Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_P17
(850 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18198-1|CAB38253.1| 485|Homo sapiens ONECUT-2 transcription fa... 32 2.3
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 25 2.4
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 27 4.0
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 27 4.0
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 27 4.0
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 27 4.0
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 26 5.0
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 26 5.0
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 26 6.5
>Y18198-1|CAB38253.1| 485|Homo sapiens ONECUT-2 transcription
factor (OC-2) protein.
Length = 485
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 820 GGGGGGGGPXXXXXXXXXXXXXXXKKXXXGGXPPPPPP 707
GGGGGGGGP ++ G PPPP
Sbjct: 28 GGGGGGGGPGHEQELLASPSPHHARRGPRGSLRGPPPP 65
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +2
Query: 719 GGXPPPXXFFXXXXXXXXXXXXXXXGPPPPPP 814
G PPP F GPPPP P
Sbjct: 197 GDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVP 228
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 794 GPPPPPPPP 820
GPPP PPPP
Sbjct: 231 GPPPGPPPP 239
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 26.6 bits (56), Expect(2) = 4.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 798 PPPPPPPP 821
PPPPPPPP
Sbjct: 375 PPPPPPPP 382
Score = 23.4 bits (48), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 795 GPPPPPP 815
GPPPPPP
Sbjct: 357 GPPPPPP 363
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 26.6 bits (56), Expect(2) = 4.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 798 PPPPPPPP 821
PPPPPPPP
Sbjct: 375 PPPPPPPP 382
Score = 23.4 bits (48), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 795 GPPPPPP 815
GPPPPPP
Sbjct: 357 GPPPPPP 363
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 26.6 bits (56), Expect(2) = 4.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 798 PPPPPPPP 821
PPPPPPPP
Sbjct: 375 PPPPPPPP 382
Score = 23.4 bits (48), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 795 GPPPPPP 815
GPPPPPP
Sbjct: 357 GPPPPPP 363
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 26.6 bits (56), Expect(2) = 4.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 798 PPPPPPPP 821
PPPPPPPP
Sbjct: 375 PPPPPPPP 382
Score = 23.4 bits (48), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 795 GPPPPPP 815
GPPPPPP
Sbjct: 357 GPPPPPP 363
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 26.2 bits (55), Expect(2) = 5.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 795 GPPPPPPP 818
GPPPPPPP
Sbjct: 21 GPPPPPPP 28
Score = 23.4 bits (48), Expect(2) = 5.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 798 PPPPPPPP 821
PPPPPP P
Sbjct: 23 PPPPPPAP 30
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 26.2 bits (55), Expect(2) = 5.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 795 GPPPPPPP 818
GPPPPPPP
Sbjct: 21 GPPPPPPP 28
Score = 23.4 bits (48), Expect(2) = 5.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 798 PPPPPPPP 821
PPPPPP P
Sbjct: 23 PPPPPPAP 30
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 26.2 bits (55), Expect(2) = 6.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 794 GPPPPPPP 817
GPPPPPPP
Sbjct: 21 GPPPPPPP 28
Score = 23.0 bits (47), Expect(2) = 6.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 797 PPPPPPPP 820
PPPPP PP
Sbjct: 24 PPPPPRPP 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,620,561
Number of Sequences: 237096
Number of extensions: 2093052
Number of successful extensions: 52292
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25792
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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