Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0002
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 128 3e-30
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 118 2e-27
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 117 7e-27
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 66 2e-11
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 58 4e-09
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 58 5e-09
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 52 2e-07
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 52 4e-07
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 46 2e-05
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 42 3e-04
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 39 0.002
M77697-8|ABB88245.1| 308|Caenorhabditis elegans Hypothetical pr... 33 0.20
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70718-9|CAA94678.2| 371|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 28 5.8
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL034365-2|CAA22257.1| 366|Caenorhabditis elegans Hypothetical ... 28 5.8
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 28 5.8
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 28 5.8
AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical... 27 7.6
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 128 bits (309), Expect = 3e-30
Identities = 56/116 (48%), Positives = 79/116 (68%)
Frame = +2
Query: 245 TTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPE 424
+TG F+LT +Q + RKF DE+IPVAG+YDKT EYPW ++KKA G + IPE
Sbjct: 21 STGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPE 80
Query: 425 HCGGLGLGVFEACILSEELAYGCSGIMAAVYITEVGQTPIIIAGNKEQQKKYLGRL 592
GGLG+ + CI+SEE+AYGCSGI A+ ++ TP+I+ N + +K++LGR+
Sbjct: 81 AYGGLGVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRM 136
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 118 bits (285), Expect = 2e-27
Identities = 52/111 (46%), Positives = 76/111 (68%)
Frame = +2
Query: 260 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGL 439
FEL+D QK +Q A KF+KD ++P A ++DK+GE+PW +VK+A +G MN IPE GG
Sbjct: 23 FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGP 82
Query: 440 GLGVFEACILSEELAYGCSGIMAAVYITEVGQTPIIIAGNKEQQKKYLGRL 592
GL + ++ E L+YGCSG+ A++ + PI ++G +EQ+KKYLG L
Sbjct: 83 GLSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGML 133
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 117 bits (281), Expect = 7e-27
Identities = 49/111 (44%), Positives = 77/111 (69%)
Frame = +2
Query: 260 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGL 439
F+L++ QK +Q+ A KF+KD ++P A ++D++GE+PW +V++A +GLMN IPE GG
Sbjct: 29 FDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGP 88
Query: 440 GLGVFEACILSEELAYGCSGIMAAVYITEVGQTPIIIAGNKEQQKKYLGRL 592
G+ E ++ E L+YGC+GI + + P+ I+GN+EQ+KKYLG L
Sbjct: 89 GMTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGAL 139
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 66.1 bits (154), Expect = 2e-11
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 266 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGLGL 445
LT+ + + RKF+KD + P+ + DK + V + +E GLM H+PE GG G
Sbjct: 48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107
Query: 446 GVFEACILSEELAYGCSGIMAAVYITEVGQTPIII-AGNKEQQKKYLGRL 592
F A I+ EELA + A V I +II G +EQ+ KYL RL
Sbjct: 108 SFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYLPRL 157
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 58.4 bits (135), Expect = 4e-09
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +2
Query: 263 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGLG 442
+L++E+ ++ R+F + I P+ + D + V+ +E GLM IPE GG G
Sbjct: 39 QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98
Query: 443 LGVFEACILSEELAYGCSGIMAAVYITEVGQTPIII-AGNKEQQKKYLGRL 592
F+A ++ EELA + V + P+II G +EQ++KYL ++
Sbjct: 99 SSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKI 149
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 58.0 bits (134), Expect = 5e-09
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +2
Query: 242 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 415
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 416 IPEHCGGLGLGVFEACILSEELAYGCSGIMAAVYI-TEVGQTPIIIAGNKEQQKKYLGRL 592
P GG G+ F I EEL+ GI + + + I+ G++EQ+KKYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 58.0 bits (134), Expect = 5e-09
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +2
Query: 242 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 415
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 416 IPEHCGGLGLGVFEACILSEELAYGCSGIMAAVYI-TEVGQTPIIIAGNKEQQKKYLGRL 592
P GG G+ F I EEL+ GI + + + I+ G++EQ+KKYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +2
Query: 293 ELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGLGLGVFEACILS 472
E A +F K E+ P +DK GE P V++KA E+G + GG GL A ++
Sbjct: 36 EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIF 95
Query: 473 EELAYGCSGIMAAVYIT 523
E+L+ GC + A YI+
Sbjct: 96 EQLSMGC--VSTAAYIS 110
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 266 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGLGL 445
L + +K L E + F + + P+ + D+ ++KKA+++ LM I GG G+
Sbjct: 36 LNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKYGGSGV 95
Query: 446 GVFEACILSEELAYGCSGIMAAVYITEVGQTPIIIA-GNKEQQKKYLGRL 592
FE + EEL+ I +++ P+I GN+E ++KYL +L
Sbjct: 96 SFFELVLAVEELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLKKL 145
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 347 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGLGLGVFEACILSEELAYGCSGIMAAVYITE 526
D+T E V+ +E GLM +PE GG G F+A ++ EE++ + + A V +
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHN 61
Query: 527 VGQTPIII-AGNKEQQKKYL 583
P+II G ++Q++KYL
Sbjct: 62 TLFIPLIIELGTEKQKEKYL 81
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 404 MNGHIPEHCGGLGLGVFEACILSEELAYGCSGIMAAVYITEVGQTPIII-AGNKEQQKKY 580
M H+PE GG G F A I+ EELA + A V I +II G +EQ+ KY
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 60
Query: 581 LGRL 592
L RL
Sbjct: 61 LPRL 64
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 284 ALQELARKFTKDEIIPVAGQYDKTGEYPWP-VVKKAWEVGLMNGHIPEHCGGLGLGVFEA 460
A+Q K K++I P Q++K+G YP V K ++G+ + P GG G +
Sbjct: 31 AMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRDFAMS 90
Query: 461 CILSEEL-AYGCSGIMAAVYITEVGQTPIIIA-GNKEQQKKYL 583
++E++ A C I +V + TP + G+ + ++L
Sbjct: 91 IAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFL 133
>M77697-8|ABB88245.1| 308|Caenorhabditis elegans Hypothetical
protein B0303.16 protein.
Length = 308
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 428 CGGLGLGVFEACILSEELAYGCSGIMAAVYITEVGQTPIIIAGNKEQQKK 577
C GLGVF ILS LA+ S + AA+YI +G + ++ N + K
Sbjct: 13 CQLTGLGVFYTYILSFVLAFDLS-LTAALYIASLGAVLVFLSANYQFDNK 61
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 528 TSVMYTAAMIPEHP*ASSSLKIQASNTPKPRPPQCSGMCPFIRPTSQAFFTTGHGYSPV 352
TSV T++ P P +S + I AS P P PP P+ S A + + P+
Sbjct: 278 TSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPFHPL 336
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 528 TSVMYTAAMIPEHP*ASSSLKIQASNTPKPRPPQCSGMCPFIRPTSQAFFTTGHGYSPV 352
TSV T++ P P +S + I AS P P PP P+ S A + + P+
Sbjct: 280 TSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPFHPL 338
>Z70718-9|CAA94678.2| 371|Caenorhabditis elegans Hypothetical
protein C04G2.9 protein.
Length = 371
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +1
Query: 493 LWY-HGSGVHHRSWSN 537
LWY HG +H RSW+N
Sbjct: 37 LWYKHGKPIHGRSWNN 52
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -2
Query: 482 PAPRSKYRPRTLLNLDLRNV------LECVRSLGQLPKPSLQRATGTPPSYH 345
PAP S+ R R+L L R V C R++ LP P A G P +++
Sbjct: 141 PAPESRRRDRSLRRLSERIVGSDHIPAVCYRTIYTLPPPENFAAQGVPSAFN 192
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +1
Query: 493 LWY-HGSGVHHRSWSN 537
LWY HG +H RSW+N
Sbjct: 5 LWYKHGKPIHGRSWNN 20
>AL034365-2|CAA22257.1| 366|Caenorhabditis elegans Hypothetical
protein Y69E1A.2 protein.
Length = 366
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +1
Query: 493 LWY-HGSGVHHRSWSN 537
LWY HG +H RSW+N
Sbjct: 37 LWYKHGKPIHGRSWNN 52
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +1
Query: 493 LWY-HGSGVHHRSWSN 537
LWY HG +H RSW+N
Sbjct: 40 LWYKHGKPIHGRSWNN 55
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +1
Query: 493 LWY-HGSGVHHRSWSN 537
LWY HG +H RSW+N
Sbjct: 40 LWYKHGKPIHGRSWNN 55
>AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical
protein C38C3.8 protein.
Length = 188
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +1
Query: 493 LWY-HGSGVHHRSWSNS 540
LWY HGS + RSWSN+
Sbjct: 37 LWYEHGSPIFGRSWSNN 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,947,818
Number of Sequences: 27780
Number of extensions: 263565
Number of successful extensions: 662
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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