Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0001
         (367 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   3.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   6.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   6.9  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 103 CSTVLNCNR*VFRIVFVFLYRVHVCSVLS 17
           C+T++   +    ++F   Y  HVC  +S
Sbjct: 248 CTTLIGLIKNCVIVIFELYYLSHVCQNVS 276


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 63 LFLCSCTASMSVQCLVSLNY 4
          LF C  T    +  L+SL+Y
Sbjct: 19 LFYCYKTIKQHIYSLISLSY 38


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 63 LFLCSCTASMSVQCLVSLNY 4
          LF C  T    +  L+SL+Y
Sbjct: 19 LFYCYKTIKQHIYSLISLSY 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,151
Number of Sequences: 336
Number of extensions: 1714
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)