 0.15
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRN-CSRLMKLKGHCDNVKALVVS-----RDGTQCVSGSSDGTI 220
TVL S S + LR+WD N S+ +K + V+ RDG + G DG+I
Sbjct: 293 TVLTS-SEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSI 351
Query: 221 KLWSV----SQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMIV 388
++WS+ + + + H++ + ++ + ++S D + + +LR + + V
Sbjct: 352 QIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKV 411
Query: 389 CE---ETSPILKLCFTADQQGIWVSTS 460
E P + F+ D+Q I TS
Sbjct: 412 FEGLPNYYPQTNVAFSPDEQIILTGTS 438
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 119 SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
S ++LKGH V +L V G + +SGS D T++++
Sbjct: 168 SNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMY 204
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/75 (22%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLK---GHCDNVKALVVSRDGTQCVSGSSDGT 217
+P GT ++ S++K ++D + ++ +L GH ++ A+ S D + ++ S+D +
Sbjct: 60 SPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKS 119
Query: 218 IKLWSVSQQRCVSTI 262
K+W V++ + ++
Sbjct: 120 AKVWEVAEDGTIGSV 134
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 155 VKALVVSRDGTQCVSGSSDGTIKLWSVS 238
V A V+S DG + + G DG + ++SVS
Sbjct: 314 VAASVISPDGKEAIVGGQDGKLHIYSVS 341
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFS 313
L GH D + L VS D +SGS DGT ++ + R + +++ S + + +A
Sbjct: 1107 LCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAASHHG 1166
Query: 314 HVISGGRDRL 343
++ G D L
Sbjct: 1167 RIVLYGDDDL 1176
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 33.9 bits (74), Expect = 0.11
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Frame = +2
Query: 107 PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVW 286
P S L + H V L + DG +S SD I+LW + R +T+ V+ E
Sbjct: 299 PGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR--NTL-VNFET-- 353
Query: 287 ALIATDTFSHVISGGRDRLVIITELRNPENFMIVCEETSPILK--------LCFTADQQG 442
I T+ + + LV + ++ + F + T+ +L+ CF ++ Q
Sbjct: 354 GRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQE 413
Query: 443 IWVSTSDSDVRCW 481
++ S SD + W
Sbjct: 414 LYTSGSDRQILVW 426
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCV-SGSSDGTIKLWSV 235
T++ +G+ + +R+ D + + L GH D V ++ S + +G DG I+ W +
Sbjct: 161 TLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 236 SQQRC 250
+ C
Sbjct: 221 RRAGC 225
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 140 GHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQR----CVSTI---RVHSEAVWALIA 298
G + +K L + G+Q V GSS + Q+R +ST+ H AV L A
Sbjct: 261 GGQNRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKA 320
Query: 299 TDTFSHVISGGRDRLVIITELRNPENFMI 385
T+ +++S G D + + ++ + N ++
Sbjct: 321 TNDGMYLLSAGSDSRIRLWDIESGRNTLV 349
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/70 (22%), Positives = 31/70 (44%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSG 202
GI+ + + +P + T K +W R + L+GH ++V + + + +
Sbjct: 361 GIQLDTSDDPALVFVPCMKTVKAFGMWSGRTT---LMLRGHYESVNTCCFNSNDQELYTS 417
Query: 203 SSDGTIKLWS 232
SD I +WS
Sbjct: 418 GSDRQILVWS 427
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.5 bits (73), Expect = 0.15
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWD-PRNCSRLMKLKGHCDNV---KALVVSRDGTQ 190
G + + N G VL+SGS ++ + +WD +L GH +NV K + S D T
Sbjct: 60 GCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRT- 118
Query: 191 CVSGSSDGTIKLWSVSQQRCVST--IRVHSEAVWALIATDTFSHVI-SGGRDRLVIITEL 361
V+ ++DG ++ S+ + V T + +H L H+ + G D LV +L
Sbjct: 119 IVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGEDGLVQRFDL 178
Query: 362 R-NPENFMIVCEETSP 406
R + C P
Sbjct: 179 RTEAPTELFTCRSVDP 194
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVS-RDGTQCVSGSSDGTIKLW 229
+ SGS + + +W+ +N L L GH V + + ++ S S D TI++W
Sbjct: 458 IASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +2
Query: 101 WDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD----GTIKLWSVSQQRCVSTIRV 268
W R S L + H +++LVVS D + D G+++ W ++ CVS+
Sbjct: 219 WKIR-ASVLSSARAHHGALRSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSYHA 277
Query: 269 HSEAV 283
H E V
Sbjct: 278 HEEVV 282
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 50 PPGTVLVSGSTEKVLRVWDPRN--CSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
P +LVS S +K LR+WD R + +KGH D V + +S ++ G
Sbjct: 463 PESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIWGKDVISISRNNIGIFS 522
Query: 224 L 226
L
Sbjct: 523 L 523
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPR-----NCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSD 211
N G++L + +K + +W+ + + L GH ++VK ++ S S D
Sbjct: 101 NASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYD 160
Query: 212 GTIKLWSVSQQ----RCVSTI----RVHSEAVWAL 292
TIK+W + CV T+ HS VW++
Sbjct: 161 NTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSI 195
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 65 LVSGSTEKV-LRVWDPRNCSRLMKLKGHCDN--VKALVVSRDGTQCVSGSSDGTIKLWSV 235
+V ST+ + +WD R+ LK + + V +LV S G VSGSS G + LW +
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLWDL 1262
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 101 WDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLW 229
W PR + L+ H V + S D + VS S D T+K+W
Sbjct: 1067 WKPRGVL-VAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVW 1108
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIK 223
+NP +V+ G + + +W P + + L++++ H V ++ +G + + IK
Sbjct: 247 VNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIK 306
Query: 224 LWSVSQQRCVSTI 262
+W + + V TI
Sbjct: 307 IWDLRKFEEVQTI 319
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.9 bits (69), Expect = 0.45
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 9/160 (5%)
Frame = +2
Query: 29 RHEATMNPPGTVLVSGSTEKVLRVW-DPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGS 205
+H + + G+ S EK + P S L + H V L + DG +S
Sbjct: 272 KHTGSQSVKGSSSEKPSVEKSRQKRIHPGMLSTLDRATAHYGVVTGLKATNDGMYLLSAG 331
Query: 206 SDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
S I+LW + R +T+ V+ E I TD + + LV + ++ + F +
Sbjct: 332 SYSRIRLWDIESGR--NTL-VNFET--GRIQTDRAIQLDTSDDPALVFVPCMKTVKGFGM 386
Query: 386 VCEETSPILK--------LCFTADQQGIWVSTSDSDVRCW 481
T+ +L+ CF ++ Q ++ S +D + W
Sbjct: 387 WSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 TVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCV-SGSSDGTIKLWSV 235
T++ +G+ + +R+ D + + L GH D V ++ S + +G DG I+ W +
Sbjct: 161 TLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 236 SQQRC 250
+ C
Sbjct: 221 RRAGC 225
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 119 SRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTI 262
S L +L GH +V S + S S D TI++W +S+ C+ I
Sbjct: 207 SVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVI 254
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P L+SGS + +WD S L HC V+ + S SSD T ++
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 121
Query: 227 WSVSQQ 244
++ Q
Sbjct: 122 YANKPQ 127
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 31.1 bits (67), Expect = 0.78
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWD--PRNCSRLMK----LKGHCDNVKALVVSRDGTQCVSGSS 208
+P G +L SG+ L +W P ++ K L H +V L S D +SGS
Sbjct: 73 SPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSV 132
Query: 209 DGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDR 340
D + +W V++ + H V + +V S DR
Sbjct: 133 DNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDR 176
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P L+SGS + +WD S L HC V+ + S SSD T ++
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Query: 227 WSVSQQ 244
++ Q
Sbjct: 181 YANKPQ 186
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 31.1 bits (67), Expect = 0.78
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWD--PRNCSRLMK----LKGHCDNVKALVVSRDGTQCVSGSS 208
+P G +L SG+ L +W P ++ K L H +V L S D +SGS
Sbjct: 73 SPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSV 132
Query: 209 DGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDR 340
D + +W V++ + H V + +V S DR
Sbjct: 133 DNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDR 176
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 47 NPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKL 226
+P L+SGS + +WD S L HC V+ + S SSD T ++
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Query: 227 WSVSQQ 244
++ Q
Sbjct: 181 YANKPQ 186
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 131 KLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
KL+GH + L SR VS SDG + LWS
Sbjct: 506 KLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWS 539
>At5g45560.1 68418.m05595 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
weak similarity to SP|P79245 Steroidogenic acute
regulatory protein, mitochondrial precursor (StAR) {Ovis
aries}; contains Pfam profiles PF01852: START domain,
PF00169: PH domain
Length = 719
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +2
Query: 83 EKVLRV-WDPRNCSRLMKLKG----HCDNVKALVVSRDGTQ 190
E++L V + PR+CSR MK G C+ + LV+S DGT+
Sbjct: 213 EELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTR 253
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 44 MNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGS-SDGTI 220
++P G +LV+ ST+ L+ ++ + ++ K GH V+ + + DG +S + + I
Sbjct: 166 VSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYI 223
Query: 221 KLW 229
+W
Sbjct: 224 AVW 226
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 140 GHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQ---QRCVSTIRVHSEAVW 286
GH D + +V+ G + + SSD TIK+ VS + ++T+ H VW
Sbjct: 9 GHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 152 NVKALVVSRDGTQCVSGSSDGTIKLWSVSQQRCV 253
+V++L S DG +S DG + +W + +C+
Sbjct: 376 SVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCL 409
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCS-RLMKLKGHCDNV---KALVVSRDGTQ 190
G + + N G +L+SGS ++ + +WD + S +L GH +N+ K + S D T
Sbjct: 56 GCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRT- 114
Query: 191 CVSGSSDGTIKLWSVSQQRCVST 259
V+ ++D ++ + + V T
Sbjct: 115 IVTSAADKQVRYSKILESGQVET 137
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 71 SGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQ 244
+G + + +WD N RL + + ++ AL SRDG Q ++ +S T + SQ+
Sbjct: 258 TGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDG-QLLAVASSYTFEEGEKSQE 314
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 65 LVSGSTEKVLRVWD--PRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVS 238
L+S S +K +R+W +C + + +V+ V+ + +SGS DG +++W++S
Sbjct: 342 LLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNEN--YFMSGSIDGKVRIWNIS 399
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 134 LKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQR 247
+K H + A+ S DG S DG +++W V + +
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +2
Query: 68 VSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSVSQQR 247
+SGS + +R+W+ CS ++ D + A+ DG + GS +G+ + +++S +
Sbjct: 385 MSGSIDGKVRIWNISGCS-VVDWADLKDIISAVCYRPDGQGGIIGSLNGSCRFFNMSGEF 443
Query: 248 CVSTIRVH 271
++H
Sbjct: 444 LELDSQIH 451
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
V+ G + + +++ R KLKGH + L S VS +D I WS+
Sbjct: 876 VIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSI 933
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVS 175
VL+SGS + +R+WD + + +M + H V+ +++S
Sbjct: 551 VLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 5/117 (4%)
Frame = +2
Query: 5 VDPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWD-PRNCSRLMKLK----GHCDNVKALV 169
V P A + +P +LV+ S + +R W+ R+ + L H V
Sbjct: 20 VTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSA 79
Query: 170 VSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDR 340
DGT SG D K+W + T+ +H + A+ + + +G D+
Sbjct: 80 WKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDK 136
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 71 SGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSS 208
SG + + +WD N RL + + ++ AL SRDG SS
Sbjct: 257 SGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVASS 302
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.5 bits (63), Expect = 2.4
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 2/146 (1%)
Frame = +2
Query: 32 HEATMNPPGT-VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSS 208
+ ++++P G V V G L V D N + LKGH D A +G +G+
Sbjct: 281 NHSSLSPDGKLVAVVGDDPDGLLV-DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 339
Query: 209 DGTIKLWSVSQ-QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
D T ++W + V+ ++ + AV ++ T +V V I + ++
Sbjct: 340 DKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQ 399
Query: 386 VCEETSPILKLCFTADQQGIWVSTSD 463
+ I + F+ D + +++ D
Sbjct: 400 EIDFFGEISGISFSPDTESLFIGVWD 425
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.5 bits (63), Expect = 2.4
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 2/146 (1%)
Frame = +2
Query: 32 HEATMNPPGT-VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSS 208
+ ++++P G V V G L V D N + LKGH D A +G +G+
Sbjct: 275 NHSSLSPDGKLVAVVGDDPDGLLV-DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 333
Query: 209 DGTIKLWSVSQ-QRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITELRNPENFMI 385
D T ++W + V+ ++ + AV ++ T +V V I + ++
Sbjct: 334 DKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQ 393
Query: 386 VCEETSPILKLCFTADQQGIWVSTSD 463
+ I + F+ D + +++ D
Sbjct: 394 EIDFFGEISGISFSPDTESLFIGVWD 419
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWD--PRNCSRLMKLKGHCDNVKALVVSR-DGTQCVSGSSDGTIKL 226
G + VSG + ++ VWD + M + C +V AL S+ G+Q +G +DG+++L
Sbjct: 1140 GYLYVSGESLSIM-VWDLDKEQLVKSMPFESGC-SVTALSASQVHGSQLAAGFADGSVRL 1197
Query: 227 WSV 235
+ V
Sbjct: 1198 YDV 1200
>At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF01852: START domain, PF00169:
PH domain
Length = 718
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +2
Query: 83 EKVLRV-WDPRNCSRLMKLKG----HCDNVKALVVSRDGTQ 190
E++L V + PR+CSR MK G C+ + L++S DGT+
Sbjct: 213 EELLEVDYLPRSCSRAMKAVGVVEATCEEIFELLMSMDGTR 253
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 74 GSTEKVLRVWDPRNCSRLMKLKGHCDNVKALV----VSRDGTQCVSGSSDGTIKLWSV 235
G+ E + VWD ++C ++ K + K+++ +S DG+ ++ DGTI W V
Sbjct: 309 GNQEGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGTIWRWDV 366
>At2g19870.1 68415.m02323 tRNA/rRNA methyltransferase (SpoU) family
protein similar to SP|P25270 Ribose methyltransferase
PET56 (EC 2.1.1.-) {Saccharomyces cerevisiae}; contains
Pfam profile PF00588: SpoU rRNA Methylase (RNA
methyltransferase, TrmH) family
Length = 589
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 5 VDPRAAGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRD 181
V P+A + +P T+LV G+ LR R+C+ L+++ G+ N A+ S D
Sbjct: 498 VSPKAVALNEVLPGSP--TILVLGNEGTGLRPLVERSCTDLVRISGNMPNEVAVTESDD 554
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 98 VWDPRNCSRLMKLKGHCDNVKALVVSR---DGTQCVSGSSDGTIKLWSVSQQRCVSTIRV 268
+WD +N S G+ + A V+R +G + S DGTI+LW ++ Q V+ +
Sbjct: 299 IWDIKNLSC-----GNMHSPTAACVARGCSEGVSFTTCSEDGTIRLWDLAFQ--VNPLEA 351
Query: 269 HSEAVWALIATDTFSHVISGG 331
++ + + +T H+ S G
Sbjct: 352 NASSNPSESSTQGIMHLASAG 372
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = +2
Query: 23 GIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLK---GHCDNVKALVVSRDGTQC 193
G ++ ++P ++V+ +K + ++D + + K H D VK +++
Sbjct: 527 GTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVK-VILDPSCNYL 585
Query: 194 VSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGGRDRLVIITEL 361
V S+ TI V+ H EAV +I H+IS D + + +L
Sbjct: 586 VCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKL 641
>At1g60350.1 68414.m06795 no apical meristem (NAM) protein-related
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to CUP-SHAPED COTYLEDON1 (CUC1)
(GI:12060422) [Arabidopsis thaliana]
Length = 320
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 491 PLSTLTSETYDQNSYNTNNVYQRMPL 568
P++ +TSE D SY TNNVY PL
Sbjct: 192 PVTIMTSEGNDWPSYVTNNVYCLHPL 217
>At5g13150.1 68418.m01506 exocyst subunit EXO70 family protein
leucine zipper-containing protein - Lycopersicon
esculentum, EMBL:Z12127 contains Pfam domain PF03081:
Exo70 exocyst complex subunit;
Length = 653
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -1
Query: 432 SAVKHNLRMGLVSSQTIIKFSGFRNSVIMTRRS 334
S+V+ L GLVS+ TI +F F +V++T+RS
Sbjct: 304 SSVRKRLFTGLVSAVTI-RFLDFSGAVVLTKRS 335
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 5 VDPRAAGIRHEATMNPPGTV-LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVV-SR 178
+D A + A P + +V+ +K ++VWD ++L +GH V ++ +
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQK 519
Query: 179 DGTQCV-SGSSDGTIKLW 229
+ Q + S + DG IK W
Sbjct: 520 ENIQFIFSTAVDGKIKAW 537
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
++ G + +++++ R KLKGH V L S VS +D + +WS+
Sbjct: 901 IIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 5 VDPRAAGIRHEATMNPPGTV-LVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVV-SR 178
+D A + A P + +V+ +K ++VWD ++L +GH V ++ +
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQK 519
Query: 179 DGTQCV-SGSSDGTIKLW 229
+ Q + S + DG IK W
Sbjct: 520 ENIQFIFSTAVDGKIKAW 537
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWSV 235
++ G + +++++ R KLKGH V L S VS +D + +WS+
Sbjct: 901 IIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
>At3g09300.1 68416.m01104 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profile PF01237: Oxysterol-binding protein
Length = 458
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = +2
Query: 350 ITELRNPENFMIVCEETS-PILKLCFTADQQGIW-VSTSDSDVRCWKLPPLSTLTSETYD 523
+ EL + + + ++T P L++ + + W +S + R WK P + + ETY+
Sbjct: 106 MAELMEYSHLLDMADKTEDPYLRMVYASS----WAISVYYAFQRTWK--PFNPILGETYE 159
Query: 524 QNSYNTNNVYQRMPLHNIP---GGPAIRHFTVLNDKRHVITKDSANNIALFDV 673
+YN N H+ P G HFT + + TK N+I ++ V
Sbjct: 160 MANYNGVNFISEQVSHHPPMSAGHAENEHFT-YDCTSKLKTKFLGNSIDVYPV 211
>At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 4
WD-40 repeats (PF00400);similar to SP:Q01968 Inositol
polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.-)(Lowe's
oculocerebrorenal syndrome protein) (SP:Q01968) [Homo
sapiens]
Length = 1144
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 398 TSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSE 514
TSP L L + +W D +R WK+ +T T++
Sbjct: 218 TSPALCLLVDHGNRLVWTGHKDGKIRAWKMNQPNTTTAD 256
>At1g33530.1 68414.m04149 F-box family protein contains F-box domain
Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein
interaction domain
Length = 441
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 206 SDGTIKLWSVSQQRCVSTIR--VHSEAVWALI 295
S G I +WS+ + CVS +R +HS VW L+
Sbjct: 326 SSGYIYMWSLEDRLCVSNVRQGLHS-YVWVLV 356
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +2
Query: 197 SGSSDGTIKLWSVS--QQRCVSTIRVHSEAVWAL-IATDT-FSHVISGGRDRL 343
+GS D ++KLW +S + C++T + ++ AV+++ A D F I G + L
Sbjct: 422 TGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLM-KLKGHCDNVKALVVSRDGTQCV 196
AG++ + G+ L G + LR+ + N S ++ + K H +++ + S D
Sbjct: 122 AGLQKCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAH-KSIRDMDFSLDSEFLA 180
Query: 197 SGSSDGTIKLWSVSQQRCVSTI 262
+ S+DG+ ++W +ST+
Sbjct: 181 TTSTDGSARIWKAEDGFPLSTL 202
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
T+ VS S DGTIK+W + + + +R H
Sbjct: 335 TRLVSSSVDGTIKIWQDRKAQPLVVLRPH 363
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
T+ VS S DGTIK+W + + + +R H
Sbjct: 370 TRLVSSSVDGTIKIWQDRKAQPLVVLRPH 398
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
++ G + +++++ R KLKGH + L S VS +D + +W+
Sbjct: 880 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
++ G + +++++ R KLKGH + L S VS +D + +W+
Sbjct: 880 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 28.3 bits (60), Expect = 5.5
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 12/179 (6%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMK-LKGHCDNVKALVVS---RDGTQCV--SGSSDGTIKL 226
L SG+ + + +WD N S+ LKG +++ + S G Q V S S +GT +
Sbjct: 131 LASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVI 190
Query: 227 WSVSQQRCVSTIRVHSEAVWALIATDTFSHVI------SGGRDRLVIITELRNPENFMIV 388
W V+ ++ ++ ++ D F+ ++ S +L+ I L++P +
Sbjct: 191 WDVNNEKIITDLKTTVRCSVLQWDPDHFNQILVASDEDSSPNVKLLDIRYLQSPVRTFVG 250
Query: 389 CEETSPILKLCFTADQQGIWVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQRMP 565
+ ++ C +D + D+ CW + QN + Y +MP
Sbjct: 251 HQRGVIAMEWC-PSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYPKMP 308
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
++ G + +++++ R KLKGH + L S VS +D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +2
Query: 62 VLVSGSTEKVLRVWDPRNCSRLMKLKGHCDNVKALVVSRDGTQCVSGSSDGTIKLWS 232
++ G + +++++ R KLKGH + L S VS +D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/57 (22%), Positives = 22/57 (38%)
Frame = +2
Query: 161 ALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGG 331
A S DG S D T+K+ +C+ + H W + S +++ G
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASG 164
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/57 (22%), Positives = 22/57 (38%)
Frame = +2
Query: 161 ALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGG 331
A S DG S D T+K+ +C+ + H W + S +++ G
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASG 164
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 20 AGIRHEATMNPPGTVLVSGSTEKVLRVWDPRNCSRLMKLKGH---CDNV 157
AG + +P G L SGS++ + ++D ++ + + KLK + C NV
Sbjct: 386 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNV 434
>At5g26290.1 68418.m03143 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein low similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 333
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 446 WVSTSDSDVRCWKLPPLSTLTSETYDQNSYNTNNVYQRMPLHNIPGG--PAIRHFTVLND 619
++S +V WK+ STL + Y N + + Y ++ L N GG P +
Sbjct: 195 FISNPPDNVFTWKILHFSTLEDKVYQSNEFLVGDRYWKLGL-NPKGGLVPIFLYAQGFKA 253
Query: 620 KRHVITKDSANNIAL 664
V T +A N+ L
Sbjct: 254 NAVVTTTYAATNLRL 268
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +2
Query: 194 VSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWAL 292
V+GS DG++K+W +++ +++ V+ + + L
Sbjct: 346 VTGSCDGSVKIWMSNKEDLQNSVEVYKSSFFLL 378
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 185 TQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
T+ VS S DGT+K+W + + + +R H
Sbjct: 354 TRLVSSSVDGTVKIWQDRKTQPLVVLRPH 382
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Frame = +2
Query: 5 VDPRAAGIRHEATMNPPGTVLVSGSTEKVLRVW-----DPRNCSRLMKLKGHCDNVKALV 169
+ P A + +P +LV+ S + +R W D S H V
Sbjct: 21 ITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSA 80
Query: 170 VSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVH 271
DGT +G D K+W + ST+ +H
Sbjct: 81 WKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMH 114
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/57 (22%), Positives = 21/57 (36%)
Frame = +2
Query: 161 ALVVSRDGTQCVSGSSDGTIKLWSVSQQRCVSTIRVHSEAVWALIATDTFSHVISGG 331
A S DG S D T+K+ C+ + H W + S +++ G
Sbjct: 111 AAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASG 167
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 56 GTVLVSGSTEKVLRVWDPRNCSRLMKLKG-HCDNVKALV---VSRDGTQCVSGSSDGTIK 223
G ++ GST+ V+RV + G H ++ L+ S VSG SDG +
Sbjct: 101 GPLVAFGSTDGVIRVLSMITWKLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLLV 160
Query: 224 LWS 232
LWS
Sbjct: 161 LWS 163
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = +2
Query: 65 LVSGSTEKVLRVWDPRNCSRLMK----LKGHCDNVKALV----VSRDGTQCVSGSSDGTI 220
L SG + ++VW N S M L+ H D V+ + + + SGS DG +
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
Query: 221 KLWSVSQQ 244
+W+V ++
Sbjct: 239 IIWTVGKE 246
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,390,223
Number of Sequences: 28952
Number of extensions: 353446
Number of successful extensions: 1849
Number of sequences better than 10.0: 217
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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