Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0002
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   5.6  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    23   9.8  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   9.8  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 502 HGSGVHHRSWSNSHHY 549
           HGS V H+S S+S+H+
Sbjct: 664 HGSEVAHQSSSSSNHH 679


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 431 RNVLECVRSLGQLPKPSLQRATG 363
           +N  ECV+  G LPK + +  +G
Sbjct: 58  QNARECVKETGILPKNAFRVLSG 80


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 457 GLYFERGAGLRMLWY 501
           G+ + +G GLR++W+
Sbjct: 228 GIAYRKGHGLRVVWF 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,266
Number of Sequences: 2352
Number of extensions: 12129
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)