Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_P21
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 207 1e-53
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 207 1e-53
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 207 1e-53
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 207 1e-53
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 207 1e-53
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 207 1e-53
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 207 1e-53
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 206 1e-53
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 205 3e-53
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 202 3e-52
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 201 5e-52
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 121 6e-28
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 94 1e-19
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 93 3e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 63 3e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.018
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.018
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 31 1.5
U82968-1|AAB40927.1| 281|Caenorhabditis elegans MAD-like-1 homo... 30 2.0
U40947-2|AAC48067.1| 281|Caenorhabditis elegans Mad-like protei... 30 2.0
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 30 2.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 3.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 3.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 3.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 3.6
Z49967-1|CAA90247.1| 161|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 4.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.2
Z27079-13|CAA81597.2| 195|Caenorhabditis elegans Hypothetical p... 28 8.2
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 28 8.2
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 207 bits (505), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDSGDGVT-HTVPIYEGYALP 173
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 207 bits (505), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGI-VLDSGDGVT-HTVPIYEGYALP 173
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 207 bits (505), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDSGDGVT-HTVPIYEGYALP 173
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 207 bits (505), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDSGDGVT-HTVPIYEGYALP 173
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 207 bits (505), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDSGDGVT-HTVPIYEGYALP 173
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 207 bits (505), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDSGDGVT-HTVPIYEGYALP 173
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 207 bits (505), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDSGDGVT-HTVPIYEGYALP 173
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 206 bits (504), Expect = 1e-53
Identities = 113/177 (63%), Positives = 121/177 (68%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEK 534
QSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKA EK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 535 MTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSPHRAPSTXG*ALP 705
MT IMFETFNTPAMYVAIQ+ L+ TTG GV+ H P G ALP
Sbjct: 120 MTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGI-VLDSGDGVT-HTVPIYEGYALP 173
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 205 bits (501), Expect = 3e-53
Identities = 104/138 (75%), Positives = 108/138 (78%)
Frame = +1
Query: 292 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVA 471
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 472 PEEHPVLLTEAPLNPKAXXEKMTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXP 651
PEEHPVLLTEAPLNPKA EKMT IMFETFNTPAMYVAIQ+ L+ TTG
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDS 142
Query: 652 XXGVSPHRAPSTXG*ALP 705
GV+ H P G ALP
Sbjct: 143 GDGVT-HTVPIYEGYALP 159
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 231 KAGFAGDDAPRAVFPSIVGRPRHQG 305
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 202 bits (493), Expect = 3e-52
Identities = 102/132 (77%), Positives = 105/132 (79%)
Frame = +1
Query: 310 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPV 489
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 490 LLTEAPLNPKAXXEKMTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXPXXGVSP 669
LLTEAPLNPKA EKMT IMFETFNTPAMYVAIQ+ L+ TTG GV+
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA-VLSLYASGRTTGV-VLDSGDGVT- 117
Query: 670 HRAPSTXG*ALP 705
H P G ALP
Sbjct: 118 HTVPIYEGYALP 129
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 201 bits (491), Expect = 5e-52
Identities = 101/138 (73%), Positives = 107/138 (77%)
Frame = +1
Query: 292 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVA 471
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 472 PEEHPVLLTEAPLNPKAXXEKMTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWXP 651
PEEHPVLLTEAPLNPK+ EKMT IMFETFNTPAMYV IQ+ L+ TTG
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQA-VLSLYASGRTTGI-VLDT 155
Query: 652 XXGVSPHRAPSTXG*ALP 705
GV+ H P G ALP
Sbjct: 156 GDGVT-HTVPIYEGYALP 172
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 225 MCKAGFAGDDAPRAVFPSIVGRPRHQG 305
MCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 121 bits (292), Expect = 6e-28
Identities = 61/138 (44%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Frame = +1
Query: 292 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTF-YNELRV 468
P VM G D ++G +A+S RG+ +++YP+EHGIV NW DM KIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 469 APEEHPVLLTEAPLNPKAXXEKMTXIMFETFNTPAMYVAIQSRALAXXXXXXTTGYRAWX 648
PEEHPVLLT+APLNP E+ I FETFN PA+Y+ +Q+ L+ TTG
Sbjct: 101 FPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQA-VLSLYATGRTTGV-VLD 158
Query: 649 PXXGVSPHRAPSTXG*AL 702
GV+ H P G A+
Sbjct: 159 SGDGVT-HAVPIVKGFAM 175
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 231 KAGFAGDDAPRAVFPSIVGRPRH 299
KAGFAG+ P+ F + VGRP++
Sbjct: 21 KAGFAGEQQPKVRFANFVGRPKY 43
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 96.3 bits (229), Expect = 3e-20
Identities = 52/87 (59%), Positives = 57/87 (65%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKI 435
QSKRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 96.3 bits (229), Expect = 3e-20
Identities = 52/87 (59%), Positives = 57/87 (65%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKI 435
QSKRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 96.3 bits (229), Expect = 3e-20
Identities = 52/87 (59%), Positives = 57/87 (65%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDMXKI 435
QSKRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 94.3 bits (224), Expect = 1e-19
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +1
Query: 328 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNE-LRVAPEEHPVLLTEA 504
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 505 PLNPKAXXEKMTXIMFETFNTPAMYVAIQS 594
PLNP + EKM +MFE + ++YVA+Q+
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQA 142
Score = 31.9 bits (69), Expect = 0.67
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 231 KAGFAGDDAPRAVFPSIVGRP 293
K G+AG + P +FPS+VGRP
Sbjct: 19 KCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +1
Query: 307 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEH 483
V G+ D ++GDEA S T+KYPI HGIV +WD M + W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 484 PVLLTEAPLNPKAXXEKMTXIMFETFNTPAMYVAIQS 594
LLTE PLN E IMFE+FN P +Y+A+Q+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQA 152
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 93.1 bits (221), Expect = 3e-19
Identities = 50/84 (59%), Positives = 55/84 (65%)
Frame = +1
Query: 175 MCDEXVAAIGSRQWLRXCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEA 354
MCD+ VAA+ C + + A P P + VMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 355 QSKRGILTLKYPIEHGIVTNWDDM 426
QSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 391 IEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAXXEKMTXIMFETFNTP 570
++ G++ +W+ KI H++ N L P EHPVL +E+ N +A EK+T IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 571 AMYVA 585
A Y++
Sbjct: 154 AYYLS 158
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.018
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +1
Query: 325 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLT 498
+K +V E + +L Y PIE G V NWD +IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 499 EAPLNPKAXXEKMTXIMFETFNTPAMYVAIQSRALA 606
+ A + + I+F+ F ++ S +A
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVA 133
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.018
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +1
Query: 325 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLT 498
+K +V E + +L Y PIE G V NWD +IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 499 EAPLNPKAXXEKMTXIMFETFNTPAMYVAIQSRALA 606
+ A + + I+F+ F ++ S +A
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVA 133
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/86 (25%), Positives = 34/86 (39%)
Frame = +3
Query: 459 AACRPRGTPSPAH*GSPQPQGXXREDDPXHVRNIQHARHVRRHPKPCSRCTRPGPYHRVS 638
A CR R P+ QPQ + H+ + A P P + +P P+H ++
Sbjct: 1937 AVCRERPHPTTVISPPQQPQ----QPKKMHIPPVTRATSP---PPPAQKSPQPAPFHSIT 1989
Query: 639 CLXSGXRCLPTPCPIYXRIGPSPTPS 716
S P P P+ +G P P+
Sbjct: 1990 EPLSVIIDYPVPPPLGSLVGLPPMPA 2015
>U82968-1|AAB40927.1| 281|Caenorhabditis elegans MAD-like-1 homolog
protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 572 PCTSPSKAVLSLYASGSVPPGIVPGLRXKVSPHTVPHLXKDRPFPHXI 715
P S ++ LYA G +P G + R V PH V L P P +
Sbjct: 224 PMDSHKPTIIDLYAEGLIPRGPITFPRPLVYPHNVFDLMNLPPTPFDV 271
>U40947-2|AAC48067.1| 281|Caenorhabditis elegans Mad-like protein 1
protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 572 PCTSPSKAVLSLYASGSVPPGIVPGLRXKVSPHTVPHLXKDRPFPHXI 715
P S ++ LYA G +P G + R V PH V L P P +
Sbjct: 224 PMDSHKPTIIDLYAEGLIPRGPITFPRPLVYPHNVFDLMNLPPTPFDV 271
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +3
Query: 228 CKAGFAGDDAPRAV--FPSIVGRPRHQGXDGRYGTEG 332
C AG G PR P I G P G GR+GT G
Sbjct: 161 CPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 462 ACRPRGTPSPAH*GSPQPQGXXREDDPXHVRNIQ---HARHVRRH 587
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 462 ACRPRGTPSPAH*GSPQPQGXXREDDPXHVRNIQ---HARHVRRH 587
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 462 ACRPRGTPSPAH*GSPQPQGXXREDDPXHVRNIQ---HARHVRRH 587
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 462 ACRPRGTPSPAH*GSPQPQGXXREDDPXHVRNIQ---HARHVRRH 587
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>Z49967-1|CAA90247.1| 161|Caenorhabditis elegans Hypothetical
protein F54C9.1 protein.
Length = 161
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -1
Query: 309 HXPDGGA---FPRS-RGTRREEHHLLRNRPCTXPEPLSTTNRGNXFVAHLELV 163
H D GA FP+ R+ EH +++ RPC E +ST+ G A + +V
Sbjct: 12 HTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVE-MSTSKTGKHGHAKVHMV 63
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +2
Query: 746 TSXTNPHEXSSXXAAXYWXPFPXPEXGXFFGXIXGKTXXXRPPLEXPXPRKXAPPXXXTP 925
TS T P +S + P P P GKT +PP P P PP P
Sbjct: 257 TSPTKPPTPTSRPTSAPTIP-PQPSANSTRAPDIGKTLSTQPPRRTPQPHPKPPPPPPPP 315
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = +3
Query: 663 LPTPCPIYXRIGPSPTPSXRXGL*PGXXPHXLTXMKXPXXXPRXIGXPSXRPXXEXSSVX 842
+P P P + P P P G+ P P P P G P P
Sbjct: 273 MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPG 329
Query: 843 FXGKPXAXVPPXKXPXPGXXPP 908
G P PP PG PP
Sbjct: 330 MGGMPPP--PPPGMRYPGGMPP 349
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = +3
Query: 663 LPTPCPIYXRIGPSPTPSXRXGL*PGXXPHXLTXMKXPXXXPRXIGXPSXRPXXEXSSVX 842
+P P P + P P P G+ P P P P G P P
Sbjct: 283 MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPG 339
Query: 843 FXGKPXAXVPPXKXPXPGXXPP 908
G P PP PG PP
Sbjct: 340 MGGMPPP--PPPGMRYPGGMPP 359
>Z27079-13|CAA81597.2| 195|Caenorhabditis elegans Hypothetical
protein T05G5.10 protein.
Length = 195
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 288 FPRS-RGTRREEHHLLRNRPCTXPEPLSTTNRGNXFVAHLELVFN*IVPTYK 136
FP+ R+ EH ++R RPC E +ST+ G A + +V I T K
Sbjct: 56 FPKQCSALRKNEHVMIRGRPCKIVE-MSTSKTGKHGHAKVHMVAIDIFTTKK 106
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/86 (25%), Positives = 34/86 (39%)
Frame = +3
Query: 459 AACRPRGTPSPAH*GSPQPQGXXREDDPXHVRNIQHARHVRRHPKPCSRCTRPGPYHRVS 638
A CR R P+ QPQ + H+ + A P P + +P P+H ++
Sbjct: 1937 AVCRERPHPTTVISPPQQPQ----QPKKMHIPPVTRATSP---PPPAQKSPQPAPFHSIT 1989
Query: 639 CLXSGXRCLPTPCPIYXRIGPSPTPS 716
S P P P+ +G P P+
Sbjct: 1990 EPLSD---YPVPPPLGSLVGLPPMPA 2012
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -2
Query: 413 LVTIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITALMAGPSHDRGEHGARSIISCETG 234
L I S+G L PLLL A + P+ T+ +++G S H ++S+ S G
Sbjct: 166 LTGIVGSLGSLAPNFPLLLVARFIQGSCYTPLTTVNYVLSGESI---PHRSQSLTSIFFG 222
Query: 233 LAHXRSHCLL 204
++ +C L
Sbjct: 223 VSWVCGYCFL 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,098,968
Number of Sequences: 27780
Number of extensions: 395221
Number of successful extensions: 1166
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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