Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_P24
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045645-1|AAC02605.1|  301|Caenorhabditis elegans Hypothetical ...    95   8e-20
Z81536-3|CAB63200.1|  333|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AF098994-3|AAT81188.1|  455|Caenorhabditis elegans Hypothetical ...    29   6.0  
AF098994-2|AAT81187.1|  505|Caenorhabditis elegans Hypothetical ...    29   6.0  
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z81088-10|CAB03131.1|  337|Caenorhabditis elegans Hypothetical p...    28   7.9  
U61949-2|AAB03152.1|  884|Caenorhabditis elegans Puromycin-sensi...    28   7.9  
U61949-1|AAY44009.1|  948|Caenorhabditis elegans Puromycin-sensi...    28   7.9  
U41993-1|AAO12433.1|  390|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AF045645-1|AAC02605.1|  301|Caenorhabditis elegans Hypothetical
           protein K02D7.1 protein.
          Length = 301

 Score = 94.7 bits (225), Expect = 8e-20
 Identities = 47/109 (43%), Positives = 71/109 (65%)
 Frame = +3

Query: 510 CCLPVRVMKLLGVKILIATNAAGGLNPNYKIGDLMIVRDHINMMGFAGNNPLHGPNDERF 689
           C LPVRVM  LG+KI+I +NAAGG+N   + GDLM+++DHI +   AG +PL G ND RF
Sbjct: 115 CTLPVRVMHQLGIKIMIVSNAAGGINAVLRHGDLMLIKDHIFLPALAGFSPLVGCNDPRF 174

Query: 690 GPRFPPMNKAYNYEFRKIAKEVAKELTLIIL*GKGVIHVWAGQISRQSP 836
           G RF  ++ AY+ + R++A +V +   + +  G   ++V +G    +SP
Sbjct: 175 GARFVSVHDAYDKQLRQLAIDVGRRSDMTLYEG---VYVMSGGPQYESP 220



 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = +2

Query: 335 LAESIADGVRIPYEDIPNFPISTVEGHHGQLVFGHIEGVSVVAMQGRFHYYE 490
           + +++ D   +PY  IP FP + V GH G ++FG + G  VV +QGRFH YE
Sbjct: 56  IGDTVQDATILPYSKIPGFPTTHVVGHKGNMIFGKLGGKKVVCLQGRFHPYE 107


>Z81536-3|CAB63200.1|  333|Caenorhabditis elegans Hypothetical
           protein F40D4.3 protein.
          Length = 333

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 231 VFSFPLQSDPISGSTFCVTKQFFSTISFAFIGAITTLSYP 112
           +F   L+S PIS ST  + +QFF  +S   I  I  +++P
Sbjct: 218 IFRHLLKSTPISRSTIRLQQQFFIAMSMQVILPIVIIAFP 257


>AF098994-3|AAT81188.1|  455|Caenorhabditis elegans Hypothetical
           protein T06A4.3b protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 132 WHL*TRTISWRKIVWSRRRCCRKSDL 209
           W      +  RK +W R RCCR  DL
Sbjct: 245 WRKNRSKMQCRKDIWGRNRCCRGVDL 270


>AF098994-2|AAT81187.1|  505|Caenorhabditis elegans Hypothetical
           protein T06A4.3a protein.
          Length = 505

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 132 WHL*TRTISWRKIVWSRRRCCRKSDL 209
           W      +  RK +W R RCCR  DL
Sbjct: 245 WRKNRSKMQCRKDIWGRNRCCRGVDL 270


>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
           protein C04A11.3 protein.
          Length = 1228

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 451 HSFYVTENKLTMMTLHCAYGKVWNIFV 371
           +S Y  ENKLTM+   C  G V NI V
Sbjct: 97  YSTYFFENKLTMLLEFCGGGAVDNIIV 123


>Z81088-10|CAB03131.1|  337|Caenorhabditis elegans Hypothetical
           protein F53F1.10 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 433 RSHRRSVRRCYAGPFSLLRRISTGGSV 513
           R +R++V+R  A PF +L   +TG S+
Sbjct: 291 RPYRQNVKRFIANPFKILLNTNTGSSI 317


>U61949-2|AAB03152.1|  884|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform a
           protein.
          Length = 884

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 294 FSDILDSKKFAVSTNVS*EYPVFSFPLQSDPISGSTFCVT 175
           + D   ++KF  ST     Y  ++FP   +PI  +TF VT
Sbjct: 126 YKDKNGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVT 165


>U61949-1|AAY44009.1|  948|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform b
           protein.
          Length = 948

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 294 FSDILDSKKFAVSTNVS*EYPVFSFPLQSDPISGSTFCVT 175
           + D   ++KF  ST     Y  ++FP   +PI  +TF VT
Sbjct: 190 YKDKNGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVT 229


>U41993-1|AAO12433.1|  390|Caenorhabditis elegans Hypothetical
           protein F44A2.5b protein.
          Length = 390

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 511 HFHQWISFVVMKTALHSNDG 452
           HF  WISF+   T L+SN G
Sbjct: 267 HFRMWISFIQFLTELYSNLG 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,542,032
Number of Sequences: 27780
Number of extensions: 404764
Number of successful extensions: 968
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)