Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0013
         (472 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-P...    50   1e-06
AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-P...    46   3e-05
BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p pro...    29   3.2  
AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA ...    29   3.2  
AY147847-1|AAN64333.1| 1282|Drosophila melanogaster cytokine rec...    28   7.3  
AY075427-1|AAL68243.1| 1282|Drosophila melanogaster LD46805p pro...    28   7.3  
AJ420377-1|CAD12503.1| 1282|Drosophila melanogaster interleukine...    28   7.3  
AE014298-2912|AAF49002.1| 1282|Drosophila melanogaster CG14226-P...    28   7.3  
AY121624-1|AAM51951.1|  151|Drosophila melanogaster GH18009p pro...    27   9.7  

>AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-PA,
           isoform A protein.
          Length = 60

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +1

Query: 169 MTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDA 297
           MTRGNQRDLAR KNQKKQ ++ K K       L++++RK RDA
Sbjct: 1   MTRGNQRDLARQKNQKKQADLTKGKRTD---NLTVEQRKARDA 40


>AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-PB,
           isoform B protein.
          Length = 118

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = +1

Query: 169 MTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDA 297
           M  GNQRDLAR KNQKKQ ++ K K       L++++RK RDA
Sbjct: 59  MVSGNQRDLARQKNQKKQADLTKGKRTD---NLTVEQRKARDA 98


>BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p
           protein.
          Length = 391

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 181 NQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHR 291
           N+R   + KN+K Q + QK+KN +++     Q++K R
Sbjct: 319 NKRPNQKNKNKKNQKQKQKQKNKNQQQKNKRQQQKKR 355


>AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 181 NQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHR 291
           N+R   + KN+K Q + QK+KN +++     Q++K R
Sbjct: 307 NKRPNQKNKNKKNQKQKQKQKNKNQQQKNKRQQQKKR 343


>AY147847-1|AAN64333.1| 1282|Drosophila melanogaster cytokine
           receptor domeless protein.
          Length = 1282

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 184 DYHESF*LDNFTKEKFTFVATYNYFKNTVKAGRYASPVE-T*DNAP 50
           DY   F + NFT+   T +  YN   NT    RY++ ++   D+AP
Sbjct: 134 DYDFQFMVCNFTQPPNTVITKYNISYNTNNDWRYSNTLDCNFDSAP 179


>AY075427-1|AAL68243.1| 1282|Drosophila melanogaster LD46805p
           protein.
          Length = 1282

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 184 DYHESF*LDNFTKEKFTFVATYNYFKNTVKAGRYASPVE-T*DNAP 50
           DY   F + NFT+   T +  YN   NT    RY++ ++   D+AP
Sbjct: 134 DYDFQFMVCNFTQPPNTVITKYNISYNTNNDWRYSNTLDCNFDSAP 179


>AJ420377-1|CAD12503.1| 1282|Drosophila melanogaster interleukine
           JAK/STAT receptor protein.
          Length = 1282

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 184 DYHESF*LDNFTKEKFTFVATYNYFKNTVKAGRYASPVE-T*DNAP 50
           DY   F + NFT+   T +  YN   NT    RY++ ++   D+AP
Sbjct: 134 DYDFQFMVCNFTQPPNTVITKYNISYNTNNDWRYSNTLDCNFDSAP 179


>AE014298-2912|AAF49002.1| 1282|Drosophila melanogaster CG14226-PA
           protein.
          Length = 1282

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 184 DYHESF*LDNFTKEKFTFVATYNYFKNTVKAGRYASPVE-T*DNAP 50
           DY   F + NFT+   T +  YN   NT    RY++ ++   D+AP
Sbjct: 134 DYDFQFMVCNFTQPPNTVITKYNISYNTNNDWRYSNTLDCNFDSAP 179


>AY121624-1|AAM51951.1|  151|Drosophila melanogaster GH18009p
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 143 FFCEII*SE*LVVIRGTWP 199
           FFC +     LVVIRG+WP
Sbjct: 52  FFCFVCLQSHLVVIRGSWP 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,959,323
Number of Sequences: 53049
Number of extensions: 253325
Number of successful extensions: 702
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)