BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0010
(744 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 25 2.5
AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside ... 25 3.3
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 24 4.3
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 10.0
AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450 pr... 23 10.0
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 10.0
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 25.0 bits (52), Expect = 2.5
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 220 PLSQHL*SL---AWEILYQKLHKDFHGGCYFQNLACLLPSYELLHQ 348
PLS L +L AW+IL QKL F G Q A +L E L Q
Sbjct: 117 PLSGTLFALQGKAWKILRQKLTPTFTSGKMKQMFATVLEVAERLGQ 162
>AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside
phosphorylase protein.
Length = 353
Score = 24.6 bits (51), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 317 AFSLLTNSCTSPCYLVSRH*HFMTI*MFKFKSKT 418
AFSL+TN CT H H + + K + KT
Sbjct: 302 AFSLITNMCTMSYEEEEEHCHDSIVGVGKNREKT 335
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 247 AWEILYQKLHKDFHGGCYFQNLACLLPSYELLHQPMLPCL*TLTLY 384
A E+ Y K H D + Q L+ ++ +P+LP L T+ Y
Sbjct: 486 AAELRYAKEHADKENRHFLQYAQDLISDAKVKGRPILPLLKTVQSY 531
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.0 bits (47), Expect = 10.0
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -3
Query: 628 VNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADDLYTN 449
+ +R LE+ EV P G RLR + V PGD+ ++ R + DD
Sbjct: 860 LKRQRSLEVFQEVFGPKGSIERLRNPSQ-RVK-TPGDVPPSVRKVRASKTLSLYDDRMMT 917
Query: 448 VTIS 437
T++
Sbjct: 918 ATVA 921
>AY028785-1|AAK32959.1| 509|Anopheles gambiae cytochrome P450
protein.
Length = 509
Score = 23.0 bits (47), Expect = 10.0
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +1
Query: 214 AKPLSQHL*SLA---WEILYQKLHKDFHGGCYFQNLACLLPSYELLHQPML 357
A PLS +L +L W L QKL F G Q +L LH+ +L
Sbjct: 115 ADPLSGNLFALEGHEWRALRQKLTPTFTSGRMKQMFGTMLQVATELHRHLL 165
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.0 bits (47), Expect = 10.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 198 WFSIFRKASFSASVKSCLGNSI 263
W+S R FS S LGN I
Sbjct: 194 WYSDHRYVRFSVDSSSVLGNGI 215
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,410
Number of Sequences: 2352
Number of extensions: 14850
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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