Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0010
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 122 3e-28
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 111 7e-25
Z47356-1|CAA87414.2| 82|Caenorhabditis elegans Hypothetical pr... 101 5e-22
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 84 9e-17
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 35 0.070
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 35 0.070
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.1
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 122 bits (294), Expect = 3e-28
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -3
Query: 742 SRTRKCNCRQEMVTRNLGPGRFQMMQQTVCDECPNVKFVNEERLLEIKVEVGAPDGHKSR 563
S TR+CNCR EM T +G GRFQM Q VCDECPNVK V E ++LE++VEVGA +GH+
Sbjct: 163 SGTRQCNCRHEMRTEQMGQGRFQMFQVKVCDECPNVKLVQENKVLEVEVEVGADNGHQQI 222
Query: 562 LRGEGEPHVDGEPGDLIVILKTERHPQ 482
GEGEPH++G+PGDL ++ ++HP+
Sbjct: 223 FHGEGEPHIEGDPGDLKFKIRIQKHPR 249
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 111 bits (266), Expect = 7e-25
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Frame = -3
Query: 655 CDECPNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPH-VDGEPGDLIVILKTERHPQF 479
C C K+ N ++LE+ V G K +G+G+ DGEPGD++++++ + H F
Sbjct: 228 CKGCHGEKYENVSKILEVHVLPGMKHNDKITFKGDGDQSDPDGEPGDVVIVIQQKDHDIF 287
Query: 478 TRKADDLYTNVTISLQDALTGFTLELEHLDGHKVSVS--RDKVTWAGARVRKKGEGMPNF 305
R DDL+ +SL +AL G+ ++HLDGH + +S + V G G+GMPN
Sbjct: 288 KRDGDDLHMTKKLSLNEALCGYNFLIKHLDGHPLVLSSKQGDVIKPGVIRGVLGKGMPNK 347
Query: 304 ENNNLHGNLYVTFDIEFPKQDFTDAEKEALRKILNQPPNNKIYN 173
+ L GNL+V F++EFPK+ F D EK A + + P +K+ N
Sbjct: 348 KYPELKGNLFVEFEVEFPKEHFLDDEK-AYAVLKSCFPTSKVVN 390
>Z47356-1|CAA87414.2| 82|Caenorhabditis elegans Hypothetical
protein T15H9.1 protein.
Length = 82
Score = 101 bits (242), Expect = 5e-22
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = -3
Query: 409 LELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENNNLHGNLYVTFDIEFPKQDFTDA 230
+E++HLDGH V V RDKVTW GAR+RKK EGMP+ E+NN G L VTFD+EFPK + +D
Sbjct: 1 MEIQHLDGHIVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDE 60
Query: 229 EKEALRKILNQ-PPNNKIYNGL 167
+K + +IL Q K YNGL
Sbjct: 61 QKAQIIEILQQNTVKPKAYNGL 82
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/126 (32%), Positives = 70/126 (55%)
Frame = -3
Query: 622 EERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADDLYTNVT 443
E+++L + ++ G G K EG+ H + P D++ ++K + HP+F R+ D+
Sbjct: 193 EDKVLTVTIKPGWKSGTKITFPKEGDQHPNRTPADIVFVIKDKPHPKFKREGSDIKRVEK 252
Query: 442 ISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENNNLHGNLYVTFD 263
ISL+ ALTG + + LDG + + V G R G+G+PN ++ + G+L + FD
Sbjct: 253 ISLKSALTGLDIMIPTLDGADYRLQLNDVIKPGTTRRLTGKGLPNPKSPSHRGDLIIEFD 312
Query: 262 IEFPKQ 245
+EFP Q
Sbjct: 313 VEFPSQ 318
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 84.2 bits (199), Expect = 9e-17
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Frame = -3
Query: 670 MQQTVCDECPNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGE-PGDLIVILKTE 494
+++ C +C K V E+ ++E+ + G DG K G+G+ + E PGD +V+L
Sbjct: 189 LEKDRCKKCNGKKQVKEDEIIEVGITPGMKDGEKFVFEGKGDEVIGIEKPGDFVVVLDEV 248
Query: 493 RHPQFTRKADDLYTNVTISLQDALTGFTLELEHLDGHKV---SVSRDKVTWAGARVRKKG 323
H +F RK D+L I L +AL GF + LDG + + + + A +V
Sbjct: 249 EHEKFVRKGDNLIIQHNIDLSEALCGFVRTISTLDGRTIFYRVLPGEVIAHADVKV-IHN 307
Query: 322 EGMPNFENNNLHGNLYVTFDIEFPKQDFTDAEKE 221
EGMP ++ G+L V FD++FP + DA K+
Sbjct: 308 EGMPMRRASSDKGDLLVQFDVKFPDKINPDAAKK 341
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.7 bits (76), Expect = 0.070
Identities = 31/136 (22%), Positives = 58/136 (42%)
Frame = -3
Query: 655 CDECPNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFT 476
C EC + R + V G +G + + G+ L V +F
Sbjct: 245 CQECEGEGQTVQRRQVSFNVPAGTNNGDSLKFQ-VGK-------NQLFVRFNVAPSLKFR 296
Query: 475 RKADDLYTNVTISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENN 296
R+ DD++ +V ISL A+ G T+++ ++G V T + ++R G+G+ +
Sbjct: 297 REKDDIHCDVDISLAQAVLGGTVKVPGING-DTYVHIPAGTGSHTKMRLTGKGVKRLHSY 355
Query: 295 NLHGNLYVTFDIEFPK 248
+G+ Y+ + PK
Sbjct: 356 G-NGDQYMHIKVTVPK 370
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.7 bits (76), Expect = 0.070
Identities = 31/136 (22%), Positives = 58/136 (42%)
Frame = -3
Query: 655 CDECPNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFT 476
C EC + R + V G +G + + G+ L V +F
Sbjct: 245 CQECEGEGQTVQRRQVSFNVPAGTNNGDSLKFQ-VGK-------NQLFVRFNVAPSLKFR 296
Query: 475 RKADDLYTNVTISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENN 296
R+ DD++ +V ISL A+ G T+++ ++G V T + ++R G+G+ +
Sbjct: 297 REKDDIHCDVDISLAQAVLGGTVKVPGING-DTYVHIPAGTGSHTKMRLTGKGVKRLHSY 355
Query: 295 NLHGNLYVTFDIEFPK 248
+G+ Y+ + PK
Sbjct: 356 G-NGDQYMHIKVTVPK 370
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
W02C12.1 protein.
Length = 1372
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 718 RQEMVTRNLGPGRFQMMQQTVCDECPNVKFVNEERLLEIKVEVGAPD 578
R++ T PG+F + + C CP F NEE+ E ++ APD
Sbjct: 1090 REQCNTPKCKPGQFLVKETKNCQFCPRGTFQNEEQ--ESTCKLCAPD 1134
>Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical
protein C05B5.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 153 VYYHYSPLYILLFGGWFS-IFRKASF 227
+YY Y L +L+ GWF +FRK F
Sbjct: 261 LYYAYIALTVLMLTGWFDFVFRKHCF 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,631,519
Number of Sequences: 27780
Number of extensions: 353179
Number of successful extensions: 1023
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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