Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0001
(367 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 0.37
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 0.85
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 3.4
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 4.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 20 8.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 20 8.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 20 8.0
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 20 8.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 8.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 8.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 8.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 8.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 8.0
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 20 8.0
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 20 8.0
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.37
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +1
Query: 58 KQYGKLNGYS*ERCYRYP*NKQHA-SGEWSQSTNILKRTGSSSARRKLHNSNSWMSRQTS 234
+QY KL+ + K+++ S E Q KR S + R+ S
Sbjct: 17 RQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERERS 76
Query: 235 HRPPRLSSGASYISAWITKSNYRQIS*RYSTGHKK 339
P +S+ S + + +NY + Y+T +KK
Sbjct: 77 KEPKIISNNNSLSNNYNYNNNYNNYNNNYNTNYKK 111
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 0.85
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 93 FSTVTVEFSVLF-LCSCTASMSVQCLVSLN 7
F T+ + V F + SCTAS+ C++S++
Sbjct: 109 FGTIMCDLWVSFDVLSCTASILNLCMISVD 138
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 211 SWMSRQTSHRPPRLSSGASYI 273
+W +Q PP SSG +Y+
Sbjct: 1349 AWRQQQPPPPPPPPSSGQAYL 1369
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.0 bits (42), Expect = 4.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 95 GATDTLKTNNMQVANGVSQQIY 160
G T +K NN+ + G+ +IY
Sbjct: 44 GQTPLIKLNNIPKSYGIKCEIY 65
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 6.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 43 GTGTQKQYGKLNGYS*ERCYRYP*NKQHASGEWSQST 153
GTG Q + +LNG + E Y + + G+ +Q++
Sbjct: 376 GTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQAS 412
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 6.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 43 GTGTQKQYGKLNGYS*ERCYRYP*NKQHASGEWSQST 153
GTG Q + +LNG + E Y + + G+ +Q++
Sbjct: 376 GTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQAS 412
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 344 DGKWHKI 364
DGKWH I
Sbjct: 347 DGKWHNI 353
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 344 DGKWHKI 364
DGKWH I
Sbjct: 347 DGKWHNI 353
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -1
Query: 358 VPFPISLFCG 329
VP P+ ++CG
Sbjct: 119 VPIPVPIYCG 128
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 182 VPAESYTTAIPGCHV 226
+P+E+ +PGC V
Sbjct: 303 IPSEARELQLPGCEV 317
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 182 VPAESYTTAIPGCHV 226
+P+E+ +PGC V
Sbjct: 318 IPSEARELQLPGCEV 332
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 297 VRLSNPGTDIGGSA 256
+R S PG ++GGS+
Sbjct: 616 IRWSYPGEEMGGSS 629
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 358 VPFPISLFCG 329
VP PI ++CG
Sbjct: 334 VPVPIPIYCG 343
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 358 VPFPISLFCG 329
VP PI ++CG
Sbjct: 345 VPVPIPIYCG 354
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 358 VPFPISLFCG 329
VP PI ++CG
Sbjct: 345 VPVPIPIYCG 354
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 358 VPFPISLFCG 329
VP PI ++CG
Sbjct: 334 VPVPIPIYCG 343
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 20.2 bits (40), Expect = 8.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 270 IGGSAAKPRGAMRSLT*HPGIAVV*LSAGTT 178
IGG P G + + PG+ V AG T
Sbjct: 199 IGGIGTVPVGRVETGVLKPGMVVTFAPAGLT 229
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 8.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 270 IGGSAAKPRGAMRSLT*HPGIAVV*LSAGTT 178
IGG P G + + PG+ V AG T
Sbjct: 256 IGGIGTVPVGRVETGVLKPGMVVTFAPAGLT 286
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,036
Number of Sequences: 438
Number of extensions: 2294
Number of successful extensions: 40
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8680350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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