Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_P22
(1034 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.038
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.050
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.050
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.61
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.61
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.81
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.9
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 10.0
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.038
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 827 GRXXTXPPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPP 991
G P + PP R PP A PPPP P PP P PP
Sbjct: 1680 GMAPAHPVSTPPVRP--QSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 30.3 bits (65), Expect = 0.46
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = +2
Query: 824 PGRXXTXPPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXP 976
P + PP P + P P P PPP P PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 30.3 bits (65), Expect = 0.46
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 845 PPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXD 940
PP+ PP PPPP PA P P D
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVPNPGD 1748
Score = 28.3 bits (60), Expect = 1.9
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +3
Query: 846 PQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXP 1004
PQ PP S PPPP P PP PP S PP P ++ P
Sbjct: 1694 PQSAAPPQM-SAPTPPPP-PMSVPPPPSAPPMPAGPP---SAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 940 PXPXPPPXXXXPPXXAPRRP 999
P P PPP PP AP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMP 1724
Score = 25.8 bits (54), Expect = 10.0
Identities = 14/57 (24%), Positives = 15/57 (26%)
Frame = +3
Query: 861 PPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXPGPXXRXXNP 1031
PP PP PP PP + PP PP NP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.050
Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Frame = +3
Query: 828 AXGXPXPQPXPPPAXXSXXXPP--PPXPRXXNLPPXXXXTXXXPP---PXXSXPPXXXPP 992
A P P P P S P PP P +PP + PP P + PP P
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Query: 993 ATXPGP 1010
P P
Sbjct: 1119 GAPPVP 1124
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 857 PPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPP 991
PP PP P PA PP P + P P P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 32.3 bits (70), Expect = 0.12
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP---PXXSXPPXXXPPATXPGP 1010
P P PP PP P P LPP T PP P P P ++ P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSA-GLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 31.1 bits (67), Expect = 0.27
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLP-PXXXXTXXXPPPXXSXPPXXXPPATXPGP 1010
P P PP PP P P P P P P + PP P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 31.1 bits (67), Expect = 0.27
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXP 1004
P P PP S PP P P +PP PP PP PP P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAP-SSGIPPVPKPAAGVPP---VPPPSEAPPVPKP 1203
Score = 30.7 bits (66), Expect = 0.35
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP---PXXSXPPXXXPPATXP 1004
P P PP S PP P P PP + PP P PP P A P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAP--SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Score = 30.3 bits (65), Expect = 0.46
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP---PXXSXPPXXXPPATXP 1004
P P PP S PP P P PP + PP P PP P + P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPS--TAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 29.9 bits (64), Expect = 0.61
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP---PXXSXPPXXXPPATXPGP 1010
P P PP PP P P PP + PP P PP P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVA-APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 29.9 bits (64), Expect = 0.61
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Frame = +3
Query: 840 PXPQPX---PPPAXXSXXXPPPPXPRXXNLP-PXXXXTXXXPPPXXSXPPXXXPPATXPG 1007
P P+P PP S PP P P P P P P PP P P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 1008 P 1010
P
Sbjct: 1220 P 1220
Score = 29.9 bits (64), Expect = 0.61
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLP-PXXXXTXXXPPPXXSXPPXXXPPATXP 1004
P P PP PP P P P P P P PP P A P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP-PXXSXPPXXXPPATXPGP 1010
P P PP S PP P P PP + PP P S P P+ P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVP--SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/58 (27%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Frame = +3
Query: 846 PQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP---PXXSXPPXXXPPATXPGP 1010
P+ PP A S P +PP + PP P PP P P P
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +2
Query: 845 PPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPP 991
P PP PP P P+ PP P P P P P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Frame = +3
Query: 840 PXPQPX---PPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP--PXXSXPPXXXPPATXP 1004
P P P PP + PP P P PP + PP P + PP P A P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPS--EAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 857 PPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXP 988
PP PP P P+ P P PPP P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 845 PPTXPPTRXXLXXXPPPPXPAXQXPPPP 928
P T PP PP P P + PP P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 27.1 bits (57), Expect = 4.3
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +3
Query: 840 PXPQPX---PPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPP-PXXSXPPXXXPPATXPG 1007
P P+P PP S PP P P PP + PP P S P P+
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAP--SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 1008 P 1010
P
Sbjct: 1151 P 1151
Score = 25.8 bits (54), Expect = 10.0
Identities = 15/58 (25%), Positives = 16/58 (27%)
Frame = +2
Query: 857 PPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGDXXXAXXXSPXP 1030
PP PP P P+ PP P P P P A P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.050
Identities = 22/56 (39%), Positives = 22/56 (39%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXPG 1007
P P P PPPA PPPP PP PPP PP PPA G
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPP------PPGVAGAGPPPPP----PP---PPAVSAG 788
Score = 33.1 bits (72), Expect = 0.066
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 875 LXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGDXXXAXXXSPXP 1030
L PPPP PA P P P P P P PP P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 32.7 bits (71), Expect = 0.087
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +2
Query: 845 PPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPP 991
PP PP + P P P PP P + P PPP PP
Sbjct: 732 PPPPPPA---VIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 30.3 bits (65), Expect = 0.46
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 834 GXPXPQPXPPPAXXSXXXPPPPXP 905
G P P P PP + PPPP P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 834 GXPXPQPXPPPAXXSXXXPPPPXP 905
G P P P P A PPPP P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +2
Query: 887 PPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGDXXXAXXXSPXP 1030
PPPP P P + P P P PPG P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/65 (27%), Positives = 18/65 (27%), Gaps = 3/65 (4%)
Frame = +2
Query: 845 PPTXPPTRXXLXXXPPPPXP---AXQXPPPPXLXDPXXXPPPKXXXPXXXPPGDXXXAXX 1015
P PT PPP P PPPP PPP P G A
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPA 796
Query: 1016 XSPXP 1030
P
Sbjct: 797 PQAEP 801
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 815 VXGPGRXXTXPPTXPPTRXXLXXXPPPPXPAXQXPPP 925
V P PP PP PPPP P PPP
Sbjct: 751 VPPPAPIMGGPPPPPPPPGVAGAGPPPPPP----PPP 783
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 858 PPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXPGP 1010
PPP + P P PP PPP PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.61
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 825 LAXGXPXPQPXPPPAXXSXXXPPPPXP 905
L G P P P PPP PPPP P
Sbjct: 4 LPPGNPPP-PPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 893 PPXPAXQXPPPPXLXDPXXXPPP 961
PP PPPP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 10.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 940 PXPXPPPXXXXPPXXAPRRPXXG 1008
P P PPP PP P P G
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.61
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +2
Query: 821 GPGRXXTXPPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDP--XXXPPP 961
G PP PP P PP PPPP P PPP
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPP--PPXP-RXXNLPPXXXXTXXXPPPXXS 968
P P P PPP+ + PP PP P ++ P T P P S
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +2
Query: 824 PGRXXTXPPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXP-PPKXXXPXXXP 988
P + PP+ PP+ PP P+ PP P P PP P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.1 bits (57), Expect = 4.3
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 18/74 (24%)
Frame = +3
Query: 825 LAXGXPXPQPXPPP-------------AXXSXXXPPPPXPR-----XXNLPPXXXXTXXX 950
LA P P PPP + S PPPP PR LPP
Sbjct: 304 LAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Query: 951 PPPXXSXPPXXXPP 992
PPP + PP
Sbjct: 364 PPPRSAPSTGRQPP 377
Score = 27.1 bits (57), Expect = 4.3
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +3
Query: 840 PXPQPXPPPAXXSXXXPPPPXPRXXNLPP-XXXXTXXXPPPXXSXPPXXXPPATXP 1004
P P P A S PP PP T PPP S PPA P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.1 bits (57), Expect = 4.3
Identities = 17/63 (26%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +2
Query: 845 PPTXPPTRXX-LXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGDXXXAXXXS 1021
PP+ PP+ L PP P PP PP P P A +
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 1022 PXP 1030
P P
Sbjct: 480 PAP 482
Score = 25.8 bits (54), Expect = 10.0
Identities = 14/56 (25%), Positives = 15/56 (26%)
Frame = +2
Query: 824 PGRXXTXPPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPP 991
P PP PPP P P P L + P P PP
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Score = 25.8 bits (54), Expect = 10.0
Identities = 18/68 (26%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +2
Query: 830 RXXTXPPTXPPTRXXLXXXPPPPXP-AXQXPPPPXLXDPXXXPPPKXXXPXXXPPGDXXX 1006
R + PP PP PP A + PP P P P PP
Sbjct: 383 RAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG 442
Query: 1007 AXXXSPXP 1030
A P P
Sbjct: 443 APAAPPLP 450
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.5 bits (63), Expect = 0.81
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 852 PXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXPG 1007
P PP P PP P +P PP + PP PA PG
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGM--PAPFPG 541
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 1029 GXGDXXXAXXXSPGGXXXGXXXXGGGXXXGSXXXGGGGXCXAGXGGGG 886
G G PGG G GGG GG G G GG G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.1 bits (57), Expect = 4.3
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 1009 GPGXVAGGXXXGGXXLXGGGXXXVXXXWGGRXLXRGXGGGGXXXEXXAGGGXGWGXG 839
GPG G GG GG GG G GGG GG G G G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = -3
Query: 1029 GXGDXXXAXXXSPGGXXXGXXXXGGGXXXGSXXXGGGGXCXAGXGGGGSXXRXXRVGGWV 850
G G PGG G G G GGG G GG GG +
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 849 GG 844
GG
Sbjct: 252 GG 253
Score = 26.2 bits (55), Expect = 7.6
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -2
Query: 1030 GXXXRXXGPGXVAGGXXXGGXXLXGGGXXXVXXXWGGRXLXRGXGGGGXXXEXXAGGGXG 851
G G G GG GG GG +GG G G GG GG G
Sbjct: 215 GEGHHHGGHGGFGGGP--GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Query: 850 W 848
W
Sbjct: 273 W 273
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = +3
Query: 846 PQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXP 1004
P PP S PP P ++PP + P P PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +3
Query: 828 AXGXPXPQPXPPPAXXSXXXPPPPXPRXXNLPPXXXXTXXXPPPXXSXPPXXXPPATXPG 1007
A P P PP P PR PP P P PPA
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
Query: 1008 P 1010
P
Sbjct: 180 P 180
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 845 PPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGDXXXAXXXSP 1024
PPT P R + PP P A P PP + P PP P
Sbjct: 139 PPTSAPPRPSIP--PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 1025 XP 1030
P
Sbjct: 197 MP 198
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/69 (26%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +2
Query: 821 GPGRXXTXPPTXP-PTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
G PP+ P P PP P PPP P P PP
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Query: 998 XXXAXXXSP 1024
A SP
Sbjct: 176 QPAAPVKSP 184
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 824 PGRXXTXPPTXPPTRXXLXXXPPPPXPAXQXPPPPXLXDPXXXPPPKXXXP 976
P P PP L P P P P L PPK P
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 244
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 257
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 270
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 283
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 296
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 309
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 322
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPPKXXXPXXXPPGD 997
PPPP P PPPP +P PP P PG+
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGE 335
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +2
Query: 887 PPPPX---PAXQXPPPPXLXDPXXXPPP 961
PPPP P PPPP +P PP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPP 339
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 3.3
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 557 GXXXGGRGXXXXGRGGPEXXGXXSXAGXWXPXXXXXXGGGXXXAGXXGA 411
G GGRG GRGG G G G G G GA
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Score = 27.5 bits (58), Expect = 3.3
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 991 GGXXXGGXXLXGGGXXXVXXXWGGRXLXRGXGGGGXXXEXXAGGG 857
GG G GGG GGR RG GG A GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 27.1 bits (57), Expect = 4.3
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = -3
Query: 990 GGXXXGXXXXGGGXXXGSXXXGGGGXCXAGXGGGGSXXRXXRVGGWVGG 844
GG G GGG G GG G G GG G R R GG GG
Sbjct: 19 GGFNGGRGGFGGG--RGGARGGGRGGARGGRGGRGG-ARGGR-GGSSGG 63
Score = 25.8 bits (54), Expect = 10.0
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = -3
Query: 996 SPG--GXXXGXXXXGGGXXXGSXXXGGGGXCXAGXGGGGSXXRXXRVGGWVGG 844
+PG G G GG G GGG G G GG+ GG GG
Sbjct: 4 TPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +2
Query: 845 PPTXPPTRXXLXXXPPPPXPAXQXP--PPPXLXDPXXXPPPKXXXPXXXPP 991
PPT PT PPPP + P PP L P PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPP 781
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 10.0
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = -1
Query: 590 GXXXPHXXRXXGXXXGGRGXXXXGRGGPEXXGXXSXAGXWXPXXXXXXGGGXXXAGXXG 414
G P R GGRG GRGG + G + GGG G
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,836,867
Number of Sequences: 5004
Number of extensions: 25377
Number of successful extensions: 345
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 541237406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -