Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_P24
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056...    29   3.8  
02_05_0518 - 29703781-29703837,29703996-29704152,29704427-29704704     28   8.8  

>07_03_1710 -
           28903614-28903673,28904982-28905146,28905453-28905638,
           28905784-28905927,28906281-28906460,28906559-28907215
          Length = 463

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 118 TKCGNGTYKRERYRG-EKLFGHAEGAAGNRI 207
           ++CG   Y R+  RG + LFGHA+G    RI
Sbjct: 139 SRCGGRDYWRQFMRGLDYLFGHADGYGERRI 169


>02_05_0518 - 29703781-29703837,29703996-29704152,29704427-29704704
          Length = 163

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 544 PNSFITRTGRQHFHQWIS--FVVMKTALHSNDG 452
           P+  + +TG  +FH+W+S  F   K A+ + DG
Sbjct: 78  PDMLVVQTGGCNFHRWLSTFFKCDKAAIDARDG 110


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,788,737
Number of Sequences: 37544
Number of extensions: 461019
Number of successful extensions: 960
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)