Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0006
(707 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 423 e-119
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 423 e-119
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 423 e-119
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 419 e-117
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 419 e-117
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 417 e-117
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 413 e-116
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 413 e-116
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 413 e-116
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 386 e-108
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 326 7e-90
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 282 1e-76
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 229 1e-60
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 161 3e-40
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 160 1e-39
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 105 4e-23
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 7e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 103 9e-23
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 100 2e-21
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 49 3e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 49 3e-06
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 36 0.020
At5g43500.2 68418.m05318 expressed protein 35 0.046
At5g43500.1 68418.m05319 expressed protein 35 0.046
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 34 0.080
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 34 0.080
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.11
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 34 0.11
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 33 0.14
At3g24550.1 68416.m03083 protein kinase family protein contains ... 33 0.14
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 33 0.14
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.14
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 33 0.14
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 33 0.14
At1g10620.1 68414.m01204 protein kinase family protein contains ... 33 0.25
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 33 0.25
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 32 0.32
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 32 0.32
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 32 0.32
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 32 0.43
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 32 0.43
At1g32190.1 68414.m03959 expressed protein 31 0.57
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.75
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.75
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 0.75
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 31 0.75
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 31 0.75
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 31 0.75
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 31 0.99
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 31 0.99
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 0.99
At2g40070.1 68415.m04923 expressed protein 31 0.99
At3g28790.1 68416.m03593 expressed protein 30 1.3
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 30 1.7
At1g61080.1 68414.m06877 proline-rich family protein 30 1.7
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 29 2.3
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 29 2.3
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 2.3
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 29 2.3
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 3.0
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 29 3.0
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 3.0
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 3.0
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 3.0
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 29 3.0
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 3.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 3.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.0
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 28 5.3
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 28 5.3
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 5.3
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 5.3
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 5.3
At5g29020.1 68418.m03592 hypothetical protein 28 7.0
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 7.0
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 7.0
At4g01985.1 68417.m00265 expressed protein 28 7.0
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 7.0
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 28 7.0
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 7.0
At2g23990.2 68415.m02866 plastocyanin-like domain-containing pro... 28 7.0
At2g23990.1 68415.m02865 plastocyanin-like domain-containing pro... 28 7.0
At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family... 28 7.0
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 7.0
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 27 9.2
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 27 9.2
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 27 9.2
At5g13260.1 68418.m01523 expressed protein 27 9.2
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.2
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 27 9.2
At3g51290.1 68416.m05614 proline-rich family protein 27 9.2
At3g05750.1 68416.m00646 expressed protein 27 9.2
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 27 9.2
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 27 9.2
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 9.2
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 423 bits (1043), Expect = e-119
Identities = 198/209 (94%), Positives = 204/209 (97%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTDYLMKILTERGYSFTT+AEREIVRD
Sbjct: 185 RDLTDYLMKILTERGYSFTTSAEREIVRD 213
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 423 bits (1041), Expect = e-119
Identities = 198/209 (94%), Positives = 203/209 (97%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTD+LMKILTERGYSFTTTAEREIVRD
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAEREIVRD 213
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 423 bits (1041), Expect = e-119
Identities = 198/209 (94%), Positives = 203/209 (97%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTD+LMKILTERGYSFTTTAEREIVRD
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAEREIVRD 213
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 419 bits (1031), Expect = e-117
Identities = 196/209 (93%), Positives = 201/209 (96%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTD LMKILTERGYSFTTTAEREIVRD
Sbjct: 185 RDLTDALMKILTERGYSFTTTAEREIVRD 213
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 419 bits (1031), Expect = e-117
Identities = 196/209 (93%), Positives = 201/209 (96%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTD LMKILTERGYSFTTTAEREIVRD
Sbjct: 185 RDLTDALMKILTERGYSFTTTAEREIVRD 213
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 417 bits (1028), Expect = e-117
Identities = 196/209 (93%), Positives = 201/209 (96%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTD LMKILTERGY FTTTAEREIVRD
Sbjct: 185 RDLTDSLMKILTERGYMFTTTAEREIVRD 213
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 413 bits (1018), Expect = e-116
Identities = 189/209 (90%), Positives = 202/209 (96%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTDYLMKILTERGY FTTTAEREIVRD
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRD 213
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 413 bits (1018), Expect = e-116
Identities = 189/209 (90%), Positives = 202/209 (96%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTDYLMKILTERGY FTTTAEREIVRD
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRD 213
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 413 bits (1018), Expect = e-116
Identities = 189/209 (90%), Positives = 202/209 (96%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAG 184
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLTDYLMKILTERGY FTTTAEREIVRD
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRD 213
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 386 bits (951), Expect = e-108
Identities = 173/209 (82%), Positives = 197/209 (94%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 260
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 261 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 440
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 441 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 185
Query: 621 RDLTDYLMKILTERGYSFTTTAEREIVRD 707
RDLT+YL KI+ ERGY++TT+AEREIVRD
Sbjct: 186 RDLTEYLTKIMMERGYTYTTSAEREIVRD 214
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 326 bits (802), Expect = 7e-90
Identities = 149/204 (73%), Positives = 175/204 (85%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 275
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 455
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 456 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 635
+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTD
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTD 178
Query: 636 YLMKILTERGYSFTTTAEREIVRD 707
YL++I+TERGY++TT+AEREIVRD
Sbjct: 179 YLIEIMTERGYTYTTSAEREIVRD 202
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 282 bits (692), Expect = 1e-76
Identities = 130/168 (77%), Positives = 151/168 (89%)
Frame = +3
Query: 204 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 383
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 384 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 563
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 564 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 707
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRD
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRD 165
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 229 bits (560), Expect = 1e-60
Identities = 101/206 (49%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 269
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 270 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 449
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 450 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 629
+N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186
Query: 630 TDYLMKILTERGYSFTTTAEREIVRD 707
T YL+ +L+ RGY+ TA+ E VR+
Sbjct: 187 TAYLVDLLSRRGYAMNKTADFETVRE 212
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 161 bits (392), Expect = 3e-40
Identities = 87/217 (40%), Positives = 128/217 (58%), Gaps = 22/217 (10%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 230
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 231 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 374
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 375 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 554
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G +
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGST 184
Query: 555 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 665
P+++GY L A++ L G LTD L+K L +G
Sbjct: 185 TISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 160 bits (388), Expect = 1e-39
Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 26/230 (11%)
Frame = +3
Query: 93 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 218
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 219 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 389
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 390 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVS 554
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAT 184
Query: 555 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 704
H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R
Sbjct: 185 HVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVAR 234
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 105 bits (251), Expect = 4e-23
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 275
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 455
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 456 NTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILR 605
++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI R
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKR 181
Query: 606 LDLAGRDLTDYLMKILTER 662
+DL G+ T+YL ++++ R
Sbjct: 182 IDLGGKAFTNYLKELVSYR 200
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 7e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 215
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 216 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 392
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 393 EAPLNPKANREK 428
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 103 bits (248), Expect = 9e-23
Identities = 71/182 (39%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Frame = +3
Query: 93 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 269
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 270 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 446
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 447 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 626
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTE 172
Query: 627 LT 632
LT
Sbjct: 173 LT 174
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 99.5 bits (237), Expect = 2e-21
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Frame = +3
Query: 96 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 275
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 276 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 437
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 438 IMFETFNTPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 602
++FET+ PA+ + A S L+ + GIVL G +H++P +G +
Sbjct: 138 LLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSS 197
Query: 603 RLDLAGRDLTDYLMKILT 656
R ++ G +TDYL ++L+
Sbjct: 198 RTNIGGYHVTDYLKQLLS 215
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 665
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 666 YSF 674
SF
Sbjct: 301 ISF 303
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 665
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 666 YSF 674
SF
Sbjct: 301 ISF 303
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
S PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 98 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
S PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 116 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 83 PPPPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S PP +PS P T PV PP TP+ SPTP T SP P
Sbjct: 134 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP----CPSTRDTHSPTP 597
S PP +PS P P P S +P V+PTP PS D +PTP
Sbjct: 182 SPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVPSPPDV-TPTP 232
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Frame = +1
Query: 337 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 516
+PS VSPP T + S S S PP P+ P PV
Sbjct: 126 VPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTP-SVPSPTPPV--PTDPMPSPPPPVS 182
Query: 517 PPVSCWTPATVSP---TPCPSTRDTHSP 591
PP TP+ SP TP P T SP
Sbjct: 183 PPPPTPTPSVPSPPDVTPTPPTPSVPSP 210
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/92 (22%), Positives = 46/92 (50%)
Frame = +3
Query: 375 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 554
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 555 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 650
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/92 (22%), Positives = 46/92 (50%)
Frame = +3
Query: 375 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 554
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 555 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 650
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 34.3 bits (75), Expect = 0.080
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 407 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 586
P + ED +V + Q+ +RR SRA A V + + R+ + H HL +R
Sbjct: 128 PLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRR 187
Query: 587 P 589
P
Sbjct: 188 P 188
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 34.3 bits (75), Expect = 0.080
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 460 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 609
+PP P P + T P P PA V P P P + +P P +W
Sbjct: 79 KPPQPQPQPP-QKPTAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 217 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 80
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 466 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 591
PC SP KP + +PV P PA +PTP PS + SP
Sbjct: 97 PCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPSP 137
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 466 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
P PS P +PV PP TP P P P +P P+
Sbjct: 48 PSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPA 92
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATV-SPTPCPSTRDTHSPTPSCV 606
PP P P +P PP P P PCPS +PTP V
Sbjct: 64 PPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/48 (47%), Positives = 24/48 (50%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S PP T PS P S T P PP S +P SP P P T T PTP
Sbjct: 526 SPSPPITVPSPP-STPTSPGSPP-SPSSPTPSSPIPSPPTPST-PPTP 570
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
C+ S+ PP S C R TR PVV P TP+ P PS SP+P
Sbjct: 384 CAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSI----SPSP 432
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 454 STRPPCTSPSKPC--SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
STRPP PS P S P P +S P TV P + P+PS V
Sbjct: 403 STRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIV 455
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
S +T P SP P + P+ P TP + P PS+ SP PS
Sbjct: 509 SSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPS 560
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 457 TRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
+ PPC SP P + P PP +PA SP P P +SP P
Sbjct: 749 SHPPCIEYSPPPPPTVHYNPPPPP----SPAHYSPPPSPPVYYYNSPPP 793
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 466 PCTSPSKPCSRCTRPVVPPVSCWTPATV---SPTPCPSTRDTHSPTPS 600
P SP P + T PP + P T SP P PST T SP PS
Sbjct: 11 PSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNST-SPPPS 57
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 454 STRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
S+ PP T+P S P S T PP S P ++ P P + P PS
Sbjct: 32 SSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPS 81
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPT 594
S +ST PP PS P P PP S TP P+P P T SPT
Sbjct: 48 STNSTSPP---PSSPLPPSLPPPSPPGSL-TPPLPQPSPSAPITPSPPSPT 94
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 460 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
+PP T P T PVV P + P PTP P +PTP +
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 454 STRPPCTSPSKPCSR-CTRPVVPPVSCWTPATVS-PTPCPSTRDTHSPTPSCV 606
+T+PP ++P P + P PP TP V+ PTP P +PTP V
Sbjct: 143 TTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVV 195
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
PP +P P T PV+ P + P PTP P +PTP +
Sbjct: 172 PPVVTPPTP----TPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI 215
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
PP +P P T PVV P + P PTP P +PTP V
Sbjct: 182 PPVITPPTP----TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
PP +P P T PV+ P + P PTP P +PTP V
Sbjct: 192 PPVVTPPTP----TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
PP +P P T PV+ P + P PTP P +PTP
Sbjct: 202 PPVITPPTP----TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 448 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
K T+PP ++P P ++ PP S P P P P T +PTP V
Sbjct: 129 KPPTKPPPSTPKPPTTK------PPPSTPKPPHHKPPPTPCPPPTPTPTPPVV 175
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +1
Query: 460 RPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
+PP P P S P PP S P T P P H P P+
Sbjct: 113 KPPIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPT 161
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 460 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
+PP T P + PP C P T PTP P +PTP +
Sbjct: 140 KPPTTKPPPSTPKPPHHKPPPTPC-PPPT--PTPTPPVVTPPTPTPPVI 185
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 573
PP +P P T PVV P + P PTP P T
Sbjct: 212 PPVITPPTP----TPPVVTPPTPTPPVVTPPTPTPPT 244
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
HS PP SP P + P PPV P V+P P ++ ++PTPS
Sbjct: 793 HSPPPPVHSPPPPSPIYSPP--PPVFSPPPKPVTPLPPATSPMANAPTPS 840
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP---CPSTRDTHSPTP 597
HS PP SP P P P S P SP P P HSP P
Sbjct: 725 HSPPPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPPP 776
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPCPSTR-DTHSPTPS 600
+T PP SP P + PPV+ PA ++ P P P+T+ D+ SP+PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 457 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 597
T PP +P+ P P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S PP T+ P + P PP +P SP P P P
Sbjct: 49 SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPP 96
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPCPSTR-DTHSPTPS 600
+T PP SP P + PPV+ PA ++ P P P+T+ D+ SP+PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 457 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 597
T PP +P+ P P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S PP T+ P + P PP +P SP P P P
Sbjct: 49 SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPP 96
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPCPSTRDTHSPTPS 600
+T+PP TSP P S T+ PP + P P P SP PS
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPS 89
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +1
Query: 463 PPC-----TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT-HSPTPSC 603
PPC T + C R + P PP+SC TP PCP + HS T C
Sbjct: 626 PPCLEMIFTDLTCACGRTSIP--PPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
+S+ PP SP+ CTRP PP P SP P P SP P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP-PEPYYYSSPPP 565
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S RPP +P P S + P P+ P SP P +SP P
Sbjct: 393 SPRPPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPP 440
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 594
C +RPP S C R P P V+ P ++ P P+ + PT
Sbjct: 372 CKAFLSRPPVNCGSFSCGRSVSPRPPVVTPLPPPSLPSPPPPAPIFSTPPT 422
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 457 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
T PP SP P P PP ++P P P P +SP P
Sbjct: 424 TSPPPPSPPPPVYSPPPPPPPPPPVYSPP--PPPPPPPPPPVYSPPP 468
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 561
S PP SP PC + P PPV + P T SP P
Sbjct: 521 SPPPPPPSPPPPCPESSPP--PPVVYYAPVTQSPPP 554
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 618
+S PP +S P R P PP S +P+ + P P + SP P V++ P
Sbjct: 422 YSPPPPPSSKMSPSVRAYSPPPPPYSKMSPSVRAYPPPPP--PSPSPPPPYVYSSP 475
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 454 STRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTP 561
+T PP T +P+ P + T P+VPPV+ P T++P P
Sbjct: 47 ATFPPVTITPTNPAT--TVPIVPPVTTIPPPTLTPPP 81
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = +1
Query: 466 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
P SP P S P PP S TP SP P P + SPTP
Sbjct: 217 PLPSPG-PDSPLPLPGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 463 PPCTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
PP +SP+ P S P PP TP SP P P D+ P+P
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTPGPDSPLPSPGP-DSPLPSP 277
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 597
+T PP T+ + P + P PPVS P TP P+ T P P
Sbjct: 36 TTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAP 85
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 457 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
T PP +P+ P + PV+ P TP P P++ T SP P
Sbjct: 72 TPPPAVTPTSPPAPKVAPVISPA---TPPPQPPQSPPASAPTVSPPP 115
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 466 PCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPCPS 570
P + P P S PV PP V +P ++ P P P+
Sbjct: 136 PASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPA 171
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWTPATVSPTPC 564
C K S C P+ CS C +P P SCW T C
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKCPDTEC 384
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
PP SPS P T P PP +P +P+P T P+PS
Sbjct: 118 PPDASPSPPAPTTTNP--PPKPSPSPPGETPSPPGETPSPPKPSPS 161
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 463 PPCTSPSKPC-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
PP SPS P + T P PP + +P + +PT PST PTP
Sbjct: 155 PPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTD-PSTL-APPPTP 198
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 618
S+ PP S P + P PPV P TV+ +P P SP PS T P
Sbjct: 53 SSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPV-VIASPPPSTPATTP 106
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S+ PP +SP T P S P V +P PST T P P
Sbjct: 62 SSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAP 109
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 448 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 573
K S PP +PS P + P P + T SP P P+T
Sbjct: 136 KPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPAT 177
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 395 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 523
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
HS PP S P + P PPV P SP P S +SP P
Sbjct: 594 HSPPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPP 642
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP--CPSTRDTHSPTP 597
HS PP SP P P PPV P SP P HSP P
Sbjct: 541 HSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPP 591
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 451 HSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
H P T+P KP T PV P T P+P P+T H P+P
Sbjct: 426 HKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTT-PVHEPSP 474
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 31.1 bits (67), Expect = 0.75
Identities = 29/91 (31%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Frame = +1
Query: 337 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 516
IPST S SPP S H T P SPS P + P
Sbjct: 81 IPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPT--PKKSPSPPPTPSLPPPA 138
Query: 517 PPVSCWTPATVSPTP---CPSTRDTHSPTPS 600
P S TP+ PTP P HS +PS
Sbjct: 139 PKKSPSTPSLPPPTPKKSPPPPPSHHSSSPS 169
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.1 bits (67), Expect = 0.75
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = +1
Query: 451 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
H T P T PS C S + P PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.1 bits (67), Expect = 0.75
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = +1
Query: 451 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
H T P T PS C S + P PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 594
CS PP P + T+PV PPV ++ T P+ P T SP+
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPV--FSAFTTEPSTAPFTPPPESPS 163
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 594
H+ +PP P P C P P P TV P P P + PT
Sbjct: 59 HTPKPPTVKPPPPYIPCPPPPYTP----KPPTVKPPPPPYVKPPPPPT 102
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPCPSTRDTHSPTPSCVWT*PV 621
PP +P P +P PPV P T + PCP T P P T P+
Sbjct: 130 PPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPPPKPETCPI 183
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPCPSTRDTHSPTP 597
++ +PP P P +P PP V P V P P P+ + PTP
Sbjct: 80 YTPKPPTVKPPPP--PYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTP 127
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 573
P SPS P P VP S TP+ SP P P T
Sbjct: 47 PKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVT 83
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 475 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 606
SP P + P +P S TP+ PTP T SP P+ V
Sbjct: 41 SPKVPSPKYPSPSIPSPSVPTPSV--PTPSVPTPSVPSPNPTPV 82
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
S T P PSK SR + P P++ + AT + P S SP P+
Sbjct: 295 SSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIKPSSPAPA 346
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTPS 600
S +T T S S P P S TP+T +P TP PST +PTPS
Sbjct: 258 SSGNTYKDTTGSSSGASPSGSPTPTP-STPTPSTPTPSTPTPSTPTPSTPTPS 309
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
+T PP +P P + PP + PAT P+ PS D + +P
Sbjct: 41 ATPPPVATPP-PAATPAPATPPPAATPAPATTPPSVAPSPADVPTASP 87
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 448 KHSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
KH PP T P KP P PP T P P P R +P P
Sbjct: 488 KHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPP 538
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 554 PHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 700
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 205 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 253
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 554 PHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 700
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 213 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 261
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVV----PPVSCWTPATVSPTPCPST---RDTHSPTPSCVWT*PV 621
PP T+ P PV+ PP ++P T SP P P T SP PS V+ PV
Sbjct: 641 PPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPV 700
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP--STRDTHSPTPSCVWT*PV 621
++T+ P P P PP + P T SP P P T SP P V+ PV
Sbjct: 613 YATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPV 671
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S +T PP +S P R T P PP S +P+ V P P + P+P
Sbjct: 466 SFRATPPPPSSKMSPSFRATPP--PPSSKMSPS-VKAYPPPPPPPEYEPSP 513
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 618
PP P R P +PPVS PA +P + P+P VW+ P
Sbjct: 252 PPVVDPPPATHRAPPVPRIPPVSGVPPAPFAPFAPLQPQQHPPPSPPLVWSPP 304
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 594
+ +PP TSP KP P PPV +P PT P T PT
Sbjct: 130 TVKPPTTSPVKP------PTTPPVQ--SPPVQPPTYKPPTSPVKPPT 168
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 460 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
+PP T+P T PV PP + P T +P P+ PTP V T
Sbjct: 165 KPPTTTPPVKPPTTTPPVQPPT--YNPPT-TPVKPPTAPPVKPPTPPPVRT 212
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 600
C+ P +P P + P VP TP+ SP+ P PS P+P+
Sbjct: 30 CNPSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSPN 83
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 473 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSR 625
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 167
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 473 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSR 625
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 178
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 473 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSR 625
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 208
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
S PP +SPS P PP +P++ P P PS+ S +PS
Sbjct: 37 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 84
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
S PP +SPS P PP +P++ P P PS+ S +PS
Sbjct: 86 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 133
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTRPVVPPV-SCWTPATVSPTPCPSTRD 579
C + PPC P P P +PP PA P P P T D
Sbjct: 70 CPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTPD 116
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 618
+S PP SP P + P P V P SP P HSP P V++ P
Sbjct: 550 YSPPPPVHSPPPPVY--SSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPP 603
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
HS PP SP P PP+ TP T +PTP S+ T PTPS
Sbjct: 623 HSPPPPVYSPPPPTFSPPPTHNTNQPPMGAPTP-TQAPTP--SSETTQVPTPS 672
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 240 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 419
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 420 REK 428
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 240 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 419
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 420 REK 428
REK
Sbjct: 225 REK 227
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 457 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
TRP T+PS + T V PVS P +V+P+P + + + P
Sbjct: 157 TRPTSTAPSPVSAHPTSVVPSPVSV-HPTSVAPSPVSACLTSEASKP 202
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
S+ ST P SP P S+ + + PP S P + SP P P + HSP P
Sbjct: 33 SECSTCPTICSP--PPSKPSPSMSPPPSPSLPLSSSPPPPPPHK--HSPPP 79
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 514 VPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
+PPV+ TP+ ++ P P T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +1
Query: 451 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
HS PP SP P + P PPV P SP P HSP P
Sbjct: 600 HSPPPPVHSPPPPVY--SPPPPPPVHSPPPPVFSPPP-----PVHSPPP 641
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 518 HRYRAGLRRRCL-PHRAHLRGIRTPPRHPASG 610
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 472 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT-PSCV 606
++P+KPC T PV PP + P PS + +PT PS V
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPSRGLSPNPTDPSGV 71
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 567
PP + P P + P+ PP S P +SP P P
Sbjct: 1087 PPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSP 1121
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +1
Query: 475 SPSKPCSRCTRPVVPPVSCWTPATVSP----TPCPSTRDTHSPT 594
+PS P + PV PP TP+ SP P P D + T
Sbjct: 89 NPSPPAPEGSTPVTPPAPPQTPSNQSPERPTPPSPGANDDRNRT 132
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -1
Query: 596 GVGECVSLVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 462
GVG V G VG V G +GG +G G G V GG
Sbjct: 507 GVGGGVRGAVGGAVGGGVGGAGRGSGGASGGAGAGGGAGGGVGGG 551
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -2
Query: 577 PS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATY-MAGVLNVSNMIWVIFSLLALGLR 401
PS + V ++PS S +PVV S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 400 GASVSRT---GCSSGAT 359
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 475 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
SPS P S + P P TP+T S P P + + S PS
Sbjct: 124 SPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPS 165
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 239
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g23990.2 68415.m02866 plastocyanin-like domain-containing
protein
Length = 226
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +1
Query: 484 KPCSRCTRPVVPPVSCWTPAT---VSPTPCP-STRDTHSPTPS 600
KP P +PP TPA PTP P S+ T +P P+
Sbjct: 154 KPGPAAVTPTLPPKPSTTPAAPAPAPPTPSPKSSTSTMAPAPA 196
>At2g23990.1 68415.m02865 plastocyanin-like domain-containing
protein
Length = 207
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +1
Query: 484 KPCSRCTRPVVPPVSCWTPAT---VSPTPCP-STRDTHSPTPS 600
KP P +PP TPA PTP P S+ T +P P+
Sbjct: 135 KPGPAAVTPTLPPKPSTTPAAPAPAPPTPSPKSSTSTMAPAPA 177
>At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family
protein similar to proline-rich cell wall protein
[Gossypium barbadense] gi|451544|gb|AAA79364; contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 124
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
PP T+ P T P PP + T P P PS++ P P+
Sbjct: 36 PPVTTTFPPLPTTTMPPFPPSTSLPQPTAFP-PLPSSQIPSLPNPA 80
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 320 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 213
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = +1
Query: 448 KHSTRPPCTSPS-KPCSRCTRPVVPPVSCWTPATVSPTPC---PSTRDTHSPTP 597
K +P T P KP T P P TP P P P+ + T +PTP
Sbjct: 52 KPKPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTP 105
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = +1
Query: 442 CSKHSTRPPCTSP---SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
CS + PP SP S P + C P PP S + P P S + P P
Sbjct: 43 CSPVQSSPPPPSPPPPSTPTTACPPPPSPPSSGGGSSYYYPPPSQSGGGSKYPPP 97
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 454 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
ST PP P + V P S T + SP+ PS + SP+ S
Sbjct: 662 STSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASPSAS 710
>At5g13260.1 68418.m01523 expressed protein
Length = 537
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 457 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
TR P ++ +KP + VVPP ++ + +P S R + P P
Sbjct: 103 TRNPSSTIAKPKPVASSAVVPPPKISRSSSPANSPAVSVRASQPPVP 149
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 193 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 71
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRP---VVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
PP T+P P + P + PP+S PA P P +T P P
Sbjct: 99 PPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKP 146
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVS------CWTPATVSPT-PCPSTRDTHSPTPSCVW 609
PP SPS P RP PP+S WT T S P P P PS W
Sbjct: 68 PP--SPSPPPPPPPRPPPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTW 121
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 81 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 257
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 258 RG--ILTLKYPIEHGIVTNWDDMEK 326
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCW-TPATVSPTPCPSTRDTHSPTP 597
P +P++P P PV+ T T P P P+T + +P P
Sbjct: 117 PVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAP 162
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 463 PPCTSPSKPCSRCTRPVVPPVSCW-TPATVSPTPCPSTRDTHSPTP 597
P +P++P P PV+ T T P P P+T + +P P
Sbjct: 117 PVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAP 162
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +3
Query: 306 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 485
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 486 AVLSLYASGRTTGIVL 533
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,130,929
Number of Sequences: 28952
Number of extensions: 429472
Number of successful extensions: 1909
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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