Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0011
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    35   0.002
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   3.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   3.9  

>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 140 PRWKLFKKIEKVGRNVRDGLIKAGPAIA 223
           PRWK  K++EK+GRNV     KA P IA
Sbjct: 27  PRWKFGKRLEKLGRNVFRAAKKALPVIA 54


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 379 DYIMQFLDYISNYYKN 426
           D+  + +DYISNY +N
Sbjct: 18  DFAKEMVDYISNYLEN 33


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 379 DYIMQFLDYISNYYKN 426
           D+  + +DYISNY +N
Sbjct: 49  DFAKEMVDYISNYLEN 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,283
Number of Sequences: 2352
Number of extensions: 10909
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)